Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <-----                                                                                         --------->ANAC58                                                                                         --------->ANAC46                                                                      <----------DOF2    --------->ANAC58                                                                      --------------->AGL15    ------                                            <---------YAB1            <---------------AGL15  --------                  <----------DOF2     <----------DOF2             <----------DOF2 <--------HAHB4<----               <---------AHL20(2)     <---------DAG2           <-----------GT1    --------->ATHB51  <               <-----------GT1     <-----------GT1        --------->AHL20(2)      <---------ICU4<----       <---------TOE2(2)       --------->TOE2(3)          <---------AHL20(2)     --------->ICU4<-----   agtgtttcatatgttattaactttcacttagtacattaaactttttctaatagaatataaaaaaataactttctttttaatgcataattacaagtaagat  7664600      <-----------GT1 ----AHL20(1)                        <---------DAG2 --->ARR11(3)                 <----------DOF2               --------->ZAT6 --->ARR10---------->DOF2------->TEIL<----------DOF2     <-----------GT1 -----CCA1(1)            --------->GLK1(2)          <---------AHL20(2) ---------AHL20(2)      <---------GLK1(2)          --------->AHL20(2)        <---------TOE2(3)   ---- -----RVE1(1)           <---------ARR14(1)         <---------AHL20(2)     <---------YAB1 >>>>>>>>>SARD1 ----ARR11(3)   <---------ETT(1)  <-----------GT1  <---------AHL20(1)  <---------YAB1    >>>>>>>>>CBP60g   attttttttaacaaaagtccgacaacgaatctcttttcacttttcattttcaattttttttacctctagttttctcattaatgttgatgaaatttggctc  7664700                                                         --------->AHL20(2)                                                     --------->AHL20(2)                                                    <---------YAB1                    <---------AHL20(2)        --------->AHL20(2)                    --------->AHL20(2)    <---------AHL20(2)                    <---------AHL20(1)  --------->ANAC55(2)                 ------->TEIL   <-----------GT1  <---------AHL20(2)              --------->ANAC55(2)       ----------->GT1  <---------AHL20(2)      --------->GLK1(1)      <-----------GT1          --------->AHL20(2)<---------YAB1               <---------ATHB12      -     <---------AHL20(2)  --------->AHL20(2)   <---------AHL20(2)         <---------At4g35610        -     --------->AHL20(2)  <---------AHL20(2)  --------->ICU4      --------->ANAC55(2)        <------ZmHOX2a(1) ------->HVH21<---------ANAC55(2)       <---------ANAC55(2)      <---------ANAC55(2)  <--------------   tgactaattaactattatgtattttatttaaaattaactattatgtaattttttattatttaaaattatgtattctgctaatgaattccaattaggagta  7664800                                                                                        --------->ICU4                                                                                        <---------YAB1                                                                                      -------->HAHB4                                                                                     <---------ATHB51                                                                                  <---------AHL20(2)                                                                                 --------->AHL20(2)                     <-----------GT1                                         --------->TOE2(3)                 --------->ARR11(3)                                  --------->TOE1(3)--------->YAB1                 --------->AHL20(1)                                  ----------->GT1 --------->ICU4 -------->TOE1(3)<---------ARR11(3)         --------->AHL20(2)       --------->TOE2(3)<---------ICU4 -------->TOE2(3)<---------AHL20(1)         <---------AHL20(2)      ----------->GT1--------->YAB1 -AGL15    ----------->GT1          ----------->GT1        <----------ID1 <-----------GT1   aaccataaacaagtggaaaaatatttctgtttattaagaagaaaatttatatttagcaaaaaaaacaaaaacgttaaaacctttttaataatgagtatgg  7664900                                   <---------At4g35610                               --------->ALFIN1                               <-----------RAV1(1)                                   <----------DOF2                             <---------ANAC46                                   <------------CBF                             <---------ANAC55(1)                               --------->ATHB12                             <---------ANAC58                         --------->YAB1 <---------DAG2                       --------->ARR14(2)                            <---------YAB1 <---------ANAC58                       <---------ARR14(2)                           <---------ARR11(3)                       --------->ARR11(3)                           --------->ARR11(3)                  --------->AHL20(2)                           --------->AHL20(2)   <---------ANAC58                 --------->AHL20(2)--------->At4g35610         <---------AHL20(2)<---------WOX13(1)         --------->MYB59     <---------ANAC58              --------->AHL20(2)  <---------ICU4     --------->ATHB12  --------->GLK1(2)                   ----------->TBP    <---------YAB1 <---------MYB46(3)   --------->RVE1(1)                    <---------AHL20(2) --------->ICU4  *TSS   gatttgttgattaggcaaaataaaaaatctggcgtgttgctgagtcatcactcatcttcatataaataaatatcatcaacatgattgctttttcatctct  7665000                                                                                                   <-                       ------>MYB83                                                                <-                       ------>MYB46(1)                   <----------DOF2                         <---                      --------->MYB55(1)           <---------ANAC58 <---------ANAC58           ------                     <---------MYB59               <---------ANAC55(1)                        <------                     <---------MYB46(2)            <---------ANAC58 <---------ANAC58       --------->ARR11(3)                     --------->MYB46(3)            <---------ANAC55(2)                     <---------ARR11(3)              <---------YAB1                       --------->ANAC55(2)<---------MYB52(1)  <---------GLK1(1)      ------>ZmHOX2a(1)--------->MYB52(1)        <-----------GT1 <----------DOF2       <---------YAB1   gcaacttcctctgtttctgattaccaaacgtcgtcaatacatttcttcaaattacgtttcttttattctttcgttactctcaacaaattttgatatctga  7665100                                                                                            ---------                                                                                        <---------ARR11(1)                                                                                        <-----------ARR10                                                                                        <---------ARR14(2)                                      --------->DAG2       --------->AtLEC2             --------->GLK1(2)                       <------ZmHOX2a(2)       <---------GLK1(1)                        ------->TEIL                      <---------ARR11(3)       --------->CCA1(2)                        --------->ARR14(2) -----MYB83 --------->ANAC58         ---------->DOF2     <---------AtLEC2              <---------ARR14(1) -----MYB46(1)        --------->ARR11(3)      --------->ARR14(2)                       <---------CCA1(2) ------WOX13(1)   ---------->DOF2<---------TOE2(3)   --------->GLK1(1)               <---------ANAC58 --->ATHB12 --------->ANAC46     --------->MYB59     <---------GLK1(1)               <---------ANAC58 ---YAB1    --------->ANAC58  <----------DOF2 <---------ARR14(2)                --------->GLK1(2)   ttggtgttgattccaagtaagaaagatcaaaactttaggtaaagtatggatatgggtttccatgaaaatgagcaaaatcaagaatttgcgaatctaatgg  7665200                    <--------P                 --------->LBD16                <---------ANAC55(2)                <---------ANAC58                <---------ANAC46                <---------ANAC55(1)                <---------ANAC58               <---------LBD16      ------>ZmHOX2a(2)    <---------AGP1----------->GT1      --------->GLK1(2)                                            <    --------->ARR11(3)         <----------DOF2                                                      <    <---------ARR14(2)      <---------ARR11(3)                        <---------AHL20(2)            <    --------->ARR14(2)   <-----------GT1  <----------DOF2        <-------TEIL                 <------ >MYB52(1)  <----------DOF2 --------->ARR11(3)             ---------->DOF2              <---------YAB1   agattggatctgggcattacgggtaaataacatcttttgagtttcttttgagttttgaagctaaagtttcatttttttttttttttgaatttgattatcc  7665300                                                                           <---------WOX13(1)                                                                         --------->ATHB12 ---------ANAC58                                                        <---------YAB1 ---------ANAC46           <---------HSFB2a(2)                     --------->ARR11(3) ---------ANAC58        <---------YAB1           --------->ZAT18   <---------ARR11(3) ---YAB1     <---------AtMYB61                   <---------ZAT18 ----------->ARR10              -----   ttgtgtgtgtgtgtttaggtgttcacattatagaagacgatgcaagattagagcaccatgttgtgatgagatttttgattgcagacattgccacaacgaa  7665400                                                          <---------ANAC58                                                          <---------ANAC58                                                          <---------ANAC46 <---------TOE1(3)                                    <---------ANAC58 <---------TOE2(3) ---------->DOF2             <----------DOF2 -->TEIL         <---------YAB1    <-----------GT1    <---------ANAC58   gctaaggtagaaaactaatattaaaggaatagtctttttacttctctgtctttgtaacttgtgtgtgtgtgtgtgtttttgtgaagaacaagttttggtt  7665500  Previous    Next  AGI:  At5g22920.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G25560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16747.1); contains InterPro domain Zinc finger, CHY-type; (InterPro:IPR008913); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 7664994    to: 7667268    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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