Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              ---------->DOF2                           ----------->GT1  <----------DOF2                          ------>MYB46(1)                            <------ZmHOX2a(1) --------ARR11(3)                          ------>MYB83                              ----------->GT1 --------ARR11(1)                        --------->TOE2(3)                     ------->GAMYB ----->TEIL                              <---------MYB59                      <------------AtMYB77  < -------CCA1(2)                     <---------ATHB12                         --------->At4g35610    - -->HVH21               <---------MYB59------->TEIL    --------->TOE1(2)     <---------At4g35610   <-   gtatctttgtttcatctacattcttatctaactccctaatcaacctaatagctctaacattcgattgcattggcattgcaactgcgaaggataaatctcc  7587800                           <---------GLK1(2)                           --------->ARR14(2)                           <---------ARR14(2)                       <---------At4g35610                       <---------LBD16                       --------->At4g35610                     <-----------RAV1(2)             --------->AtMYB61  --------->ANAC46      --------->YAB1 ---------->CDC5 ---------ARR11(3) --------->TOE1(3)                         --------->YAB1 -------->ARR11(3) --------->TOE2(3)       <-----------GT1 --------->GLK1(2) --------CCA1(2)--------->ARR14(2)<---------REM1(2)    --------->YAB1----------->GT1             <---   aatatctctaataaaccaaaacctcagcggatactcgacactgaattacctctctaatgagaatcaaaacatagaaaatagaatggagagaattgagagt  7587900                                                                               --------->ICU4                                                                             --------->WOX13(1)                                                                         --------->HSFB2a(2)                                                                         <---------HSFB2a(2)                                                                   <---------------AGL15                                                                   --------------->AGL15                                   <---------At4g35610            <---------ANAC58                                   --------->ZAT2                 <---------ANAC46                                   --------->GLK1(1)              <---------ANAC58                                   <---------ZAT2                 <-----------------AGL2       <---------YAB1     --------->HSFB2a(1)                     <-----------------AGL1  <---------At4g35610    <---------YAB1       ------->TEIL                        <---------At4g35610         <---------DEAR3(1) --------GT1     <---------------AtSPL3 ------>ZmHOX2a(1)    --------->At4g35610     ------->TEIL   <   aaccttctcattcttgaagcatgtacgaatgtttccgagctccttatcaactcgtagtctctccgcttccttgttctggcaattacgaacgtcgctgata  7588000                                                                      <---------TGA1a                                                                      --------->TGA1a                                                                      --------->O2                                                                      <---------O2                                                                      --------->ANAC58                                                                  <---------ALFIN1                                                                 ----------->HVH21                                                                <-----------HVH21                                                               --------->ATERF1(1)                                                              ------>NtERF2                                                              --------->ABI4(1)                                                              <---------ATERF1(1)                                                             --------->ATERF1(2)                                                             --------->RAP2.3(3)                                                             --------->RRTF1(2)                                                             <---------ALFIN1                                                             --------->RRTF1(3)                                                             --------->DREB2C(2)                                                             --------->RAP2.3(2)                                                             <---------ATERF1(2)                                                             --------->DEAR3(1)                                                             --------->RAP2.6(2)                    <                                                            --------->ATERF1(1)                     -                                                            --------->ERF1                         <-                                                            --------->DEAR4(2)                    <--                                                            --------->RAP2.3(1)                   <--                                                            --------->RRTF1(1)                    <--                                                            --------->RAP2.6(1)                   <--                                                            --------->ORA47(2)                <------                                                           --------->At4g35610                <------                                                           ------>NtERF2       <------ZmHOX2a(2)  ---                                                           <---------At4g35610<---------ARR11(3)  <--                                                           --------->ABI4(1)  --------->ARR14(2) <---                                                           --------->LBD16    <---------ARR14(2) <---                                                           <---------ATERF1(1)--------->AGP1<--------                                                          --------->DEAR3(1) --------->At4g35610-----                                                      <---------ZAT2  --------->ANAC46      <--------                                     <---------ARR14(2)   <---------ALFIN1   --------->GLK1(1)<------NtERF2                                     --------->ARR14(2) <---------ATERF1(1)<------NtERF2    ---------                                    ------>MYB83      --------->ZAT2  <---------DEAR3(1)   --------->ATERF1(1)                          --------->ATHB12       <---------At5g28300<---------ALFIN1       <------NtERF2                         <---------YAB1      --------->ARR14(2)--------->bZIP60(2)         <---------ABI4(2)                         --------->ICU4      <---------ARR14(2)<------NtERF2----------->ARR10------>NtERF2                      --------->WRKY18(1)------>ZmHOX2a(1)--------->ANAC46------>NtERF2   <---------ATERF1(1)                     <-----------HVH21  --------->TOE2(3)<---------LBD16 <---------ANAC46--------->ANAC46 ---------LBD16     --------->LBD16 ------>MYB46(1)--------->DEAR3(1) --------->ANAC58  <---------LBD16   aatacggagagacctctcattccggtcatggttgaaccaaatcctcaaatccaccgtgctccgccgcctcacacggcgcagatccaaactcgcggcaccg  7588100 ---------MYB59 ----->ZmHOX2a(2) -----ZmHOX2a(2) -------ARR11(3) -------ARR11(1) -------ARR14(2) ---------ARR10 ---LBD16                                                                       --------->ANAC58 ---At4g35610                                                                   --------->ANAC58 ------>ARR14(2)                                                                ----------->GT1 -------AGP1                           --------->ANAC46                   --------->HSFB2a(2) ------CCA1(2)                         --------->ANAC58                   <---------HSFB2a(2) ------ARR14(1)                        --------->ANAC58                 <---------ATHB12 -ARR14(2)                  --------->At4g35610                     <---------------AGL15 ---->LBD16                 <---------At4g35610                 <---------GLK1(1) -ALFIN1                 ---------->DOF2       <---------HSFB2a(2) ----------------->AGL2  ------>NtERF2 >DEAR3(1)      --------->MYB46(3) --------->YAB1           <------ZmHOX2a(2) --------->MYB52(1)   gatctaactacgagataaaccacagactaaagctgaagcataagcaattcgagagaggtgagatcgaaatcccaatctagaaacggaaaatggcaccttc  7588200                                                    --------->LBD16                                                   <---------ANAC46                                                  <---------LBD16                                                 *TSS                    <----------DOF2                                               ----------->RAV1(2) --------->CCA1(2)                                         --------->CCA1(2)    <---------TGA1a             <----------                            ============================================bZIP_DOF    <----------DOF2                            <----------DOF2  --------->ANAC58 <---------O2       <-----------GT1                         <---------ARR11(3)  --------->ANAC58 =======================================                         --------->ARR11(3)<---------ALFIN1 --------->CCA1(2)   <<<<<<<<<<GT-3b   ---            ---------->DOF2------>ZmHOX2a(2) --------->ANAC46 ======================bZIP_DOF    <----   aatcgaagaaattcaaaaggagagactgatctttggagaagagagacacgcctgcgggagagagacgagagacgacttttatttttctttatttacaact  7588300                                                              --------->LBD16      <---------AHL20(2)                                    --------->MYB46(3) -GT1------------>CBF                              --------->LBD16                    --------->HSFB2a(2) ======bZIP_DOF                                <---------ARR14(2)                     <---------HSFB2a(2) ------>WRKY45                                 --------->ARR14(2)                    --------->REM1(2) ------DOF2 <---------ANAC46             <------------CBF<-----------GT1      <-----------GT1   ttgactattcaattttgtgtaattcagtttttgtctgttttgaaattggaatccgaaattgacccgtcgaaaaacagaattaacgcgtctagacatttgg  7588400                                                         <---------DAG2                                                         <----------DOF2                                                        <---------------AGL15                                                        <---------DAG2                                                        <----------DOF2                                                        --------------->AGL15                                 ----------->GT1       ----------------->AG                             --------->AHL20(1)        <-----------------AGL2                             <---------AHL20(1)        ----------------->AGL1                             <---------AHL20(2)        <-----------------AG <-----------GT1                       <---------ANAC55(2)    --------->ARR14(2)        --------->AHL20(2)                       <---------ANAC58       <---------ARR14(2)        <---------AHL20(2)                       <---------ANAC58 --------->DAG2 ----------------->AGL2    <-----------------AGL2                       <---------ANAC46---------->DOF2 <-----------------AGL1<---------At5g28300 <---                       --------->ANAC55(2)    ------->TEIL           <---------ICU4              <---         <------ZmHOX2a(1)   --------->ARR11(3)   ------>ZmHOX2a(1) --------->ICU4            <------       <---------TOE2(3)    --------->ICU4   <---------CCA1(2) ----------->GT1  <---------At4g35610   actaaatttgaggatttataagtttgcgtaatattttgttaaaaagtgtatccttctgcctttttgggtaatatttatttactgctgtttctggtttcac  7588500                                     <---------WRKY38(1)                                  <----------                                     <---------WRKY12                                  --------->AHL20(2)                                    --------->WRKY18(1)                       ------>ZmHOX2a(1)        <---------YAB1             <--------ZAP1                             --------->TOE2(3)      --------->AHL20(2)           <-----------HVH21                      <---------ARR11(3)      <---------AHL20(2)           --------->At5g28300                    --------->GLK1(2)     --------->AHL20(2)          <------NtERF2                            <---------ARR14(2) -------DOF2                 <-----------HVH21                            --------->ARR14(2) ------DAG2                 <-----------RAV1(1)                           --------->ARR11(3) -----GT1    <---------AHL20(2)<---------ANAC46 <-------GAMYB  ------->TEIL  --------->TOE1(3)-------   tttttcatttatttttaaaatgactgttttctgtcgcggtcaatgcattcagttgtaattcaatgtaccatgagaaaatccttaacaaaaaaaatgtacc  7588600                                     --------->ANAC58                                     --------->ANAC58                                     --------->AtLEC2                                  --------->WRKY18(1)                                 <-----------HVH21                                <---------At4g35610           --------->ARR14(2)  --------->MYB59           <---------ARR14(2) <-----------RAV1(2)         --------->LBD16   --------->TGA1a     --------->GLK1(2)     --------->At4g35610     --------->ARR14(2)    =============================================bZIP_DOF     <---------ARR14(2)    <---------At4g35610    <---------GLK1(1)     --------->MYB59                    <----------DOF2                  <------   ----------->ARR10     <-----------RAV1(2)     <---------At4g35610                          <------ -----AtSPL8  <---------YAB1<-----------HVH21    <---------ZAT2                <-----------TGA1   <-- >TEIL <---------LBD16 <-----------HVH21  <---------ATHB12   <---------DAG2    <-----------HVH21  <--   atgagaaaatccggttatgaattcgggtcaggtcaggtcatgcaatggtttagctggtcccaactttttttttttttttttcgtcagacatggtatttgt  7588700  Previous    Next  AGI:  At5g22770.1    Description:  ALPHA-ADR (ALPHA-ADAPTIN); binding / protein binding / protein transporter. similar to adaptin family protein [Arabidopsis thaliana] (TAIR:AT5G22780.1); similar to Adaptin N terminal region family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF93610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16704.1); similar to putative adapitin protein [Ipomoea trifida] (GB:AAS79593.1); contains InterPro domain Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain; (InterPro:IPR008152); contains InterPro domain Clathrin adaptor, alpha-adaptin, appendage, Ig-like subdomain; (InterPro:IPR013038); cont Range:  from: 7579547    to: 7588249    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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