Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       --------->ANAC58                                     --------->ANAC58--------->ANAC58                                   ---------->DOF2   --------->ANAC58                                 ------->GAMYB       --------->ANAC46                          ------                               --------->At4g35610--------->ZAT14                 <-----------GT1        <---------TOE1(3)  --------->ANAC46       <---------ZAT18               <---------ATHB12 ---- ----DOF2  <----------DOF2 --------->HSFB2a(2)    --------->ZAT18             --------->WOX13(1)<----   aattccatttaagctttgcaatttgttttccacaactgaaagccatttcaagttcacacaagacttgagtccctaaaaaccaattaacacatcaacatat  7390100                                                                                  <------ZmHOX2a(2)                                                                                 <---------ARR11(3)                                                                                 --------->ARR14(2)                                                                                 --------->ARR11(3)                                                                                 <---------ARR14(2)                                                                                 --------->GLK1(2)                                                                                 <---------AGP1                                                                                 <---------ARR14(3)                                                                           --------->TOE1(3)                                                                          ----------->RAV1(2)       --------->ANAC58                                                  -------->P------>ZmHOX2a(2)       --------->ANAC58                                                  ------->TEIL   --------->ARR11(3)                                            ------->TEIL  ----------->ARR10 --->AHL20(2)                                     <---------AHL20(2)  <---------ATHB12      <-------- ----->YAB1                                      --------->AHL20(2) --------->WOX13(1)<---------MYB52(1) -----AHL20(2)       --------->YAB1       <---------YAB1      --------->ANAC55(2)--------->ARR14(3)   aataagctctagcaacttaaaaatcaaaactttggatgctatttatgcttataaaatgagatttatgtatcaatcaacctgaagatctgttagattgttg  7390200                                                                            <---------ANAC58                                                                            --------->ANAC55(2)                                                                            <---------ANAC55(2)                                               --------->TOE2(3)            <---------ANAC58                                              --------->ANAC58              <---------ANAC46      <------ZmHOX2a(2)                       --------->ANAC58        <---------TOE1(3)     --------->ARR11(3)                  --------->ANAC58             <---------TOE2(3)     <---------ARR11(3)                  --------->ANAC46   --------->AHL20(2) -MYB46(3)  <----------DOF2              --------->ANAC58   <---------AHL20(2)   aaacgaagatcaagcttttccaagtttttgaacttgctcaaacaagacacctaaatatacaattaaacaattagggtttcgtatcaatttctacttggga  7390300                               <-----------HVH21                           <-----------HVH21                              <---------DEAR3(2)                     <---------ARR14(2)                              <---------MYB46(3)                     --------->ARR14(2)                             <---------DREB2C(2)                     --------->GLK1(2)                             <---------At1g77200                    <---------GLK1(2)                             <---------DEAR3(1)                  --------->ANAC55(2)                          ========================bZIP_DOF       --------->ANAC46                          --------->O2 <----------DOF2         --------->MYB52(1)                          <---------TGA1a                      <---------WRKY18(1)                          --------->TGA1a                     ----------->HVH21            ----------->GT1<-----------HVH21                <---------ANAC58      <---------HSFB2a(2) --------->ANAC46      <------NtERF2 --------->WRKY12      --------->HSFB2a(2) <---------O2 <---------DAG2       <---------ANAC58 --------->ATHB12<-------   acagagtttcagaacagaaacaatactcacgtcggtgagagctttatggccgagattaagttccttgacggaatctgggtcattggtcttcttctctttc  7390400                              ------>NtERF2                 --------->TOE2(3)                <---------TOE2(3)                     --------->ANAC46               <---------DOF5.7(2)                  --------->ANAC58               --------->MYB52(1)                ---------->ARF1                           <---------             --------->DOF5.7(2)             <---------ANAC58                  --------->TOE2(3)       <---------WRKY38(1)   --------->DEAR3(1) <-----------HVH21              <---------DAG2       <---------WRKY12   --------->DEAR3(1) <---------ANAC58      <----------DOF2      *TSS ---DOF2    --------->At5g28300      ---------->ID1 --------->ANAC58        <-----------GT1<---------GLK1(2)   aatacttgttcaacggttaacgaattcatcgccgtcttcgtcttcttccttgtcacacaaaaccctagtcttttggtttcaccttattcaaaagattgtc  7390500                                                                                   <------ZmHOX2a(2)                                                                                   ==================                                                                                  --------->ARR14(2)                                                                                  <---------ARR14(2)                                                                              <---------LBD16                                                                             <<<<<<<<<SPL5                                                                          <---------------AtSPL8                                                                          <---------------AtSPL3                                                                         <------------CBF                                                                        --------->ATHB51                                                                       <---------YAB1         ------->GAMYB                                                 --------->ICU4         -------       ------>MYB83                <---------ALFIN1          <-----------GT1 <<<<<<<<<SPL1    <------       -------->P   <----------DOF2----------->RAV1(1)      ----------->HVH21<<<<<<<<<SPL4   <-------      --------->MYB52(1)        --------->ANAC46            --------->WRKY12<---------SPL7<---------ALFIN1 ---CBF------>MYB46(1)       ---------->DOF2  <------------CBF      <---------YAB1<-----------HVH21   tctgttcccaaccgtgataagtctttacccaaaaaccccacagttttctattgtttatacatttgaccttgttattattgtacggatcagggacaccctc  7390600                                                            <---------YAB1            <---------ALFIN1                            --------->ZAT14                          ----         ------>ZmHOX2a(1)                     --------->ZAT2  <---------YAB1                 -------         ===================HOX2a_HOX2a        ----------->RAV1(2)                         --------->ANAC46 ===============HOX2a_HOX2a                    <---------At4g35610                        ---------->ID1 -------->AGL15        ------>ZmHOX2a(1)       --------->At4g35610                  <----------DOF2 ---------AGL15      ------>ZmHOX2a(2)   ------>NtERF2  <---------ZAT14         <----------DOF2 ----- ----------AGL3<----------DOF2 --------->YAB1  <---------ZAT2--------->YAB1  <-----------GT1 <------NtERF2   ttatggtactcctcccactttgatcctcaagttttataatctccgactctgctgactctgttctgataatagagttttttttctttctttttggcgcaac  7390700         --------->ZAT6       <-----------GT1   --------------->AGL15   <---------------AGL15   <----------DOF2                                          ------>ZmHOX2a(2) ----->TOE2(3)                                            <---------ARR11(3) ---->RAV1(1)     ------>MYB83                            --------->ARR11(3)    ----------->GT1 ---->REM1(1)     ------>MYB46(1)            <---------HSFB2a(2)           --------->YAB1   ---------   atcaacttttaacagtaaccaaatagacaattacacaatgttatgttccacaaacagtttgatcttgaataagtgtattgtaatgtaacaagggaactca  7390800                                            ------->MYC2                                            <-------MYC2                                            ------->MYC3                                           <---------TGA1a                                           --------->ANAC46                                           --------->O2                                           <---------ANAC55(2)                                           --------->TGA1a                                           <---------O2                                      <---------ARR14(2)                                      --------->ARR14(2)                       --------->ANAC58    --------->ANAC55(2)              ----------->RAV1(1)        =============================================bZIP_DOF             --------->At4g35610        ---------->DOF2--------->ANAC58 <---------REM1(2)         --------->TOE2(3) >GLK1(1)        ------->TEIL   ------->TEIL<-------MYC3        <---------YAB1          --------->AHL20(2)   atatgaaaccaaaagtttgaatctcacgaccatgtatgtgtatacacgtgaaaccatatttcagttttcattagttagcaccacaaacaaaaaaatagca  7390900                                                                                            <--------                                                                                            ---------                                                                                      <---------ICU4                                                                                      --------->YAB1                                                                                     --------->ICU4    <---------AHL20(2)     --------->YAB1                                     ----------->GT1   --------->AHL20(2)   ------>MYB46(1)                                    ----------->RAV1(1)   <---------AHL20(2)   ------>MYB83                    <---------ETT(1)  <----------ID1<---------YAB1   cataaataaatgaattcagagaaaccaaattgtaatcccattagacattctccatattccgacattacaaaataaaacgacagaaaaattatgagatgtt  7391000  Previous    Next  AGI:  At5g22320.1    Description:  leucine-rich repeat family protein. similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT5G19680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48700.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 7388007    to: 7390488    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g22330.1    Description:  ATTIP49A/RIN1 (RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1); protein binding. similar to DNA helicase, putative [Arabidopsis thaliana] (TAIR:AT5G67630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21840.1); similar to putative RuvB-like protein 1,49-kDa TATA box-binding protein-interacting protein [Oryza sativa (japonica cultivar-group)] (GB:BAC83028.1); similar to putative Ruv DNA-helicase [Cicer arietinum] (GB:CAB76908.1); contains InterPro domain TIP49, C-terminal; (InterPro:IPR010339); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain AAA ATPase, core; (InterPro:I Range:  from: 7390799    to: 7394197    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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