Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       --------->AHL20(2)                     <---------AHL20(1)                     <---------ARR11(3)                 --------->YAB1 --------->AHL20(2)        --------->AHL20(2)                <---------YAB1  <---------AHL20(2)------>ZmHOX2a(1)     --------->YAB1  --------->AHL20(1)    --------->ARR14(2)                   <---------TOE2(3) --ATHB12    <---------YAB1<---------YAB1  <---------ARR14(2)            <---------TOE2(3) ----------   tctgcaaacatgagtattatcaaaatattagcattaaaatcaacatatactcctaagaaaaaaaatacttatattaagaattgtggtttcatttggaaaa  7496400                                                      <---------ATERF1(1)                                              <---------ANAC58          <------ZmHOX2a(1)                            --------->YAB1    <---------ANAC46       <------ZmHOX2a(1)              ---------->DOF2                 <---------ANAC58  --------->ALFIN1    --------->HSFB2a(2)         <---------------AGL15            <----------DOF2   ----------->RAV1(2)     <---------HSFB2a(2) ->GT1   --------------->AGL15           <---------DAG2 --------->ATERF1(1)    --------->GLK1(2)-----   acaaaaacaaactcaaaaaagaaaacaaactcataagtgtataccttttcttggaggggctcccctgtggaggaggagaagaatccctagaagataaatc  7496500                                                                                  <------ZmHOX2a(2) <                                                                                 --------->ARR11(3) <                                   <---------TOE2(3)                <------ZmHOX2a(2)       ---------                                   <---------YAB1                 ------->GAMYB  <---------ARR11(3) < ---->YAB1                  <---------At4g35610                  --------->MYB46(3)--------->YAB1  --   agaaaactgatcatcttcggtttctggtttagcagataagattgaaatggcattggaaaaactttcaacgatcgatttagcaagatcataacttgaaagc  7496600                            ------>NtERF2                            <---------ATERF1(1)                           --------->DEAR3(1)                           --------->RAP2.3(3)                           --------->RAP2.6(2)                                       <---------ANAC58                           --------->RAP2.3(2)                                       <---------ANAC58                          --------->ORA47(2)                                     <----------DOF2                          --------->RAP2.3(1)                                 ------>NtERF2                    <-------GAMYB                                            <---------ALFIN1                   <------MYB46(1)                                           --------->DEAR3(1)         <<<<<<<<<<<<<<<<<LFY                     <---------ZAT2             --------->DREB2C(2)         >>>>>>>>>>>>>>>>>LFY<------NtERF2        <---------At4g35610       --------->DEAR3(2)     <-----------HVH21    --------->ERF1          --------->ZAT2            --------->DEAR4(2)    --------->AtMYB61     --------->ATERF1(1)     --------->At4g35610       --------->ORA47(2)   --------->MYB46(3)    --------->At4g35610    <------NtERF2         <---------ANAC58 ---------WRKY38(1)<---------MYB46(3)         <---------ANAC46        <---------ANAC58 ---------ETT(2)   <------MYB83               <---------ANAC58        <---------ANAC46   --------->ALFIN1 ->DOF2 --------->ANAC46 <---------At4g35610  <---------ANAC58     --------->GLK1(1) <---------ANAC46 ---------WRKY12  <---------AtMYB61    ------->GAMYB         --------->MYB52(1) <---------DAG2   <--- ------->PCF5  <---------MYB46(3)     --------->MYB46(3) ----------------->AGL1 <----------DOF2------   ggtccaccatcagccattggatggttgagccgcctcttcaaccgcatggcgcagctatggccataacggatagcttgcaccgccttttcgtgtggggagt  7496700                        <---------ANAC58                        <---------ANAC46                        <---------ANAC58                 --------->ZAT14                 --------->ZAT18                        <----------DOF2                 <---------ZAT18           <---------ANAC58                 <---------ZAT14           <---------ANAC58 ----TEIL   --------->ZAT14                <---------ANAC46                                       <-- --->GLK1(1)<---------ZAT14        ------->TEIL  <XXXXXXXXXXXXXXXXXXXXXMIR2936         *TSS       ---   tcatttccatagagtatagtgaacttgtgtgtgtgtgtatgtgtttcttgtttgttttctttttctcaagtctcttctctgtgctataaacttttgaacg  7496800                                                                            --------->AHL20(2)                                                                            <---------YAB1                                                                            <---------AHL20(2)                                                                           <---------AHL20(1)                                                                          --------->YAB1              <---------AHL20(2)                                        ------>MYB83             <-----------TBP                            <---------------AGL15       <------ZmHOX2a(2)              ------->MYC2      --------------->AGL15       ====================HOX2a_HOX2a<-------MYC2     ----------------->AGL1      <---------ARR11(3)              ------->MYC3     <-----------------AG--------->AHL20(1)     <---------GLK1(1)                <-------MYC3     ----------------->AG--------->AHL20(2)     --------->GLK1(1)            <-------TEIL         ------------>CBF ------>MYB46(1)     --------- -------ARR14(2)          --------------->AtSPL3   <----------DOF2    <---------MYB59  --------->ZAT6 ------>ARR14(2)    <------ZmHOX2a(1)--------->ANAC46  <-----------------AGL2         <-------TEIL   gatagggagatcagaatttataggactagtcgtacatacacgttcccaaatgactttgccaatttgggtttaccaaatataatttacatacactaggtta  7496900                      --------->AHL20(1)                      --------->AHL20(2)                      <---------AHL20(1)    --------->ZAT18                 ---------->DOF2         <                      <---------AHL20(2)    --------->ZAT14            <---------------AGL15        <                 --------->AHL20(2)         <---------ZAT14           ----------------->AGL3        <                 <---------AHL20(2)       ------->MYC2              ------->TEIL                    -              --------->YAB1              <-------MYC3             <---------CCA1(2)                <             <---------ATHB12             ------->MYC3          --------->LBD16                     <       --------->ANAC58 <---------ICU4    ------->MYC4         <---------ANAC58                    -- <---------AHL20(2)  --------->YAB1       <-------MYC2         <---------ANAC46         ---------->DOF2 -->GT1--------->ANAC58<---------YAB1<------ZmHOX2a(1)         <---------ANAC58   <----------ID1   --   tattttaagaagccaatgataaattataatttcgatataggacatgtgctctgctagacttatatgcgtgaatctaaataaagagagacaaaaagataga  7497000                                                                                   --------->AHL20(2)                                                                            <------NtERF2  --------->ALFIN1                                                          <---------At4g35610 ------MYB83                   <---------ANAC46                           --------->ANAC46 ------MYB46(1)             --------->ICU4                                <---------DEAR3(1) ---------ANAC55(1)       --------->YAB1                               <---------ZAT14 --------->YAB1 -------->ANAC55(2)   ------>ZmHOX2a(2)                                --------->ZAT14 --------->AHL20(2) ---------ANAC55(2)   =======================HOX2a_HOX2a      <----------DOF2    --------->ANAC55(2) ---------ANAC46     --------->At4g35610                     <---------DAG2 --------->At4g35610------ ------->MYB111(1)  <---------ARR11(3)               <---------AHL20(2)--------->SPL7  <---------AHL20(2) ------->MYB59      --------->ARR11(3)<------ZmHOX2a(1)   <-----------GT1<---------LBD16   <---------   ttaggtgttgacattagcatatgatctgtcatgatgtataggaaacagagtttattttatatacctttcccagtacgcggctcacttaattatatacaat  7497100                                                                     --------->ICU4                                                                    <---------TOE2(3)                                                                   ---------->DOF2                                                               <--------ATHB1                                                               -------->HAHB4                                                               --------->ATHB51                                                               <--------HAHB4                                                               --------->YAB1                                                               <---------ICU4                                                              --------->ICU4                                                              <---------ATHB51                                                              --------->AHL20(2)                <----                                                --------->ANAC46  --------->AHL20(2)            -----    <---------YAB1                             <---------REM1(2) <---------YAB1 --------->AHL20(2)  -    <---------AHL20(2)                     <-----------ARR10  <---------YAB1    <---------AHL20(2)  < --->GLK1(2)         <-----------GT1<-----------GT1  <---------MYB52(1)  --------->AHL20(2)     ----- --GT1             <---------AHL20(2) --------->ZAT6<---------SPL7<---------AHL20(2)         <-------   ctgtttttaattgtttcagaatttatctgtttctcttattacactaatctacgcggttcgcttaataattaaagattaaaaattaaaaactactcctttc  7497200                                                             <---------ARR11(3)      ---------->DOF2                                        --------->ARR11(3) --------->ZAT6                                              --------->AHL20(2) -----HSFB2a(2)                                              --------->AHL20(1) ---->YAB1                                                   <---------AHL20(1)      --------->YAB1 -------->ZAT14            --------->GLK1(2)                --------->CCA1(2)       <---------YAB1 ---------ZAT14       <------ZmHOX2a(1)            ---------->DOF2         --------->CCA1(2) <------- ---->HSFB2a(2)    --------->CCA1(2)            <---------HSFB2a(2)       <---------ARR11(3) -------- ---DOF2 ----------->GT1 <------ZmHOX2a(1)      --------->HSFB2a(2)       --------->ARR11(3)---------   agaacactaaaaggtttcaagataggaggaatctaatagaaaactgtgttctacaaagtcagatatattagagagagatatgagctatgataaaccccaa  7497300  Previous    Next  AGI:  At5g22570.1    Description:  WRKY38 (WRKY DNA-binding protein 38); transcription factor. Identical to Probable WRKY transcription factor 38 (WRKY38) [Arabidopsis Thaliana] (GB:Q8GWF1;GB:Q9FK82); similar to WRKY62 (WRKY DNA-binding protein 62), transcription factor [Arabidopsis thaliana] (TAIR:AT5G01900.1); similar to WRKY transcription factor 6 [Solanum tuberosum] (GB:ABU49725.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) Range:  from: 7495542    to: 7496787    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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