Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            ----------->HVH21                                                 --------->LBD16                                                <---------HSFB2a(2)              <---------TOE1(2)         <---------YAB1                         <---------HSFC1(1)         --------->ARR14(2)    <---------ICU4                              --------->HSFB2a(2)        <---------ARR14(2)   <---------YAB1                               --------->HSFC1(1)       <---------YAB1 ---->ARR11(3)                                 <---------LBD16        ----------->TGA1 -----ARR11(3)              <-----------GT1  <-----------GT1     <------ZmHOX2a(1)                  -   tcttcatcatcgtgaatgggctcgaacttgtaacgtttgtctggttttttccagaagagtttgacgaggacgatgacgattcccatgtaaaccctctcac  7559700                                                                                    =================                                                                                    <------ZmHOX2a(2)                                                                                   <---------ARR11(3)                                                                                <---------HSFB2a(2)                                                                           --------->At4g35610                                                                           --------->ZAT2                     --------->MYB52(1)                            <----------DOF2 --------->ARR11(3)                 --------->ANAC58                            <-----------RAV1(1)--------->HSFB2a(2)                 --------->ANAC58                         --------->ATHB12--------->ANAC58        <--      ----------->HVH21            <---------At4g35610   <---------ATHB12 --------->ANAC58        <-- --------->DOF2  --------->ANAC46  --------->At4g35610 --------->WOX13(1) --------->ANAC46        <--   ataaaagcatgacagacataagcaaacagatgtaaacagctaattgaagaagagggacaatcactggtgcttttacaagctcccagatcatgcctagttg  7559800                     ------>NtERF2                     <-----------HVH21                    <---------ANAC46                    --------->DEAR3(1)                 --------->ANAC58                 --------->ANAC46      ===============HOX2a_HOX2a      ------>ZmHOX2a(2)     --------->GLK1(1)                        <----------DOF2    <---------ARR11(3)            ------>NtERF2                      ---------->ID1    --------->ARR11(3)<------NtERF2  ----------->RAV1(1)             <-----------GT1 ====================HOX2a_HOX2a  --------->LBD16                   <-----------GT1 -------ANAC58   --------->ANAC58<---------ETT(1)           --------->ORA47(1) -------ANAC58 <---------ALFIN1  --------->ANAC46          --------->DEAR3(1) -------ANAC46------>ZmHOX2a(1) <---------LBD16         <-----------GT1                        ------   gcctgtgatctccatcctcacgccgtcgaatgtctccggcaacacaaactttggtgatacaccgtccatttttccttctctcttctcttctcttagagtg  7559900            --------->ALFIN1          <---------ANAC58          <---------ANAC58        <------MYB83        <------MYB46(1)       --------->MYB55(2)       <---------DEAR3(1)       <---------MYB46(3)       --------->MYB46(2)       --------->MYB111(1)       --------->MYB111(2)       <---------AtMYB61      <---------MYB55(1)      <--------P                      <---------ANAC46    <---------MYB46(3)               <---------AtMYB61    --------->ATHB12              <---------ARR14(2)             <------NtERF2   <---------ANAC58 ----->GT1<---------ANAC46     <---------TOE2(3)        --------->At4g35610      <---------ANAC58  <-   taacaatggttggtgtgtttctctctctacgatgaggttttggtgtaatgggtttatgagatgaggcagagagagagagattgccttgagaaaaatggag  7560000                                      <------ZmHOX2a(1)             <----------DOF2           --------->ZAT14          <---------TOE2(3)    <------ZmHOX2a(1)                  <------ZmHOX2a(1)           <---------ZAT14   <------ZmHOX2a(1)          ----------->GT1            <------ZmHOX2a(1)   <-----------GT1          ----------->GT1       ----------------->AGL2    *TSS -------------------- ---------DOF2     ---------->DOF2--------->TOE1(2)<-----------RAV1(2)  <---------TOE2(3)  ----------   gcttttctctctctacagttctaaagagagaggaaacttaggaagagagagagccagaaggagaaatgtggtttaagggagaagaggaagagaaggataa  7560100                                             --------->AHL20(2)                 --------->ICU4              <---------AHL20(2)                            <---------RVE1(1)                 <---------YAB1             <---------AHL20(2)                            <---------ARR11(3)              <---------YAB1            --------->AHL20(2)                         <---------AHL20(2)       <---------YAB1                   <---------AHL20(1)                <---------WOX13(1)       <---------AHL20(2)         <----------DOF2      <------------CBF  <------------CBF --------->ARR11(3)  <------ZmHOX2a(1)               <---------DAG2       >>>>>>>>>ARR2    --------->ATHB12  <---------GLK1(2) ---->ANAC81----------->GT1    <-----------GT1         >>>>>>>>>ARR1   <---------YAB1   <---------TOE2(3) ->GT1 --------->AHL20(2)---------->ID1 <---------AHL20(2)       <----------DOF2  <---------AHL20(2)   acgaggaatataaatggtgataattttgtttttttactttattttatttatttgtaagattgttttcctttttttgattgattttttatttagatttttt  7560200               ---------->DOF2          ----------->GT1         <---------TOE2(3)                                --------->MYB52(2)         <---------TOE1(3)             ----------->GT1<------MYB46(1)        --------->GLK1(2)       ---------->DOF2               ---------->DOF2  <------MYB83          <---------GLK1(2) <------      --------->ICU4     ---------->DOF2   --------->AHL20(2)        --------->ICU4          <XXXXXXX ----------->GT1  ----------->GT1---------->DOF2<-------TEIL        <----------DOF2 <---------AHL20(2)   agagagtaataaaggttaaaaggaaataaaaggaagaaagaaagaaaaaatacatttggtttgtttgtgtctttatgagattctattttttcagttaatg  7560300                          --------->GLK1(2)                               ----------------->AGL1                  ------->GAMYB                                       <---------ANAC58               --------->MYB52(1)                              --------->ARR14(2)     ----------->GT1     --------->ARR11(3)                    <---------ARR14(2)    --------->HSFB2a(2)  <---------ARR11(3)                    --------->GLK1(2)    <---------HSFB2a(2)----------->ARR10                       <-----------ARR10                    - ---TOE2(3)    ----------->RAV1(1) <-----------GT1 ----------->GT1    <---------ANAC58             <- XXXXXXXXXXXXXMIR779.2<------ZmHOX2a(1)  --------->GLK1(2)    <---------GLK1(2)                    --   aaatttctggtaaaaaacaacagaggagattttggtttttcagtttctgtgttttgttatttcagaatctgtgcctgcccaatgggaagagaagggagag  7560400                                  --------->ARR11(3)                                  <---------ARR11(3)                                 --------->GLK1(1)                                 <---------GLK1(1)                                --------->ARR11(3)                --------->ATHB12                           ------>ZmHOX2a(1)               --------->ATHB12                         --------->YAB1                    <---------ICU4                        <---------YAB1                     -------->HAHB4                       <-----------GT1                     --------->YAB1                     <---------YAB1                       --------->ICU4                  --------->AHL20(2)                      <---------YAB1                        <----                ------->TEIL   --------->YAB1           --------->YAB1                       <-------             <---------ATHB12 <---------ATHB12   --------->At4g35610<---------YAB1          <-------- -------->CCA1(2) <---------AHL20(1)         --------->ANAC46<---------YAB1       <---------ANAC58 --------ARR11(3) <---------AHL20(2)  <----------DOF2   <---------ICU4            <---------ANAC58  < ------->ARR11(3) --------->AHL20(1)  ------>ZmHOX2a(1)--------->ICU4        <---------AHL20(2) <----   agatatagatttctaatgaatttattatcctaatgatatccttttatacacagttgaataatgattagtgattagtgattttatgcgtttttttttaact  7560500   --------------->AGL15   <---------------AGL15  =============================================================MADS_MADS  <-----------------AGL2                                  <---------WRKY38(1)  <-----------------AGL3                                  <---------WRKY12  ----------------->AG                                   <<<<<<<<<<WRKY6  <-----------------AG                            <---------YAB1  ----------------->AGL1                       --------------->AGL15  ----------------->AGL3                       <---------------AGL15  ----------------->AGL2                    <-----------GT1          <<<<<<<ZML2  <-----------------AGL1             --------->YAB1--------->YAB1 <---------HSFC1(1) ------DOF2                          <-----------GT1     <<<<<<<<<<WRKY11 ----GT1                          --------->YAB1<---------ICU4    <---------HSFB2a(2) ---GT1                       <----------DOF2 --------->ANAC55(2) --------->HSFC1(1) -----------GT1               <---------DAG2<---------AHL20(2)    --------->HSFB2a(2)             <-- -----DAG2                  <---------At4g35610--------->ICU4 <----------DOF2                     <--   ttttaccatttatgggattttggattttgcagctttttataacaatttacttattataggtcaactttctagaactcattttgtcaaccttgtgaattca  7560600  Previous    Next  AGI:  At5g22740.1    Description:  ATCSLA02 (Cellulose synthase-like A2); transferase, transferring glycosyl groups. similar to ATCSLA09 (RESISTANT TO AGROBACTERIUM TRANSFORMATION 4), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT5G03760.1); similar to ATCSLA03 (Cellulose synthase-like A3), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT1G23480.2); similar to ATCSLA03 (Cellulose synthase-like A3), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT1G23480.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16698.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15980.1); similar Range:  from: 7554931    to: 7560076    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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