Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        --------->ANAC46                      --------->ANAC58                      --------->ANAC58                     <---------LBD16                --------->AHL20(2)                   ----------->HVH21               --------->AHL20(2)                  <-----------HVH21          --------->ANAC46     <---------At4g35610                     --------->REM1(1) -------YAB1 <---------ANAC58               --------->ZAT14 ------>ICU4 <---------ANAC58        <---------At4g35610                       <---------HSFB2a(2) ---->YAB1 <-----------GT1           --------->At4g35610                       --------->HSFB2a(2) ----ZAT6----------------------->TaNAC69(2) <---------ZAT14            <-----------GT1    <---------ICU4   ataatggagcttattgcctctctcacggcttcactctgaagcttactacaccattaaaaaaaactcaaatttgtaacctttctataaacccaaaatgaca  7436300      <---------YAB1                                                                               <-    <---------ICU4                                                                                 --   <------ZmHOX2a(2)                                  <---------ATHB12                        -------   <---------YAB1                     ------>ZmHOX2a(1)      <---------ATHB12         <----------DOF2  --------->ARR11(3)     <----------DOF2          <---------ATHB12                    <---------DAG2  <---------ARR11(3) --------->MYB46(3)         --------->WOX13(1)        ---------->DOF2  <---------   acaagatcattactatgaaatcaacaacttttgttccctcctcatgaaaacaatcaatgaccaatagttttttgtataaagaatcaaactttttcacctc  7436400                                       --------->YAB1                                       <---------ICU4                                       <--------HAHB4               <-----------GT1  <---------At4g35610          --------->YAB1        --------->At4g35610   ------>ZmHOX2a(1)  <---------ATHB12 --------->ATHB12                                          ---- --------ARR14(2)   ------>MYB46(1)    -------->ATHB1                                           ----- ------->ARR14(2)   ------>MYB83----------->RAV1(2)        --------->DAG2               --------->MYB59 -->TOE2(3) <---------YAB1   <-------TEIL   --------->At4g35610 --------->ATHB12  <---------------AGL15 --GT1  -------->P<---------MYB59     <---------ATHB12    ---------->DOF2        --------->TOE2(3)---   aaatcctatctaccattataccaaatcaacattcatctgaatcattagcagaaaacaaaataaagttgatttgagtaaacaaacctcattttggtactcc  7436500                                                                                          ---------->DOF2                                --------->LBD16                                        --------->ANAC58                              <---------LBD16                   <---------ANAC55(2)    --------->ANAC58                             <-------TEIL                  --------->ANAC58   ------>ZmHOX2a(1)           <---------ANAC58 --------->GLK1(2)              --------->ANAC58  --------->TOE1(2)           <---------ANAC58 --------->CCA1(2)            <-----------GT1     --------->TOE2(2)      --------->ARR14(2)   <---------ARR14(2)         <---------REM1(1)   --------->ARR14(2) ----->LBD16              --------->GLK1(1)         --------->ZAT14       --------->GLK1(2)      ---- ------>RAV1(2)     --------->MYB52(1)        <-----------GT1   --------->ANAC55(2) <---------SPL7 ------>LBD16   ------>ZmHOX2a(1)<------ZmHOX2a(1)  <---------ZAT14       <---------ARR14(2)<--------   ctgaaacaaatttgcttcctgtaaacggagattcaggaaaatgagatttaacagtgttgtaacgaaacgtattgagaatcctccgatggacggaaagaca  7436600                                                                     <---------ATHB12                                                                --------->ANAC58                                                                --------->ANAC46                        ----------->RAV1(2)                <------NtERF2                      <-----------GT1                     <-----------HVH21              *TSS                      <<<<<<<<<GT-1                       ------>NtERF2    <-------GAMYB --------->MYB46(3)                    <---------WOX13(1)                   --------->bZIP60(1)   <---------ANAC55(2)                  --------->ATHB12   --------->ETT(1)    --------->bZIP60(2)   <---------ANAC46                <---------WOX13(1)<------MYB46(1)        <---------bZIP60(1)<---------MYB52(1) ------>DOF2  --------->ATHB12    <------MYB83  ---------->DOF2 --------->ANAC58        ------->TEIL --ID1       <---------YAB1      <---------AtMYB61  --------->MYB52(1)    <---------MYB46(3)    <----   aaagtattgaagaagatgattgatttacctgtgggaaggtcggaaacagagaaagaacggcgtcacaagcaatcgtctgttacttatatgaaccactagt  7436700                                                                                --------->ICU4                                                                       <---------YAB1                          <---------YAB1                              --------->AHL20(1)                    <-----------GT1                                 <---------AHL20(2)                 <---------AHL20(2)                                 --------->AHL20(2)                 --------->AHL20(2)               <---------ALFIN1  --------->AHL20(1)                 --------->ATHB51                 ----------->RAV1(1) --------->AHL20(2)                 <---------ICU4                --------->PCF2    --------->AHL20(2)<---------YAB1                --------->ICU4               --------->MYB59----------->GT1     <XXXXXXXXXXXXXXXXXXXXMIR391 -----ZAT6   --------->ICU4    ---------->DOF2<-----------TCP11(1)  <---------AHL20(1)            ---   gacaaaactctagccctaattatttcttctcattaaagcccagtatttaggcccacatagaaacgtataaaatattataggccttattatttctgcgaat  7436800                                                                                                  ---                                                         --------->ANAC58                         <--                                                         --------->ANAC58                        ----                                                      <---------ATHB12                           ----                                                    ------>MYB46(1)                             -----                                                    ------>MYB83                                -----                                                  <---------------AGL15                      --------                                                  --------------->AGL15                      --------                              --------->ANAC46   ----------------->AGL1                      --------                            --------->ZAT6       ----------------->AG                      <---------                   ----------->GT1               ----------------->AGL2             <----------DOF2 ------->DOF2   ---------->DOF2                <-----------GT1           <---------------AtSPL8------   taaagcctaatttcttcagaaaggttttaaacactaaacaaaacttgtttaaccaaatcaagaaatgttaagtagattgtactaagcttttttatacgca  7436900       <------MYB46(1)  --------->ANAC58  --------->ANAC58 ------>AtMYB61 -------ALFIN1                                                        <---------YAB1 ----->ANAC58                                                       --------->YAB1 ----->ANAC58          <---------GLK1(2)                       --------->AHL20(2) -->TEIL               <---------ARR14(2)                     <---------AHL20(2) ------>RAV1(1)        --------->ARR14(2)                 <---------AHL20(2) ->ANAC58              --------->ARR11(3)                <---------AHL20(1) ->ANAC46        ---------->DOF2                         --------->AHL20(1) ->ANAC58--------->CCA1(2)         ----------->GT1      <---------AHL20(2) --GT1 <------MYB83    <---------ARR11(3) <-------TEIL--------->AHL20(2) --->ANAC46<---------YAB1         >>>>>>>>>TBF1       <---------AHL20(2)                   <---------HSFB2a(2)   ccacagggaaggtatgaatgaaagagatactctgaagaagaaaatacatatgttatatatatattttaaatcatagttgaaacaatactcagcctagaag  7437000                                                                                    <---------ANAC58                                                                                    <---------ANAC58                                                                                   <---------MYB46(3)                                                                                  --------->ALFIN1                <-----------GT1        --------->ANAC46                         --------->ALFIN1            ------>ZmHOX2a(1)    --------->AHL20(2)                           <---------ANAC58      <---------ICU4           <---------------AGL15                         <---------MYB46(3)      -------->ATHB1           --------------->AGL15                    <---------ANAC58      --------->YAB1           <----------DOF2                          <---------ANAC58     <---------ATHB12   <---------ARR11(3)                    --------->YAB1<---------ANAC46   --------->WOX13(1)   --------->ARR11(3)                  <---------ARR11(3)<---------ANAC58   <<<<   gcagacaatcattcctattcactacaaatctttctttatatacaaaactagttagaaaacaaaatcataagaatacttgtgggtgtgggtgtttgtgtca  7437100                                                                                --------->TOE2(3)                                                                             <---------ARR14(2)                                                                             --------->ARR14(2)                                                                  <------ZmHOX2a(2)      <---------ARR11(3)                                                                  =================HOX2a_HOX2a                                            =============================HOX2a_HOX2a     --------->ARR14(2)                                <---------ANAC46     --------->YAB1         <------ZmHOX2a(1)--------                     <-----------HVH21      ------>ZmHOX2a(1)    <---------ARR11(3)      --------->ARR11(3) <<<<<<<<WRKY18     ------>ZmHOX2a(1)   <-----------GT1          --------->ARR11(3)  <---------ICU4   agagtcaagaccaatttcgctcctgtcaaatgtggtttgttttctccttatccaaacataaacgagagatcatccataggaacctcatcaagacctgctg  7437200  Previous    Next  AGI:  At5g22440.1    Description:  60S ribosomal protein L10A (RPL10aC). Identical to 60S ribosomal protein L10a-3 (RPL10AC) [Arabidopsis Thaliana] (GB:P59231;GB:P53029;GB:Q9FMQ7); similar to 60S ribosomal protein L10A (RPL10aA) [Arabidopsis thaliana] (TAIR:AT1G08360.1); similar to putative 60S ribosomal protein L10A (RPL10aC) [Oryza sativa (japonica cultivar-group)] (GB:BAD09090.1); contains InterPro domain Ribosomal protein L1, 2-layer alpha/beta-sandwich; (InterPro:IPR016094); contains InterPro domain Ribosomal protein L1; (InterPro:IPR002143) Range:  from: 7435079    to: 7436689    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g22450.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G19390.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48752.1) Range:  from: 7437148    to: 7443350    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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