Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         --------->AHL20(1)                       <---------AHL20(1)                       <---------AHL20(2)                                                          <x                      --------->YAB1                                                              xxx                      <---------AHL20(2)                  <----------DOF2                      <xxxxx                      --------->AHL20(2)              <---------TOE2(2)                     xxxxxxxxx                  --------->AHL20(2)                  <---------TOE1(2)               ---------->DOF2                  --------->AHL20(1)            --------->ARR14(2)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                  <---------AHL20(2)            <---------ARR14(2) xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)           <----------DOF2                --------->TOE2(3)      ---------->DOF2   <xxxxxxxxxxxxxxxxx   caaaagaatttttctttgaattaattatattgagttgagttctaccttcatattcgtaggcttttttcaaagagcatccaaacttagcaaaagatgactt  7684700                            <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                            <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                           <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                           <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                           <xxxxxxxxxxxxxxxxsmallRNA(i)                         xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                         <xxxxxxxxxxxxxxxxsmallRNA(i)                        xxxxxxxxxxxxxxxx>smallRNA(i)                      ------>NtERF2                      xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                   xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)               <---------SPL7 <xxxxxxxxxxxxxxxxsmallRNA(i)              xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)             <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)             xxxxxxxxxxxxxxxx>smallRNA(i)             xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)            <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)          <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)          xxxxxxxxxxxxxxxx>smallRNA(i)          <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)            <xxxxxxxxxxxxxxxxsmallRNA(i)         <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)           <---------ZAT18         xxxxxxxxxxxxxxxxxxx>smallRNA(si3)      --------->HSFB2a(2)        <---------MYB52(1)<xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)       <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)       <xxxxxxxxxxxxxxxxsmallRNA(i)       xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  <---------At4g35610    --------->ANAC58      <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxx>smallRNA(i)      <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                       <--      xxxxxxxxxxxxxxxx>smallRNA(i)       xxxxxxxxxxxxxxxx>smallRNA(i)                             <--     <---------LBD16 xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<xxxxxxxxxxxxxxxxsmallRNA(i)           -------    xxxxxxxxxxxxxxxx>smallRNA(i)        xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                    -------  xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   <----------DOF2<---------ZAT14    ---------->DOF2     <xxxxxxx xxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <---------DAG2 --------->ZAT18---------->DOF2      xxxxxxxxxxx xxxxxxxxxxxxxxxxx>smallRNA(si3)   <---------LBD16<xxxxxxxxxxxxxxxxsmallRNA(i)            xxxxxxxxxxx xxxxxxxxxxxxxxxsmallRNA(si3)--------->ZAT14  <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      <---------YAB1 xxxxxxxxxxx>smallRNA(si3)<xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      --------->ANAC58   <xxxxxxxxxxxxxxx xxxsmallRNA(fl3)  xxxxxxxxxxxxxxxxxxxx>smallRNA(i2) <xxxxxxxxxxxxxxxxsmallRNA(i)   ----------->GT1 <   ctatatcaccggtgagtcttacgctggccactacattcccgctttagcttcgcgagtccacaatggaaacgaaaagaaagaagggattgtaataaacctt  7684800                                              <xxxxxxxxxxxxxxxxsmallRNA(s)                                              <xxxxxxxxxxxxxxxxsmallRNA(i)                                             --------->LBD16                                          xxxxxxxxxxxxxxxx>smallRNA(i)                                          ------>NtERF2                                         <xxxxxxxxxxxxxxxxsmallRNA(s)                                         <xxxxxxxxxxxxxxxxsmallRNA(i)                                        xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                        --------->SPL7                                        xxxxxxxxxxxxxxxx>smallRNA(i)                                       <xxxxxxxxxxxxxxxxsmallRNA(i)                                      <xxxxxxxxxxxxxxxxsmallRNA(i)                                      <-----------HVH21                                      <xxxxxxxxxxxxxxxxsmallRNA(s)                                  xxxxxxxxxxxxxxxx>smallRNA(i)                                  <xxxxxxxxxxxxxxxxsmallRNA(i)                                 -------->P  xxxxxxxxxxxxxxxx>smallRNA(fl3)                          xxxxxxxxxxxxxxxx>smallRNA(i)                          xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                         xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                        xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                        xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                       xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                    <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   <xxxxxxxxxxxxxxxxsmallRNA(i)              xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)--------->GLK1(1)              <----------DOF2    <xxxxxxxxxxxxxxxxsmallRNA(i)          <---------CCA1(2)      xxxxxxxxxxxxxxxx>smallRNA(i)                     <---------ANAC46         xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<---------LBD16                        --------->ANAC55(2)         xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxx>smallRNA(i)<xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<------NtERF2 <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<---------ANAC46        --------->ZAT6<---------ANAC55(2)  --------->MYB52(1)<xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <------ZmHOX2a(2)  xxxxxxxxxxxxxxxxxxxx>smallRNA(si3) -------TOE2(3)    xxxxxxxxxxxxxxxx>smallRNA(i)xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<---------ANAC58 -------TOE1(3)  <---------MYB46(3)<xxxxxxxxxxxxxxxxsmallRNA(i)    <------ZmHOX2a(2)      ---------->DOF2 -->TOE1(3)<---------ARR11(3) xxxxxxxxxxxxxxxx>smallRNA(i)         <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3) -->TOE2(3)--------->ARR11(3)<xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   <---------ARR11(3) --------->ATHB12 xxxxxxxxxxxxxsmallRNA(si3)xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    <------ZmHOX2a(1)<---------ANAC58 xxxxxxxxxx>smallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     <x xxxxxxxxx>smallRNA(fl3)xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     xx xxxxxxsmallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  ================HOX2a_HOX2a <---------YAB1<xx xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)----------->RAV1(2)  <---------ARR11(3)<---------YAB1<---------WOX13(1)   aaggtaactgatatatctttggttactgctactgcaacctggtccgccggataaccagatcacaacaggatcactactattgtttcgtgattgaaagaag  7684900                             <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                         <---------LBD16               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)              xxxxxxxxxxxxxxxx>smallRNA(i)             <xxxxxxxxxxxxxxxxsmallRNA(i)            xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)           <xxxxxxxxxxxxxxxxsmallRNA(i)                                                <---------At4g35610          <xxxxxxxxxxxxxxxxsmallRNA(i)                     <---------ARR11(3)          --------->At4g35610        ----------->RAV1(2)--------->LBD16                 <---------ARR14(2)         <xxxxxxxxxxxxxx        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)              --------->ARR14(2)        <--------P       <xxxxxxxxxxxxxxxxsmallRNA(i)               <--------P <xxxxxxxxxxxxxxxxsmallRNA(i)       -------->P xxxxxxxxxxxxxxxx>smallRNA(i)   --------->REM1(2)                  <xxxxxxxxxxxxxxxxsmallRNA(i)      xxxxxxxxxxxxxxxx>smallRNA(i)              --------->ALFIN1         xxxxxxxxxxxxxxxx>smallRNA(i)     --------->MYB46(3)  <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<---------ARR11(1)     --------->DAG2    <xxxxxxxxxxxxxxxxsmallRNA(i)              <---------ANAC58      --------->DEAR3(1)<-------TEIL   <xxxxxxxxxxxxxxxxsmallRNA(i)               <---------ANAC46     <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)            <---------ANAC58 <-----------HVH21---------->DOF2 xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<------ZmHOX2a(1) <xxxxxxxxx xxxxxxxxxxxxxxsmallRNA(i)--------->ANAC46   <------NtERF2<---------CCA1(2)<------ZmHOX2a(2)        x   aaatggaacaacctggctgattttgaacgcggaaggctgaagtagccagcgtgttggcccaaatctttcaccgaaggatcaccaaaggtagatgagagtt  7685000                                  xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                         --------->DAG2                <-----------GT1                       ---------->DOF2              --------->ARR14(2)       <-------TEIL   <------ZmHOX2a(1)         <------NtERF2     xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       --------->ETT(2)  xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)         ---------->ID1 xxsmallRNA(i)     <------ZmHOX2a(1)      <---------AtMYB61  <----------DOF2 xxxxxxxxxxxxsmallRNA(fl3)      <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                          -------   gagagaagatgcaaactatgaggaggaaagggagagagaaggttttggtcgccatattttcttctttgtattacgaacgagagagaagatgaagaaagtt  7685100                                                                                           <---------LBD16                                                     <---------AHL20(1)          ------>MYB46(1)                                                     --------->ARR11(3)          ------>MYB83  <---------TOE1(3)                                 <---------CCA1(2) --------->ANAC46   <-----------GT1  <---------TOE2(3)------>ZmHOX2a(2)  <---------ANAC58     <---------ANAC58    ------->GAMYB -------- ---------->DOF2 <---------ARR11(3)   <---------ANAC46     <---------ANAC58    <---------MYB59 ------ ----->MYB.PH3(2)--------->ARR11(3)   <---------ANAC58 <------------CBF     --------->MYB52(1) <-----   tgttaaagtttttgtatttgatcttagaaatgaaaacagagcgtgaacaagctcatatattgcttaagttatccgactcaaccgaactattaaaccggat  7685200                       ----------->GT1                                                  --------->ANAC58                   --------->ATHB12                                                     --------->ANAC46                  <---------ATHB51                                                      --------->ANAC58            --------->ZAT14   -------->HAHB4                                          --------->ZAT6            <---------ZAT14   --------->YAB1                                        <-----------GT1          <---------------AtSPL3                   --------->ANAC58             -------->HAHB4          --------------->AtSPL8                   --------->ANAC46             --------->ATHB12     <----------DOF2<------------CBF               --------->ANAC58            <---------ATHB12 ->LBD16 <---------ANAC46  --------->YAB1 <---------YAB1--------->O2           --------->ICU4     <-- --->ARR14(2)     <---------YAB1          --------->ICU4--------->ANAC46<------ZmHOX2a(1)         --- ----ARR14(2) --------->SPL7 <---------YAB1      --------->ZAT6    <----------DOF2<---------WOX13(1)   actattactttctgtgtacgataattggataataatagagagtgatgatgaacactccacgagtctatgctttaggagtaaatgattaacactccacgag  7685300                        <---------ANAC58                        <---------ANAC58                        ----------->GT1                        <------MYB46(1)                        <------MYB83                        <---------ANAC46                       --------->MYB46(2)                       <---------AtMYB61          ----------->GT1                                >>>>>>>>>>GT-3b       --------->ICU4         <------ZmHOX2a(1)                            --------->ANAC58         ------>ZmHOX2a(1)    <---------REM1(1)  --------->MYB111(1)    ------------>CBF     ---------->DOF2     <----------DOF2 <-----------RAV1(1)   <---------MYB46(3)     ----------------->AGL1           <---------YAB1   <---- -------ARR14(2)  <---------TOE2(3)        --------->GLK1(1)    --------->At4g35610 <-----------GT1 ------>ARR14(2)  <---------TOE1(3) ------>ZmHOX2a(1) --------->ANAC58     <---------ZAT18 <---------   tatatgttgtaggagtaaataaggtttggtgtaatgtccttaccgatttccaatgcaagaaaaataagctaaagcagtgtccttattgactttcttttct  7685400                                            -------->HAHB4                                            <---------AHL20(2)                                            <---------ICU4                                           <---------ATHB51                                           <---------YAB1                                      --------->YAB1                             <---------ICU4--------->ICU4                      <---------ZAT6  --------->TOE2(3)                      ----------->GT1<<<<<<<<<ARR1                    <---------ANAC58                <---------AHL20(2)   <<<<<<<<<ARR2                    <---------ANAC58               --------->AHL20(2)   --------->GLK1(2)              --------->GLK1(1) ------DOF2  --------->ARR11(3) --------->YAB1               <-----------GT1--------->YAB1 -DOF2       <---------ARR11(3)<---------YAB1               <---------YAB1 <---------YAB1         ---   ttttttgttgttagagattttatagtgttatttatgacaatcttaattattcatatatgtttataactgatttcttgatcataagttttatttatcgaga  7685500                                                                                                    =                                                                                                    <                                                                                                -----                                                                                      ------>ZmHOX2a(2)                                                                                      ===============                                                                                     <------ZmHOX2a(2)                                                                                     ================                                                                                    --------->GLK1(2)                                                                                    --------->ARR14(2)                                                                                    --------->ARR11(3)                                                    --------->O2                    <---------ARR11(3)                                    ==========================bZIP_DOF           --------->ANAC58 <--                      --------->AHL20(2)            <---------TGA1a<---------ANAC46 <-----------ARR10                      <---------AHL20(2)            <---------O2   ----------->GT1  <---------ARR14(2)                     --------->AHL20(2)   <-----------HVH21   <---------ANAC46   --------->ANAC58 <-- ------>AHL20(2)  --------->ICU4    <----------DOF2 <---------ANAC46         --------->ANAC46  ------   ttaaaaaacaattcttggcaatatttaattcgatgagtcttttctgtcatatagacgtggacttgtgtttagtatatagacacaaggatctatctccccg  7685600  Previous    Next  AGI:  At5g22960.1    Description:  serine carboxypeptidase S10 family protein. Identical to Putative serine carboxypeptidase-like 54 precursor (SCPL54) [Arabidopsis Thaliana] (GB:Q9FFB2); similar to SCPL48 (serine carboxypeptidase-like 48), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT3G45010.1); similar to putative serine carboxypeptidase precursor [Gossypium hirsutum] (GB:AAL67992.1); contains InterPro domain Peptidase S10, serine carboxypeptidase; (InterPro:IPR001563) Range:  from: 7684017    to: 7685055    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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