Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            <---------ANAC55(2)               --------->TOE1(2)                                     <---------ICU4                 --------------->AGL15                                     -------->ATHB1                 <---------HSFB2a(2)               <-----------GT1       --------->ATHB51               <---------------AGL15         <---------TOE2(3)          --------->AHL20(1)              --------->HSFB2a(2)         <---------TOE1(3)          <---------AHL20(2)             <-----------------AGL3          --        ---------->DOF2             --------->AHL20(2)             ----------------->AGL3         ---     --------->TOE2(3)              <---------YAB1  --------->CCA1(2)     <---------------AtSPL8 ----   <---------TOE2(3)                --------->ICU4 <---------ARR14(2)     --------->DAG2       <----- <---------AHL20(2)               --------->YAB1   --------->ARR14(2)    ---------->DOF2   <---------ARR11(3)   gaattaatgttaaagttatacaagactataccacaaaaattattacataaacagatatgtgagtcattttctaaaaaaagtacgaagaaacaagatttaa  7741500        --------->AHL20(1)                                --------->At5g28300        <---------AHL20(1)                               ----------->GT1                  --------->YAB1     --------->AHL20(2)                               <-----------GT1                  --------->YAB1     <---------AHL20(2)    --------->ZAT6    ----------->GT1                     --------->YAB1 ------->At5g28300      --------->YAB1      ----------->GT1  ---------->DOF2   --------->AHL20(2) -------->GT1         <-----------GT1 --------->AHL20(2)<---------TOE2(3)     --------->YAB1 ----->ZAT6     --------->ZAT18  ----------->GT1   <---------ICU4             --------->AHL20(2) ------GT1      <---------ZAT18---------->DOF2 --------->AHL20(2)    --------->YAB1 --------->YAB1   cagtaaattatatattagtgcaattttcatcactaaagaaaaaaataagttaaatattacggtaaaagtattcataacaataaaaataagaatcatcgaa  7741600                      --------->YAB1                   --------->YAB1                  <---------YAB1                 <---------AHL20(2)                 --------->AHL20(1)                 --------->AHL20(2)                --------->YAB1            <---------AHL20(2)                                           <---------AHL20(2)            --------->AHL20(2)                                          --------->AHL20(2)            --------->AHL20(1)    <---------ICU4                     --------->ATHB12           --------->AHL20(2)     --------->YAB1----------->RAV1(1)<---------WOX13(1)       <--------   --------->TOE2(3)  <-----------GT1      ---------->DOF2     <----------DOF2              ---------   caaaacatcaaaaaaaaattataataacaagattactcatcacattgaagcaccaaaaaaaacagcttgaatgatttaatctcatcacattcaagatagt  7741700                                              <---------ICU4                                           --------->YAB1                                           --------->AHL20(2)                                        --------->YAB1                                      --------->AHL20(2)                                      --------->AHL20(1)                                          ---                                      <---------AHL20(2)                            <---------ANAC58                                     --------->YAB1                                 <---------ANAC46                                 --------->AHL20(2)                                 <---------ANAC58                                 --------->AHL20(1)                                --------->STY1(2)    <---------TOE2(3)           --------->AHL20(2)                            ------->TEIL  --------- -ARR11(3)         --------->ZAT6<---------AHL20(2)                 <----------DOF2<---------STY1(2) >ARR11(3)<---------YAB1 --------->YAB1<---------YAB1      --------->ZAT6  <---------YAB1  ----------   gagattaatgttctcatcgaaacactataaaaaaaaaaattataataaaaatttcgatctaatactatttctttgtcatgaaactagcttgaattgataa  7741800                   --------->AHL20(2)                 --------->AHL20(2)                --------->YAB1         <---------YAB1   --------->AHL20(2)  <---------ARR11(3)                                                <---------ICU4  --------->AHL20(1)           --------->GLK1(1)              -------->P  <---------AHL20(1)   <---------ANAC55(2)                  <---------MYB111(1) ------>YAB1  --------->AHL20(2)--------->GLK1(2)          <---------STY1(2)               <---------MYB46(3) >YAB1 --------->AHL20(2)      <---------GLK1(1)  ----------------->AGL2            ---------->DOF2 ->GT1 <---------AHL20(2) ---------->DOF2  --------->YAB1  --------->STY1(2) --------->AHL20(2)------   tcaaaatatttatttttaaaataatatgtaaagaaatctgttcaaaaatcactccaaaactagctacccattaatacaaaaaaattcaaagagtcgttcc  7741900                                                                                    <------MYB46(1)                                                                                    <------MYB83                                                                                    <---------ANAC46                                                                                    <---------ANAC58                                                                                    <---------ANAC58                                  <---------RAP2.3(1)                              <---------AtMYB61                                 <---------RAP2.6(2)                               <---------MYB46(3)                                 <---------ANAC46                                  --------->MYB46(2)                             <---------ANAC58        ------>ZmHOX2a(1)  <---------ICU4       <----------DOF2       <---------ANAC58     ------>ZmHOX2a(1)     --------->YAB1       <---------DAG2--------->TOE2(3)      <<<<<<<<<TBF1       ------>ZmHOX2a(1)  --------->MYB111(1) *TSS <---------DAG2 --------->TOE1(3)   <<<<<<<<<TBF1  ------>ZmHOX2a(1)       --------->ATHB12 ------>CBF     <---------ATHB12--------->RAP2.6(3) <---------ALFIN1   --------->ICU4          ------   aatagaccccttttcccaataaaccctaattccttgcggcttcttcttcttcctcctcctccattcctctgtaattatcaaatgtttggtgtttcgatga  7742000                                                                                                    -                                                                                            ---------                                                                                        --------->YAB1              <---------CCA1(2)                                                        <---------ATHB12 --------->TOE2(3)                   <---------At4g35610        --------->DEAR3(1)   --------->WOX13(1) --->YAB1<-----------GT1             --------->At4g35610     <---------ALFIN1   ------>ZmHOX2a(1)   -   gaacattaatctcaccatctcttgctcccttctctcttcatctccataaaccctctctcttctccaccgctcttcgcttctccttctcaatcaacaacat  7742100                                                            ----------->GT1                                                 ---------->DOF2                                                 =================bZIP_DOF                                               --------->ANAC58                     <---------ZAT2  -                                               --------->ANAC58                --------->At4g35610  <                                             --------->MYB52(1)              <---------ICU4      ----                                           <---------MYB52(2)             <---------ICU4      ------>ZmHOX2a(1)                                        <----------ID1  <---------TGA1a  <---------YAB1--------->At4g35610                                      --------->ANAC58  --------->O2   <---------ICU4 --------->RAP2.6(2)   ----------->RAV1(1)                --------->ANAC58  --------->TGA1a--------->YAB1 --------->DEAR3(1) -------->ANAC46  ------>ZmHOX2a(1) ---------->DOF2     <---------O2  <---------YAB1--------->At4g35610 -->RAV1(1)<-----------GT1     ----------->RAV1(1)   <----------ID1 --------->YAB1  <---------At4g35610 ------>GAMYB<---------At4g35610    ==============================bZIP_DOF--------->YAB1<---------ALFIN1   aacccccacaaattcacctccttccaccatttccaccagaaagctacaaacgaaagcgacgagggtaacatcatcatcatcatctcagccgctctcctcc  7742200                 <---------O2                 --------->TGA1a                 --------->O2                 <---------TGA1a                                     <---------ZAT14                 --------->ANAC46                                    --------->ZAT14            --------->ARR14(2)                                       --------->ARR14(2)           --------->GLK1(1)                                         <---------ARR14(2)       <------NtERF2                                              <---------ANAC46      --------->LBD16                      --------->At5g28300  --------->LBD16                   <--      ------>NtERF2              <---------TOE1(2)              ------>NtERF2              --------->At5g28300     --------->LBD16       <------MYB46(1)--------->LBD16      --------->ANAC46        --------->MYB52(1)    <---------LBD16        <------MYB83   ----------->GT1      --------->DEAR3(1)     --------->ARR14(2) -------->At4g35610        <---------DEAR3(2)                 <---------LBD16         <---------ARR14(2) ---------At4g35610       <---------DREB2C(2)       --------->MYB46(3)         ---------->DOF2------- -->ZmHOX2a(1)   --------->bZIP60(2)    <---------LBD16<---------ALFIN1   --------->ANAC46-----------   tcatctcccggcgaaatccacgtcgtagtcggtccaatgttctccggtaaaacaacaacacttctccgccgtatactcgccgaaagagaaaccggtaaaa  7742300                                            <---------ATHB12                                        --------->DEAR3(1)                                       --------->ANAC46                                       --------->ANAC58                                       --------->ANAC58                                    <---------ZAT14                               --------->ARR14(2)                               <---------GLK1(2)          --------->O2       <---------ICU4          <---------ARR14(2)         --------->ANAC46                    =======       --------->YAB1          --------->ARR11(3)         <---------O2                        <------ZmHOX2a(2)      <---------ATHB12         <---------ARR11(3)         ----------->HVH21                  <-------    --------->WOX13(1)       --------->ANAC58    --------->YAB1                            --------->LBD16 --------->ANAC58            --------->ANAC58    <---------ICU4--------->At5g28300        --------->LBD16 --------->ANAC58          <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<---------DEAR3(1)   <-----------HVH21 -------GLK1(2)     ================================================bZIP_DOF   <---------ANAC58------ --->DOF2        ----------->RAV1(1)--------->ZAT18       <---------TGA1a      <---------ANAC58====== >GT1 --------->ICU4---------->DOF2 --------->ZAT14       --------->TGA1a     <---------ZAT2 --------   gaatcgcaatcatcaaatccaacaaagacacaagatactgcaccgaatcaatagttactcacgacggtgagaaatacccttgctggtcactccccgatct  7742400  Previous    Next  AGI:  At5g23070.1    Description:  thymidine kinase, putative. similar to thymidine kinase, putative [Arabidopsis thaliana] (TAIR:AT3G07800.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41206.1); contains InterPro domain Thymidine kinase; (InterPro:IPR001267) Range:  from: 7741901    to: 7742981    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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