Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                     ------->GAMYB                              -----                                                     --------->DEAR3(1)                         -----                                                    --------->DEAR3(2)                          -----                                                    <------------AtMYB77                        -----                                                    <------------MYB.PH3(1)                    ------                                                  --------->MYB52(1)                          <------                                                  --------->ARR14(2)                          =======                                                  <---------ARR14(2)                   ------>NtERF2    ------>ZmHOX2a(1)             --------->ARR11(3)--------->MYB46(3)                --------->DEAR3(1)   cttctcctccattacaaaaccacattccaaatctaagaactcgtaaacttcgtaaccgccttagtcccttcagaaacagcatgtttcgccaactctccag  7652200                                                                  --------->HSFC1(2)                                                                  <---------HSFB2a(1)                                                                  <---------ZAT2                                                                  <---------HSFC1(2)                       ------->TEIL            <----------DOF2    --------->ZAT2 --------->RAV1(1)     --------->ARR14(2)    <---------At4g35610 --------->ANAC58 ---->ANAC58          <---------GLK1(2)      <------NtERF2   --------->ANAC58 ---->AtLEC2  --------->ZAT14               <---------DEAR3(2)   --------->ANAC58 ---->ANAC58  <---------ZAT14               ------>NtERF2    --------->ANAC58                      -- ---->ANAC46  <---------ZAT18 --------->HSFB2a(2)          --------------------->WRI1         ------- --->LBD16 <---------At5g28300<---------HSFB2a(2)     <---------REM1(1)           --------->ANAC58 <- -----RAV1(2)--------->DEAR3(1)            <---------DEAR3(1)--------->ANAC46     --------->ANAC58--- ==========RAV--------->LBD16--------------------->WRI1  ------->TEIL             --------->ANAC46<--   gcaacacaagtctcaccgcagtctgaatctccctagaagtaatcgtcggcttcttgttgtacctcgcaagcttcgaagactcaccagcaagtttctcaaa  7652300                                                   <---------ARR11(3)                     ------>ZmHOX2a(2)                                                   --------->ARR14(2)                    <------ZmHOX2a(2)                                                   <---------ARR14(2)                   <---------AGP1                                                   --------->ARR11(3)                   <---------ARR14(2)                                                  <---------GLK1(1)                     <---------ARR14(3)      --------->YAB1                        --------->GLK1(2)                           --------->ARR14(2)  --------->ATHB12               <----------DOF2  <---------CCA1(2)                     --------->ARR14(3) <---------YAB1                 <---------ANAC58  --------->GLK1(1)                     --------->ARR11(3) ------->GLK1(1)     --------->ATHB12       <---------ARR14(2)    <---------ANAC58     <---------CCA1(2) --->DOF2  ------->TEIL         <---------ANAC58 <---------MYB52(1)     <---------ALFIN1<---------ARR11(3) --------GLK1(1)     <---------ICU4        <---------ARR14(2)     <---------ANAC58 <---------REM1(1) ------>ARR11(3)    --------->ICU4   <---------ANAC58        ------->TEIL         --------->ARR11(3) -------ARR11(3)    <---------YAB1   <---------ANAC58<---------LBD16 --------->REM1(1)----------->ARR10   gatatcattgatgaaactgttcatgattcccatggctttgctggagattccgatatctggatgaacttgcttcaacaccttgaagatgtagatcttgtat  7652400                                                <------MYB46(1)                                                <---------MYB46(3)                                                <------MYB83                                             --------->ZAT2                                             <---------ZAT2                                             <------NtERF2                                             <---------At4g35610                                            ------>NtERF2                                            <---------DEAR3(2)                                            <---------ATERF1(1)                                           --------->RAP2.3(3)                                           --------->ATERF1(2)                                           --------->RAP2.3(2)                                           <---------ATERF1(2)                                           --------->DEAR3(1)                                           <---------DEAR3(1)                                          <---------LBD16                                          --------->ORA47(2)                                          <------NtERF2                                          --------->RAP2.3(1)                                          --------->ATERF1(1)                                          --------->DEAR4(2)                                          --------->ERF1                                         <---------RAP2.3(1)                                         <---------DEAR4(2)                                         <---------RRTF1(1)                                         <---------RAP2.6(1)                                         <---------ATERF1(1)                                         ------>NtERF2                                         <---------ERF1                                         --------->ABI4(2)             ------>NtERF2                                        <---------DEAR3(1)           <---------LBD16                <                                        --------->DEAR3(1)        <----------DOF2                  <-                                       --------->RAP2.6(1)       <---------ANAC58                  <-                                       --------->RAP2.3(1)       <---------ANAC58               -----                                       --------->ATERF1(1)     --------->GLK1(2)                -----                                       --------->RRTF1(1)    <---------HSFB2a(1)                <----                                       --------->ERF1        --------->HSFB2a(1)                <----                                      ------>NtERF2          --------->HSFC1(2)                <-----                                      --------->LBD16        <---------HSFC1(2)              ------>NtERF2                         <<<<<<<<<TBF1<---------ATERF1(1) --------->LBD16 <----------DOF2    --------                  ------>ZmHOX2a(2)  <---------DEAR3(1)  <---------HSFB2a(2)                 <-------                --------->ARR11(3)   --------->ANAC46   <---------LBD16--------->LBD16    ------>NtERF2            <----------DOF2         <---------LBD16    <---------LBD16<---------RAP2.6(2) <---------At4g35610            --------------------->WRI1<---------RAP2.3(1)--------->HSFB2a(2)             <-----------RAV1(1)   gtctcaacgttcttctttgatctcttcttcttcttgtctccggcgccggctggttccttcgggagtttctttccggcttttggtttcttctctgccgctg  7652500           ------>NtERF2        --------->At4g35610        <---------At4g35610      <---------RAP2.6(2)      <---------DEAR3(1)    --------->ARR14(2)  <---------MYB46(3) ---------ANAC46                                     <---------At4g35610 --------At4g35610                                   --------->At4g35610 --------ZAT2                               <---------MYB46(3) ---->ZAT2 --------->MYB52(1)             <---------MYB52(1) ---->At4g35610           ------>NtERF2  <---------At4g35610 -----ZAT2----------->HVH21              --------->LBD16 -----At4g35610<------NtERF2             --------->At4g35610 ------RAV1(1)--------->LBD16          <---------LBD16       --------->ANAC46 ->At4g35610 <---------ANAC46 <---------MYB52(1) <---------ANAC58 --At4g35610<---------LBD16  <---------DEAR3(2)  <---------ANAC58          <----------DOF2   ctgctggttcggctgccggagttttctctgccggtttcttctccgctggtttcttatctgccttcgccattttcaaacttttctagggagtgagtttttt  7652600                                                                                       --------->ARR14(2)                                                                                     ----------->ARR10                                                                                     <---------TOE2(3)                                                                           <---------YAB1                                                                          ------>ZmHOX2a(2)                                                                         --------->CCA1(2)                                                                         <------ZmHOX2a(2)                                                                         <---------At4g35610                                                                        <---------ARR11(3)                                                                        --------->ARR14(2)                                                                        --------->ARR11(3)                                                                        <---------ARR14(2)                                         <---------ANAC58               <---------AGP1 <---------ARR14(2)                                         <---------ANAC58               --------->AGP1 --------->ARR11(3)                                         <---------ANAC46              --------->GLK1(1)                         *TSS    --------->HSFC1(1)--------->AHL20(2)  <---------GLK1(1)         <---             --------->ATHB12    --------->HSFB2a(2)                  ----------->ARR10<---------ARR11(3)            <---------YAB1       <---------HSFB2a(2)              <------ZmHOX2a(1)  <---------YAB1      <---------AtMYB61  <---------MYB52(1)        <-----------TBP==============HOX2a_HOX2a   -------   ----------->HVH21   <---------ZAT6<------------CBF             ===============HOX2a_HOX2a  =======   ttgctgtgatggttttgatttgatactgttatcttcgagaattgtgtgtttgtttatataagagaataggaagagatctgattagttaagatactgaaac  7652700                 --------->CCA1(2)                --------->ARR11(3)                --------->ARR14(2)                <---------ARR14(2)           --------->ALFIN1         <---------ANAC58         <---------ANAC55(1)         <---------ANAC46         <---------ANAC58         <---------O2         --------->TGA1a         <---------TGA1a         --------->O2      ----------->TGA1      ----------->HVH21     <-----------HVH21    <---------ANAC58                                            ------>ZmHOX2a(2)    --------->ANAC55(2)                                        <------ZmHOX2a(2)    <---------ANAC55(1)                                       --------->ARR11(3)    <---------ANAC46                                          <---------AGP1    <---------ANAC55(2)                                       --------->AGP1---------->DOF2    <---------ANAC58                                          <---------ARR11(3)   <-------TEIL <---------ARR11(3)                            <---------ARR14(2) <---------ARR14(2)     <---------ZAT14                       --------->ARR14(2) --------->ARR14(2)<---------YAB1                      <------MYB46(1)   <----------DOF2 ------LBD16  ----------->ARR10                        <------MYB83   <-----------GT1        <------- --->DOF2<---------bZIP60(2)                           <---------MYB46(3)--------->TOE2(3)  --------- ==================bZIP_DOF                <---------AtMYB61 <---------CCA1(2)   --------->LBD16    <   gcggatgcgtgacgtggagatatgagtgctgttcgatgaagggttttggtgaatggatggttcagatctattttactttaatgcgcgagtgattttaaat  7652800                                       <----------DOF2                                         ------                                       <---------DAG2                                          <-----                                    <---------ANAC46        <-------TEIL          ===================                                <-------GAMYB      --------->LBD16          ----------->GT1  <-------                          --------->HSFC1(2)       ------>NtERF2        ---------->DOF2      <-------                          <---------HSFB2a(1)     --------->ANAC46      ============================= --AHL20(2)               <---------HSFC1(2)      --------->ANAC58    <------NtERF2--------->DAG2 >AHL20(2)   ----------->GT1   <-----------RAV1(1)--------->ANAC58   --------->RAP2.6(2)     <------- ----------DOF2           --------->HSFB2a(1)    <---------LBD16---------->DOF2   ---------->DOF2  <-   ttctttttcgaaatattgaaaaattcgaattttctgttgcgctttttgttatccgccataagttcatgaagcggcaaagagagaaaaagtttttggcgtg  7652900      <---------ANAC58      <---------bZIP60(2)      ====================bZIP_DOF      --------->bZIP60(1)      <---------ANAC46      <---------TGA1a      <---------ANAC58      --------->O2      --------->TGA1a      <---------O2     ----------->STF1    <---------TGA2(2)   ----------->HVH21   ----------->TGA1                                                ----------->GT1 --------->At4g35610                                   <---------ARR11(1) <---------At4g35610                                   --------->ARR14(2) --->ALFIN1                                            ------->TEIL<------MYB83 -NtERF2--------->ALFIN1                               <---------ARR14(2) ===============bZIP_DOF                              <---------ARR14(1)                          <-- --ANAC58      <----------DOF2      ------->TEIL  <---------At5g28300           <-----------GT1<----- --ANAC46----------->GT1           --------->MYB52(1) <---------CCA1(2)     <---------DAG2    <------ ===============bZIP_DOF  <---------ETT(2)  --------->YAB1         <------MYB46(1) <---------CCA1(2) --ANAC58<---------MYB46(3)      <---------ATHB12<-----------GT1  --------->MYB59  ------>ZmHOX2a(1) --------GLK1(1)      ------>ZmHOX2a(2)    <---------YAB1    ---------->DOF2<----------DOF2   -------   gatagctgacgtggttacttttgatccgtctaccaatgaacggctatgattttaccgtatctacaaagttggtaacaactttttcctatctaacattttt  7653000                                                                     <---------YAB1                                                                  <---------------AGL15                                                                  --------------->AGL15                                                                  <---------DAG2                                                                  <----------DOF2                                                                 <-----------------AGL3                       --------->YAB1                           ------>MYB83                      <---------YAB1                            ------>MYB46(1) -------TOE2(3)       --------->ICU4                          ------->GAMYB ----YAB1           <--------HAHB4                           --------->MYB46(3) ---AHL20(2)        <---------ICU4                         <-----------GT1   <-------TEIL -->AHL20(2)       --------->ICU4         --------->YAB1--------->YAB1      --------->CCA1(2)   atggaaatgaagaactaatgcataattataagttttcaactctttcaaaattcttcaaaaataaccaactttttatagatacaaattttgaatttctcta  7653100  Previous    Next  AGI:  At5g22880.1    Description:  H2B/HTB2 (HISTONE H2B); DNA binding. Identical to Histone H2B.10 [Arabidopsis Thaliana] (GB:Q9FFC0;GB:Q96516); similar to HTB1, DNA binding [Arabidopsis thaliana] (TAIR:AT1G07790.1); similar to unknown [Populus trichocarpa] (GB:ABK92758.1); similar to unknown [Populus trichocarpa] (GB:ABK94031.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone H2B; (InterPro:IPR000558) Range:  from: 7651960    to: 7652625    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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