Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              <------MYB83                                                            <------MYB46(1)                                                           --------->ALFIN1                                                           <---------MYB46(3)                                                          <--------P                                                          --------->ALFIN1             <---------ZAT2             ------>NtERF2    <---------MYB52(1)             <---------At4g35610       ------>NtERF2 --------->MYB52(1)            --------->At4g35610             --------->ZAT2            --------->LBD16  <---------MYB46(3)         <---------At4g35610             --------->At4g35610     <---------LBD16<---------ALFIN1             ---------->ID1          <---------At4g35610 ---------->DOF2 --------->LBD16                  <-----------RAV1(1)     --------->LBD16       --------->TOE2(3) <---------HSFB2a(2)       <---------ANAC58  ------>ZmHOX2a(1)        --------->TOE1(3) --------->HSFB2a(2)       <---------ANAC58   tctcctcccgatagcagctccagtgaatacctcaaagactccggcctctgggaaacaccggttggggacatgagcgtggttttgtcgctgcaaattcaga  7533600                                    <---------ANAC58                             --------->ZAT2                                                         <                             <---------At4g35610                                                    <                             <---------ZAT2                                                   -------                            ------>ZmHOX2a(1)                                                 <------                 --------->At4g35610<---------ANAC46                             ------->TEIL<-------                 <---------At4g35610<---------ANAC58                           <---------ZAT18<------       <---------YAB1     ----------->RAV1(2)                           <---------ARR11(3)   <-------   caaaatgttctgatttgtttgctgagactcctgctgtgtcttgagtctctcttcttctgtagcatttagctcgagttcttatgcacttcaaggcttcttt  7533700             --------->ATHB12            <------ZmHOX2a(2)           --------->ARR11(3)    <----------ARF1                               <---------At5g28300    --------->ZAT18                              <-----------GT1    <---------ZAT18                          --------->AHL20(2) -----------RAV1(1)                          <---------AHL20(1) ---------AtMYB61                            --------->AHL20(1)                              <------- -------->AGL15                          <---------AHL20(2)                           <-----------GT1 ----DOF2  <---------ARR11(3)           <---------ATHB12                           <---------AHL20(2) ----------AGL3                         --------->AHL20(2)        --------->ANAC46--------->AHL20(2) ---------AGL15            ---------->ID1<---------ICU4           <----------ID1<---------ARR11(3) ----------AGL2          <-----------RAV1(1)<---------AHL20(2)<---------AHL20(2)--------->ARR11(3)   ttttggtggacaagatcatttgaatttttgttgtattatctaataaatattttaccgaaactatttaaacgaaaaaactgaagatttatttctgttttat  7533800                                                                                         --------->ARR14(2)                                                                                         <---------ARR14(2)                                                                                        ------>MYB46(1)                                                                                        ------>MYB83                                                                                      ---------------                                                                                      <--------------                                                                                      <---------MYB59                                                                                     ----------------                                                                                     ----------------                                   --------->KAN4(2)                                 ================       --------->YAB1             <---------KAN4(1)                              <----------DOF2   --    --------->YAB1                --------->KAN4(1)  --------->AHL20(2)       --------->GLK1(2)   ---    <---------ICU4               <---------KAN4(2) <---------TOE2(3)         <---------GLK1(2)    <-- --------->YAB1         --------->YAB1     <---------GLK1(2) <---------AHL20(2) <---------ICU4    <-- --AHL20(2)<---------YAB1   --------->GLK1(2)    <---------AHL20(2)<-----------GT1 <-----------GT1<--   ttttcataatcatatgatttagagaatgagaatcgaataatctcagaatatttaagttaatatttcatttatcaatttagaatctttaccaaatatgcaa  7533900            --------->ANAC58            --------->ANAC58            --------->ANAC46           <---------TOE2(3)    <-----------GT1 >AGL15   <---------DOF5.7(2)             --------->ANAC58                  --------->HSFB2a(2) -AGL15   ---------->DOF2                 --------->ANAC58          --------->REM1(2) ->AG   --------->DOF5.7(2)    <---------TOE2(3)                    --------->ZAT14 ->AGL2--------->TOE2(3)     --------->MYB52(1)                  <---------ANAC46 =======================================MADS_MADS               <------NtERF2 ------->AHL20(2)            ---------->DOF2                   ------>NtERF2<---------HSFB2a(2) ------>AHL20(2)        --------------->AGL15                 --------->ANAC46 -------ATHB51          <---------------AGL15    --------->MYB52(1)--------->ALFIN1     ---------->DOF2 -------ATHB12   --------->ARR14(2)       <---------ANAC55(2) --------->DEAR3(1)     --------->TOE2(3) -------AHL20(2) <---------ARR14(2)       --------->ANAC55(2) <---------DEAR3(1)     --------->TOE1(3)   ataattttacattaacgcaaatattccaaaataaaggaagcgttacgaaattaagggcaaaacgacgccgtgtagactctcgaagaaccctaaagagact  7534000                                                                                        -------->P                                                                                       ------->GAMYB                                                                                      --------->MYB46(3)                                                                                      <---------MYB111(2)                                                                                      <------------MYB.PH3(2)                                   ------>MYB83                                     ------>MYB83                    *TSS           ------>MYB46(1)                                  --------->MYB52(1)                   <---------AHL20(2)             --------->ZAT14                   ------>MYB46(1)                  --------->AHL20(2)       <----------DOF2             <---------HSFB2a(2)               --------->YAB1     <---------ALFIN1<---------ZAT14      --------->HSFB2a(2)     --------->TOE2(3)      <---------ALFIN1<-----------HVH21 <----------DOF2     <---------MYB59   tcttaaacctcattcgattataaaatagccccaaacccactgcctctttcactgcaatttctctctttcgcttctaaaaaaaaacctaacaacctctctt  7534100                                                                                             --------                                                                                             <-------                                      --------->GLK1(2)             --------->ZAT14          --------                                     <---------GLK1(2)              <---------ZAT14         <--------                             --------->LBD16                     <---------ANAC58       ------->MYC3                           <---------LBD16                 --------->ARR11(3)           ------->MYC2                         <---------ARR14(2)                <---------ARR11(3)           <-------MYC3                         --------->ARR14(2)      <-----------GT1 <---------ANAC46       <-------MYC2               ----------->RAV1(1) ----------->ARR10 ------>ZmHOX2a(1)    ----------------------->TaNAC69(2)              --------->MYB46(3) <--------P    <---------AHL20(2)<---------ANAC58      --------->ANAC46      ------>ZmHOX2a(1) <---------GLK1(1)<----------DOF2  <---------CCA1(2)       <-----------GT1----   ctctcttcctcgttcaacaacaatggagttctggggtaagattctttatttattcctcttatatcttccgtctactgtttctattttccacgttccgaga  7534200                                             --------->ARR14(2)                        <---------TOE2(3)     ------>ZmHOX2a(2)                       <---------ARR14(2)          <---------ANAC58 <---------YAB1                <---------At4g35610    <---------CCA1(2)  <---------ANAC58 ->HSFB2a(2)           ------>ZmHOX2a(2)<---------ANAC55(1)             <---------At4g35610 --HSFB2a(2)          <------ZmHOX2a(2) <---------ANAC46          <----------DOF2      <---------TOE1(3) ->LBD16             <---------ARR11(3) <---------ANAC58        <---------ANAC58       --------->MYB59 -ANAC46 <---------MYB46(3)    --------->At4g35610 <-------TEIL <---------ANAC58 <---------TOE2(3) ----->GLK1(2)       --------->ARR11(3) <---------ANAC58     ---------->ID1      <---------TOE1(3)  -   attttgatcgattgttcatataagatcgtatttagctgtatttcgtgtatatgttcataccttgttgcctttgtagcttatttagggtttaggtttcaca  7534300                                                                                                    -                                                                                                    <                            <---------ANAC46                                                  <------     <------MYB83     <---------YAB1               <---------YAB1                 ----------->GT1<---     <------MYB46(1)<----------DOF2<---------ARR11(3)                    <----------DOF2    <------ZmHOX2a(1) -------->ARR11(3)--------->At4g35610    <-----------GT1      <---------YAB1     <---------TOE2(3)<--   tagagcttggtttcggtatcagctttgattatgtgtagatgttttacaagttgatgagtgactcatgtttgatttctttgtataatgttatttaggagtt  7534400          ---------->DOF2    <---------bZIP60(1)                                       ----------->GT1 ----------->HVH21                                           <---------TOE1(2) -------->At5g28300                                          <---------TOE2(2) -----------HVH21     <---------TOE2(3)                      <---------TOE1(3) ---GLK1(1)   --------->ANAC58                              <-----------RAV1(2)     ----------->GT1 ------LBD16  --------->ANAC46  ------>ZmHOX2a(1) <---------ZAT18        <---------ALFIN1           < -------ANAC46--------->ANAC58----------->RAV1(2) --------->ETT(2)     <-----------GT1            <--   gcggtgacaccaaaaaacgctactaaggtgactcctgaagaagacagccttgtccacatttctcaggttattttcacacttccaaactgtataaagtttt  7534500  Previous    Next  AGI:  At5g22640.1    Description:  EMB1211 (EMBRYO DEFECTIVE 1211). similar to unnamed protein product [Vitis vinifera] (GB:CAO16694.1); contains InterPro domain MORN motif (InterPro:IPR003409) Range:  from: 7529371    to: 7533787    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g22650.1    Description:  HD2B (HISTONE DEACETYLASE 2B). Identical to Histone deacetylase HDT2 (HDT2) [Arabidopsis Thaliana] (GB:Q56WH4;GB:O49209;GB:Q9FNJ6); similar to HD2A (HISTONE DEACETYLASE 2A), nucleic acid binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G44750.1); similar to hypothetical protein OsI_020519 [Oryza sativa (indica cultivar-group)] (GB:EAY99286.1) Range:  from: 7534020    to: 7536276    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version