Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       --------->HSFC1(2)       <---------ALFIN1                     --------->HSFB2a(1)     ------>MYB46(1)                     <---------HSFC1(2)      ------>MYB83                     <---------HSFB2a(1)--------->YAB1          --------->ANAC46             <---------ATHB12          --------->ANAC58             --------->MYB46(3)       --------->ARR14(2)            --------->WOX13(1)                                <---------ARR11(3)       <---------ARR14(2)        --------->GLK1(2)                         --------->YAB1   ----------------->AGL1   --------->LBD16 ----------->RAV1(1)         --------->WOX13(1) -->TEIL  --------->ANAC58 --------->LBD16 --------->AtMYB61         --------->GLK1(2) --------->ARR11(3)   tctcttccaaatacgaaaatggaaccctccctgaaaatccaatcaccaacacatcaaaacataaaactcagaatcaattacaaagactaaatcttcttaa  7405400                                                                                       --------->GLK1(2)                                                                                    <---------TOE2(3)                                                                                 ------>ZmHOX2a(2)                                                                                --------->CCA1(2)                                                                               <---------AGP1                                                                               --------->ARR14(2)                                                                               <---------ARR14(2)                                                                 ----------->GT1<------ZmHOX2a(2)                  ----------->GT1                      --------->AtLEC2        --------->AGP1                 --------->DAG2                      <---------------AGL15     <---------ARR11(3)   <                ---------->DOF2                     ----------------->AGL1<-----------HVH21     <----        <---------ARR14(2)  <---------ICU4    --------->ATHB12  --------->DAG2 --------->ARR11(3)----      <---------YAB1----------->GT1          <---------YAB1   ---------->DOF2 <---------CCA1(2) -----   gagagattacgattcggagaaagtgaaaaatacttacttccaaaggtatcattggccatacagagaaaggtaagaccatcagatctaagaatatggaaga  7405500                                                                                           --------->MYB52(1)                                                                                           <---------ARR14(2)                                                                                         <-----------HVH21                                                                                        --------->ANAC55(2)                                                                            <---------RAP2.3(1)                                                                            ------>NtERF2--------->LBD16                                                                           --------->DEAR3(1)     <--                                                                          --------->RAP2.3(1)    <---                                                               <-----------HVH21        <---------ANAC55(2)                                                           <---------ARR14(2)<------NtERF2 --------->ARR14(2)                                                           --------->GLK1(2)<---------ATERF1(1)  ----      ------>ZmHOX2a(2)                          <---------GLK1(2)       <---------ATERF1(1)   ------     <------ZmHOX2a(2)                          --------->HSFC1(2)      --------->ANAC46--------->ANAC46    --------->ARR11(3)                       ---------->DOF2 ------>ZmHOX2a(2) xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)    <---------ARR11(3)                     ----------->HVH21<------ZmHOX2a(2)--------->ATERF1(1) ----   ------->GAMYB                         --------->LBD16   --------->ARR14(2)----------->RAV1(2)<---- -----------GT1                        <---------LBD16    <------ZmHOX2a(1)<---------DEAR3(1) ------- -----ARR11(3)                      --------->GLK1(1)--------->HSFB2a(2)<---------DEAR3(1)----------- ----->CCA1(2)               <---------At4g35610<---------HSFC1(2)    <---------ALFIN1 <---------LBD16 ---->ARR11(3)    ---------->DOF2   <---------GLK1(1)<---------HSFB2a(2)--------->O2  <--------------   tataacgatcttgagagaaacaaagtctttcatcggagatttccggtgaaagcttctcgaggatccgtcgcaccacggcgcctgtgtttcccgtaacggc  7405600 ----NtERF2                                                                --------->ATHB12 ------At4g35610     --------->SPL7                                  --------->YAB1 ----->At4g35610   --------->At5g28300                      --------->ARR11(3) --->ZAT18       --------->ANAC46                           --------->GLK1(2)                     <-- -->NtERF2       --------->ANAC58   ------->GAMYB           <---------ARR11(3)                   ---- -----DEAR3(1)   --------->ANAC58----------->RAV1(1)        <---------ARR14(2)                   <--- >GAMYB--------->At4g35610 --------->ANAC58                 --------->ARR14(2)              --------- >HVH21<---------At4g35610 --------->ANAC58     ------->GAMYB       --------------------->WRI1  <---- ---AGL1        <---------LBD16 --------->REM1(1)          <---------GLK1(2)      ----------->HVH21   gctgaattcagctaataccacggtacctctcgctacaacagcatagacaatcgccatcggagaatcttcaattagagtgattcgatgacagagagtggag  7405700              <---------ANAC46             <------NtERF2            ------>NtERF2            <---------ATERF1(1)            <---------ERF1            <---------DEAR4(2)            <---------RAP2.3(1)           <---------ATERF1(2)           <---------DEAR3(1)           --------->ATERF1(2)           --------->DEAR3(1)           <---------RAP2.3(3)           <---------RAP2.3(2)          <---------ABI4(1)          --------->ATERF1(1)                                                    <---------ANAC58         ------>NtERF2                                                           <------MYB83         --------->LBD16                                                         --------->At4g35610         <---------RAP2.3(1)                                                     <------MYB46(1)         <---------ATERF1(1)                                                     <---------ANAC46       <---------LBD16                                                           <---------ANAC58      <---------ATERF1(1)                                                       --------->MYB46(2) <---------ANAC55(2)                                                            <---------AtMYB61 --------->ANAC58                    <---------At4g35610                        --------->MYB111(1) --------->ANAC55(2)                 --------->At4g35610                        --------->MYB59 --------->ANAC58              ------>NtERF2              --------->YAB1        --------->MYB52(2) ----ZmHOX2a(2)                <---------DEAR3(2)    ----------->GT1            --------->MYB111(2) ----->ARR11(3)         <---------WRKY12    <------ZmHOX2a(2)              <---------TOE1(3) ------ARR11(3)   ---------->DOF2 <----------DOF2<---------ZAT14    *TSS   <---------TOE2(3) >ALFIN1<---------DEAR3(1)    <---------DEAR3(1) --------->ZAT14    ----------->GT1 <-------TEIL -----GLK1(1)--------->ATERF1(1)<------NtERF2--------->YAB1<---------AHL20(2) <---------MYB52(1)   atcacgcgctccggcggcgagaaagttcaacgtcggctttgctgcgatcagaacagagtataaaaatgcgaagttataaggttaggtgcaaacgtttcga  7405800                             <------------CBF                           <---------AHL20(2)  <---------AHL20(2)                           <---------YAB1    <---------AHL20(2)                     <---------ANAC46        <---------YAB1                     <---------ANAC58     <---------AHL20(2)                                    <----                     <---------ANAC55(2)  <---------AHL20(1)                                   <-----                     <---------ANAC58--------->TOE2(3)                             <---------TOE2(3)                     <---------ANAC55(1)  --------->AHL20(2)                       <---------TOE1(3)                     --------->ANAC55(2)  --------->AHL20(1)                      <---------At5g28300              <------------CBF      --------->At4g35610                        <----------DOF2 ------            <---------AHL20(2)  <-----------HVH21     <-----------GT1     ------->TEIL         <----- <-----------GT1   <-----------GT1  <---------ANAC55(2)           ----------->RAV1(2)          ------   atataaccccttgttttattgttacgtttttaattgtcacctaaaatattattttgttacattttaaaccctgatgcatcggtttacggtttaccaattt  7405900                                   --------->LBD16                                  --------->ANAC58                               -------->P<-----------GT1                   <-----------GT1                               ------>MYB46(1)                             --------->ARR11(3)                               ------>MYB83 <---------DAG2    <---------GLK1(2)                             --------->DEAR3(1)               --------->ARR14(2) -----AHL20(2)              --------->MYB46(3)            <-------TEIL  --------->YAB1 ----AHL20(1)               --------->DEAR3(2)         <---------ANAC58 <---------ICU4           ---- --->AHL20(2)             --------->MYB52(1)<----------DOF2   <---------ARR14(2)   ------>ZmHOX2a(2) ----AHL20(2)      --------->LBD16--------->ANAC46     <---------ANAC58<---------ATHB12          <--- --->AHL20(1)     --------->ANAC46--------->ANAC58 <---------MYB52(1)  <---------ATHB51      <-------   attaggccttggtaacttatccgaaaacaaaccgacccgaaattcacttttcggtttgggttcggatactccaataataacttgatcgtttccttctttt  7406000                 <---------DEAR3(2)              <---------MYB52(1)              <---------ARR14(2)               --------->AHL20(2)              --------->ARR14(2)               <---------AHL20(2)                           ---------          <---------LBD16                     --------->AHL20(2)                            ---------   <---------YAB1<------MYB46(1)              --------->YAB1     <---------AHL20(2)         <-------- ----->AHL20(2)  <------MYB83         <-----------GT1---------->DOF2         <------ZmHOX2a(2)      *TSS ------AHL20(2) --------->MYB59 --------->ANAC58    --------->AHL20(2) <-----------GT1      <-------- ---DOF2<-----------GT1         --------->ANAC58<---------YAB1   --------->AHL20(2)   <---------DEAR3(1)   taatttcgattatccggttcggttcgagtatagcacgaataaaccgaattaaaattaaagccctaatttaaatataccgatcgagtcttcggcgagctta  7406100                                   <---------ANAC46                                  <------NtERF2                                <---------DEAR3(1)                               <---------ZAT2                               --------->ZAT2                               <---------At4g35610                                            <------                              ------>NtERF2             --------->MYB52(1)         --------->LBD16 >At4g35610                   <---------ATERF1(1)   ------>NtERF2                <---------LBD16  <-- >ZAT2                        --------->LBD16       --------->LBD16     <---------ANAC58   <---------ZAT14 -At4g35610                 <---------LBD16        <---------ETT(1)     <---------ANAC58   --------->ZAT14 -ZAT2                    <---------ARR14(2)      <---------LBD16<-----------HVH21 ------>NtERF2  <--   cttcgccttgaatcgagtcttcgacgagtctccggctgcgagtttctcttgctccggcaaacagacctgtcattgcttctctctccggctaactacacag  7406200            --------->AHL20(2)            <---------AHL20(2)                  <---------YAB1           --------->AHL20(2)                   --------->ICU4  <---------GLK1(2)                          <---------AHL20(2) <---------ZAT2                       <---------At4g35610 <---------At4g35610                <---------ANAC58 -----RAV1(2)                       <---------ANAC46 -------ANAC58                      <---------ANAC58 --------->KAN4(2)                <----------DOF2 -------ANAC58                  <---------At4g35610------->TEIL                <---------At4g35610   gcgagcttctctatttattttcttctgtgtctccagttgcttctgatataatgaatatgctcttgaagcaaattgtttctctgcttctctttctccagtg  7406300  Previous    Next  AGI:  At5g22360.1    Description:  ATVAMP714 (Vesicle-associated membrane protein 714). Identical to Vesicle-associated membrane protein 714 (VAMP714) [Arabidopsis Thaliana] (GB:Q9FMR5;GB:Q93Z99); similar to ATVAMP713 (Arabidopsis thaliana vesicle-associated membrane protein 713) [Arabidopsis thaliana] (TAIR:AT5G11150.1); similar to synaptobrevin-like protein [Brassica juncea] (GB:ABM30199.2); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterPro domain Synaptobrevin; (InterPro:IPR001388); contains InterPro domain Longin; (InterPro:IPR010908) Range:  from: 7404007    to: 7405768    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g22370.1    Description:  EMB1705/QQT1 (QUATRE-QUART1); ATP binding. similar to ATP-binding family protein [Arabidopsis thaliana] (TAIR:AT4G12790.3); similar to ATP-binding family protein [Arabidopsis thaliana] (TAIR:AT4G12790.4); similar to ATP-binding family protein [Arabidopsis thaliana] (TAIR:AT4G12790.2); similar to Os02g0555000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047120.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72850.1); contains InterPro domain Protein of unknown function, ATP binding; (InterPro:IPR004130) Range:  from: 7406100    to: 7408705    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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