Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   ----NtERF2                                                                --------->ATHB12 ----->At4g35610     --------->SPL7                                  --------->YAB1 ------At4g35610   --------->At5g28300                      <---------ARR14(2) -->NtERF2       --------->ANAC58                           --------->ARR14(2)                    <-- -----DEAR3(1)   --------->ANAC46   ------->GAMYB           --------->ARR11(3)                   ---- --->ZAT18       --------->ANAC58----------->RAV1(1)        <---------ARR11(3)                   <--- >GAMYB--------->At4g35610 --------->ANAC58                 --------->GLK1(2)               --------- >HVH21<---------At4g35610 --------->ANAC58     ------->GAMYB       --------------------->WRI1  <---- ---AGL1        <---------LBD16 --------->REM1(1)          <---------GLK1(2)      ----------->HVH21   gctgaattcagctaataccacggtacctctcgctacaacagcatagacaatcgccatcggagaatcttcaattagagtgattcgatgacagagagtggag  7405700              <---------ANAC46             --------->ATERF1(1)            <---------DEAR4(2)            <---------ATERF1(1)            <---------RAP2.3(1)            ------>NtERF2            <---------ERF1           --------->DEAR3(1)           --------->ATERF1(2)           <---------ATERF1(2)           <---------RAP2.3(2)           <---------RAP2.3(3)           <---------DEAR3(1)          --------->ATERF1(1)          <---------ABI4(1)                                                      <------MYB83         <---------RAP2.3(1)                                                     <---------ANAC58         --------->LBD16                                                         <------MYB46(1)         <---------ATERF1(1)                                                     <---------ANAC58         ------>NtERF2                                                           --------->At4g35610       <---------LBD16                                                           <---------ANAC46      <---------ATERF1(1)                                                       <---------AtMYB61 <---------ANAC55(2)                                                            --------->MYB111(1) --------->ANAC55(2)                 --------->At4g35610                        --------->MYB111(2) --------->ANAC58                    <---------At4g35610                        --------->MYB46(2) --------->ANAC58               <------NtERF2             --------->YAB1        --------->MYB59 ----ZmHOX2a(2)                <---------DEAR3(2)    ----------->GT1            --------->MYB52(2) ----->ARR11(3)         <---------WRKY12     --------->YAB1<---------AHL20(2) <---------MYB52(1) ------ARR11(3)   ---------->DOF2 <----------DOF2--------->ZAT14           <---------TOE2(3) >ALFIN1<---------DEAR3(1)     ------>NtERF2<------ZmHOX2a(2)       *TSS   <---------TOE1(3) -----GLK1(1)<------NtERF2    <---------DEAR3(1) <---------ZAT14    ----------->GT1 <-------TEIL   atcacgcgctccggcggcgagaaagttcaacgtcggctttgctgcgatcagaacagagtataaaaatgcgaagttataaggttaggtgcaaacgtttcga  7405800                             <------------CBF                           <---------YAB1      <---------AHL20(2)                           <---------AHL20(2)<---------YAB1                     <---------ANAC55(1)     <---------AHL20(2)                     <---------ANAC58     --------->AHL20(1)                                    <----                     --------->ANAC55(2)  <---------AHL20(1)                                   ------                     <---------ANAC58     --------->AHL20(2)                       <---------TOE1(3)                     <---------ANAC55(2)  <---------AHL20(2)                       <---------TOE2(3)                     <---------ANAC46--------->TOE2(3)                            <---------At5g28300              <------------CBF      --------->At4g35610                        <----------DOF2 ------            <---------AHL20(2)  <-----------HVH21     <-----------GT1     ------->TEIL         <----- <-----------GT1   <-----------GT1  <---------ANAC55(2)           ----------->RAV1(2)          <-----   atataaccccttgttttattgttacgtttttaattgtcacctaaaatattattttgttacattttaaaccctgatgcatcggtttacggtttaccaattt  7405900                                   --------->LBD16                                  --------->ANAC46                               ------>MYB46(1)                             <-----------GT1                               -------->P<-----------GT1                   --------->ARR11(3)                               ------>MYB83 <----------DOF2   <---------GLK1(2)                             --------->DEAR3(1)               <---------ARR14(2) -----AHL20(2)              --------->DEAR3(2)                --------->ARR14(2)   ------>ZmHOX2a(2) --->AHL20(2)               --------->MYB46(3)         <---------ANAC58 --------->YAB1 --->AHL20(1)             --------->MYB52(1)<---------DAG2<-------TEIL  <---------ICU4           ---- ----AHL20(2)      --------->LBD16--------->ANAC58     <---------ANAC58<---------ATHB12          <--- ----AHL20(1)     --------->ANAC46--------->ANAC58 <---------MYB52(1)  <---------ATHB51      <-------   attaggccttggtaacttatccgaaaacaaaccgacccgaaattcacttttcggtttgggttcggatactccaataataacttgatcgtttccttctttt  7406000                 <------MYB83              --------->ARR14(2)              <---------ARR14(2)               --------->AHL20(2)              <---------MYB52(1)               <---------AHL20(2)                           ---------          <---------LBD16                     --------->AHL20(2)                            ---------   <---------YAB1<---------DEAR3(2)           --------->YAB1     --------->AHL20(2)         <-------- ----->AHL20(2)  <------MYB46(1)      <-----------GT1---------->DOF2         <------ZmHOX2a(2)      *TSS ------AHL20(2) --------->MYB59 --------->ANAC58    --------->AHL20(2) <-----------GT1      <-------- ---DOF2<-----------GT1         --------->ANAC58<---------YAB1   <---------AHL20(2)   <---------DEAR3(1)   taatttcgattatccggttcggttcgagtatagcacgaataaaccgaattaaaattaaagccctaatttaaatataccgatcgagtcttcggcgagctta  7406100                                   <---------ANAC46                                  <------NtERF2                                <---------DEAR3(1)                               <---------ZAT2                               <---------At4g35610                               --------->ZAT2                                                 <------                              <---------ATERF1(1)       --------->MYB52(1)         --------->LBD16 >ZAT2                        --------->LBD16       --------->LBD16              <---------LBD16  <-- >At4g35610                   ------>NtERF2         ------>NtERF2       <---------ANAC58   --------->ZAT14 -ZAT2                      <---------LBD16        <---------ETT(1)     <---------ANAC58   <---------ZAT14 -At4g35610               <---------ARR14(2)      <---------LBD16<-----------HVH21 ------>NtERF2  <--   cttcgccttgaatcgagtcttcgacgagtctccggctgcgagtttctcttgctccggcaaacagacctgtcattgcttctctctccggctaactacacag  7406200            --------->AHL20(2)            <---------AHL20(2)                  --------->ICU4           --------->AHL20(2)                   <---------YAB1  <---------GLK1(2)                          <---------AHL20(2) <---------At4g35610                  <---------At4g35610 <---------ZAT2                     <---------ANAC46 -----RAV1(2)                       <---------ANAC58 -------ANAC58                      <---------ANAC58 --------->KAN4(2)                <----------DOF2 -------ANAC58                  <---------At4g35610------->TEIL                <---------At4g35610   gcgagcttctctatttattttcttctgtgtctccagttgcttctgatataatgaatatgctcttgaagcaaattgtttctctgcttctctttctccagtg  7406300                                          --------->AHL20(1)              <---------YAB1              <---------AHL20(2)            --------->YAB1                <---------YAB1           <---------YAB1                --------->AHL20(2)      ---------->ID1                     --------->YAB1                                         -----     <-------GAMYB                ----------->GT1       <---------YAB1              ----------->HVH21    --------->MYB52(2)      <------ZmHOX2a(1)       <---------ARR14(2)          --------->MYB46(3) <-    <---------MYB46(3)    <---------TOE2(3)        <------ZmHOX2a(1)  <-----------HVH21  <---------GLK1(1)   aattgtttgttgtattataaacgaggtttaggaattgggttaataatattggaggattgtgtttgtattctgtgtccgacgaacaaatgacatttccgat  7406400                                                                          --------->ATHB12                                                                          <---------ICU4           <-                                                                         <---------YAB1          ----               <---------ZAT14                                           --------->ICU4   <----------DOF2             --------->ZAT2                                     <---------MYB52(1)       <---------ANAC58 ---->GLK1(1)--------->At4g35610                              <---------YAB1       --------->ARR11(3) --------YAB1<---------ZAT2                           <-------TEIL--------->MYB52(2)     <---------ANAC58   ttctattgtgctacgagctcagtgtttagaagggttttgatgttctctattgaatattcatgttatgttagtttgatgattagatgattttgctttgcaa  7406500                                                             --------->WOX13(1)                                                       <------MYB46(1)                                       ------->MYC3    <------MYB83  <<<<<<<<<TBF1 --------At5g28300            <---------YAB1           ----------->GT1 ----->ICU4    ----------->HVH21       <-------MYC3 <---------MYB52(1)                     <---------MYB46(3)   ttactgtgtttttttgtctgactggctctgatattatacaacgtgtttgactccgattggtatcaatcttcttcttcgtcttcagaagcatggtgtttgg  7406600  Previous    Next  AGI:  At5g22360.1    Description:  ATVAMP714 (Vesicle-associated membrane protein 714). Identical to Vesicle-associated membrane protein 714 (VAMP714) [Arabidopsis Thaliana] (GB:Q9FMR5;GB:Q93Z99); similar to ATVAMP713 (Arabidopsis thaliana vesicle-associated membrane protein 713) [Arabidopsis thaliana] (TAIR:AT5G11150.1); similar to synaptobrevin-like protein [Brassica juncea] (GB:ABM30199.2); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterPro domain Synaptobrevin; (InterPro:IPR001388); contains InterPro domain Longin; (InterPro:IPR010908) Range:  from: 7404007    to: 7405768    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g22370.1    Description:  EMB1705/QQT1 (QUATRE-QUART1); ATP binding. similar to ATP-binding family protein [Arabidopsis thaliana] (TAIR:AT4G12790.3); similar to ATP-binding family protein [Arabidopsis thaliana] (TAIR:AT4G12790.4); similar to ATP-binding family protein [Arabidopsis thaliana] (TAIR:AT4G12790.2); similar to Os02g0555000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047120.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72850.1); contains InterPro domain Protein of unknown function, ATP binding; (InterPro:IPR004130) Range:  from: 7406100    to: 7408705    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version