Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               <---------ANAC58                                             <-------GAMYB                                             <---------ANAC58                                            <------MYB46(1)                                            <------MYB83                                   --------->ANAC58                                   --------->ANAC55(2)      ---------->DOF2              <---------ANAC55(2)  --------->YAB1      <---------TOE2(3)    --------->MYB59       <---------ARR14(2) --------ICU4     --------->TOE2(3)--------->ANAC58              --------->ARR14(2)              <--- ------>ICU4    <-------TEIL   <-----------GT1                 --------->ANAC58                 ----- -------YAB1 <---------At4g35610   --------->ANAC46            ----------->ARR10               <----- ---->YAB1   --------->At4g35610   --------->ANAC55(1)         --------->ANAC58                <----- -----------AGL15--------->REM1(1) ----------->GT1       <------ZmHOX2a(1)                     ------   ataattagaaaagagagctacattaatgttttttaacacgtaaatttggttgtgaattaggagggaagaaacgcttagagcaaacacattgttggaagat  7728100                                                   <-------TEIL                                                   --------->ZAT14                                                   <---------ZAT14                                               <---------DEAR3(1)                                               <---------At1g77200                                               <---------DREB2C(2)      --------->ANAC58                        <------NtERF2      --------->ANAC58                       <-----------HVH21 ----TEIL                                   <---------DEAR3(1)   <---------ANAC46   --------->ZAT6 ---->CCA1(2)                              <------NtERF2<---------ZAT18   <---------RAP2.6(2)       x ----ARR14(2)                         <-----------RAV1(1)      --------------------->WRI1  <---------ZAT14 ----ARR11(3)                <-----------RAV1(1)<---------DEAR3(2)       --------->RAP2.6(3)      --- --->ARR14(2)          xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  --------->ANAC46 ------>NtERF2  --------->ZAT14   acattgtctagcaatacaatccagacaattcttgttgcaaatgtcgtcgtcggtgcattgccctccatcgtgtatttcggcctctctcactacttcacta  7728200                                <---------MYB52(2)                                    --------->AHL20(2)                                --------->MYB46(3)                         <---------LBD16                              --------->ANAC46                           --------->ZAT14                             --------->MYB46(3)                          <---------ZAT14                           -------->P                                    <---------SPL7                    <----------DOF2      <------ZmHOX2a(1)              <---------ANAC58       <----------DOF2  <---------At4g35610                             <---------ANAC58      --------->MYB52(2)--------->At4g35610      <---------AHL20(2)    <---------------AtSPL8  <----- xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   --------->TOE2(2)                 <---------------AtSPL3  ------ ------>ZAT6   <---------At4g35610   --------->TOE1(2)            <---------YAB1      <---------AHL20(2)   actctcgttctttgttccgatgctttagctacccacaaacctaggacatttttaatctaacaaatatcaatattgtgtacgggtatatataaatcgacta  7728300                                                                                      <---------TOE2(3)                                                                                      <---------TOE1(3)                                         <---------TOE2(3)                 <------MYB46(1)         <-----------GT1    --------->YAB1                       ------->MYC3        ---------->DOF2-      --------->YAB1        <---------ICU4----------->GT1        <-------MYC3       <---------AHL20(2)   <----------DOF2        --------->ARR11(3)    --------->AHL20(2)----------->HVH21<---------AHL20(2) ----HSFB2a(2)     --------->ZAT6        <---------TOE1(3)     ------->TEIL<------MYB83   ----------- --->HSFB2a(2)----------->GT1           ---------->DOF2   ---------->DOF2  <---------ANAC46    ------   gaagtctttaataacattgtaatactaaaatcatggtgtttttaaagttataaaatacaaaaatgcacatgacaatttggtgtaatttaaagttgacaga  7728400                                                                                     <---------ARR11(3)                                                                           <---------YAB1                                                                        --------->ICU4                                                                     <---------YAB1 <---------CCA1(2) ------>TEIL                      --------->ARR11(3)               --------->YAB1 <----------DOF2 >HVH21  ---------->DOF2          <---------ARR11(3)              <---------YAB1  <---------DAG2 --->At4g35610   --------->MYB52(1)     <----------DOF2     ------------>CBF     --------->TOE2(3)   tgtacttacatgaaagagataacagaagtgcaagaagaactactttgctcaacatcattttctccaatatgataattttgattcctttatcttcttgttt  7728500                <-----------GT1             <---------ICU4                    <------------CBF                             ---------            <---------YAB1                    <---------ICU4                                <--------          --------->YAB1                     <---------YAB1                                --------->ARR11(3)         --------->ICU4                <-------TEIL                                        <---------ARR11(3)         <---------YAB1           <-----------TBP                        <---------TOE1(3)--------->HSFB2a(1)    <---------ZAT6           <-------MYC3 ------------>CBF               <---------TOE2(3)<---------HSFB2a(1)  <---------ANAC46           ------->MYC3--------->TOE2(3)     ------->GAMYB       --------->CCA1(2)   tgtttagtgtgatgataatttcgattcaacatgtgtatatatacatcaatattgcaagtttgcaacggcaagtttaaggcaagagatttggaagatttct  7728600                                                                                                   <-                                                                                                   --                      <-----------GT1                                                          <-----  <---------------AGL15             --------->ANAC58                                           <-----  --------------->AGL15         <---------HSFB2a(2)                                           ------- ----------------->AGL2 <---------ANAC55(2)                                                   ------- ----------------->AGL3 --------->ANAC55(2)                                                   <------ >GLK1(1)             --------->AHL20(2) <---------GLK1(2)                                    <------ -GLK1(1)       ------>ZmHOX2a(2)   --------->ANAC58<-----------GT1     <-------TEIL      ---------->DOF2   cataccctatatagatgatcgaaattacataattttggaagcaaattcttgttttgaccagtttgaaatacaaattcatgtattcgaaccagaaaagata  7728700                                                                                     --------->ANAC58                                                                                     --------->O2                                                                                     --------->ANAC46                                                                                     --------->ANAC58          ------->TEIL                                                               --------->bZIP60(2)   <---------AHL20(2)                                                        <-----------GT1   <-----------GT1                                                      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) --------AHL20(2)                                                      <---------CCA1(1) ------->AHL20(2)                                                      <---------RVE1(1) ----RVE1(1)                                                          --------->ARR14(2) ----CCA1(1)                                   --------->GLK1(1)      <---------ARR14(2) -->AHL20(1)                                   <---------GLK1(1)      --------->ARR11(3)            - -->ARR11(3)           <------------CBF    --------->HSFB2a(2)        <---------ARR11(3)            < ---ARR11(3) <---------AHL20(2)            <---------HSFB2a(2)       <------ZmHOX2a(1)         <xxxxx ---AHL20(1) --------->AHL20(2)  <----------DOF2        ------->TEIL----------->GT1<---------ALFIN1<-   tttatttacatgtatataatttagaaattgtttctcttttaacatcgagaaatccatgtatgtgaatgtgaggatatttttactaccacgttacaacgtt  7728800                                                               --------->At4g35610                                                             <-----------GT1                      <--                                                        <----------DOF2                           <--          --------->LBD16                               <---------DAG2                           ----         --------->ANAC58                              <---------ANAC58                     <xxxxxxxx         --------->ANAC58                              <---------ANAC58                   ------->TEIL         xxxxxxxxxxxxxxxx>smallRNA(i)           --------->ATHB12                       xxxxxxxxxxxxxx         <---------ANAC55(2)                   <------ZmHOX2a(2)                       --------->AtLEC2        <---------LBD16                       --------->ARR11(3)                     <---------ANAC58       --------->CCA1(2)                      <---------ARR11(3)                 xxxxxxxxxxxxxxxxxxxx -------->HSFB2a(2)                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    <----------DOF2 xxxxxxx ---------HSFB2a(2)           <---------YAB1 --------->GLK1(1) ----------->RAV1(2)   <---------ANAC58 xxxxxxxxxxxxxxxxxsmallRNA(fl3)    --------->TOE1(2)  ---------->ID1        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2) --------LBD16              --------->YAB1   <---------GLK1(1) <---------At4g35610  xxxxxxxxxxxxxxxxx   tttcggaagacacgggaaacgagtatcaattcatgatactgcgagggagatcatttggctttttcacctgaaatgagttcctttatagcatgcacatagt  7728900                                                               <---------CCA1(1)               --------->TOE2(3)                               <---------RVE1(1)              <--------HAHB4                       --------->AHL20(2) ----MYB46(1) --------->YAB1            <---------YAB1        <---------ARR11(3) ----MYB83   <---------YAB1        <---------AHL20(2)         --------->ARR11(3) ----->MYB111(1)                  --------->AHL20(2)        <---------TOE2(3) xxxxxxxxxxxxxxxsmallRNA(i2)  <---------YAB1       <---------AHL20(2)             <---------AHL20(2)- xxxxxxxxx>smallRNA(si3)--------->AHL20(2)        <---------AHL20(2)           <xxxxxxxxxxxxxxxxxxxxx xxx>smallRNA(i2) --------->YAB1  <---------AHL20(2)   <---------MYB46(3)   --------->HSFB2a(2)<----- xxxxxxxxxxxx>smallRNA(se3) <-----------GT1    --------->AHL20(2)        ------->TEIL ----------->GT1 xxxxxx>smallRNA(i2)    <---------AHL20(2)     <---------AHL20(2)     --------->ANAC55(2)xxxxxxxxxxxx   tggtactcatagagtatcattaacaattttttactattaattttgatatttatttatttgttgagattttttatgtatcgagaataaatcgtttatagtg  7729000  Previous    Next  AGI:  At5g23035.1    Description:  contains domain PROKAR_LIPOPROTEIN (PS51257) Range:  from: 7728023    to: 7728458    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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