Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          ------>ZmHOX2a(2)                                                                        =============================HOX2a_HOX2a                                                                       <------ZmHOX2a(2)                                                                       ==============================HOX2a_HOX2a                                                                      --------->ARR14(3)                             --------->WOX13(1)                       <---------ARR14(3)                      --------->YAB1                                  <---------ARR11(3)                     --------->ICU4                                   <-----------ARR10                   --------->YAB1            --------->YAB1           <---------ARR14(2)                   <---------ICU4         ----------->RAV1(1)         --------->ARR14(2)                  --------->ICU4       --------->ANAC58               --------->ARR11(3)         <---             <---------AHL20(2)        --------->ANAC58               --------->AGP1          ------>ZmHOX2a(1)            --------->AHL20(2)    ---------->DOF2                     <---------AGP1        ---------      --------->YAB1 <---------YAB1    --------->ANAC46    ---------->DOF2          --------->ICU4  -   ctatacaatcagaatttaaaattatgatgagcaatccaaagaagcaacaatgactaaattcaaaagctccaagatcttagtatgcaattactaatcctaa  7339700            ------->GAMYB           --------->MYB46(3)         ----------->RAV1(1)         <---------YAB1                                             <---- ------ATHB12                      --------->YAB1                                     <-------TEIL >YAB1   --------->MYB52(1)   <---------GLK1(2)      ---------->DOF2             --------->AHL20(2)<- ---------->GT1      --------->AHL20(2)         ------->TEIL             <------ZmHOX2a(1)     <-----   tcaagttaatccaacagactaaattatacacagattatcgtgattcaatgcatcttaaagcttattacatagagaggaacgaattacatacatttcgatg  7339800          --------->ZAT14          <---------ZAT14          <---------ZAT18                                                                 --------->YAB1     <---------YAB1                                                              <---------bZIP60(1)   --------->YAB1                                                                --------->ANAC46   <---------ICU4      --------->O2            ------->TEIL                      --------->bZIP60(1) -----MYB46(3)         --------->ANAC46       <---------CCA1(2)               <------ZmHOX2a(2) ------TEIL            <---------O2       --------->At4g35610                <-----------HVH21 ----TOE1(2)         <-----------GT1 <---------CCA1(2)              ---------->DOF2--------->ZAT14<--   gttcatcatcagtgttctctgattcacgagacatatcgcttatcttctgaatctttaaacctcgactcacaaaagtctcgatcacatcactctcataagt  7339900                                                                                                    -                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                  ---                                                                                                  <--                     <----------DOF2           --------->LBD16                                    ---                <---------AHL20(2)           <-----------RAV1(2)                                  ---                --------->AHL20(2)          <-------TEIL                                          <--          --------->ANAC55(2)              --------->GLK1(2)                              --------->LBD16         <---------TOE2(3)                 --------->CCA1(2)              <---------DEAR3(1)     ----         <---------TOE2(2)          ------->GAMYB               <---------WOX13(1)       --------->ANAC46         <---------TOE1(2)         --------->ANAC46           --------->ATHB12          <---------LBD16       <---------MYB52(1)         <---------LBD16            <---------YAB1     ------->TEIL     <--- -------DOF5.7(2)    --------->TOE2(3)---------->DOF2        --------->ICU4--------->LBD16------>NtERF2   aaacgttctcttaggtatttaaactttagtttcttcaacggaaagattcaggggtttacagggatgattgaactagccggtgtatgtctctccgccaaga  7340000            --------->TOE1(3)            --------->TOE2(3)            <---------MYB59 ----->ZmHOX2a(2) ------->GLK1(1) --------GLK1(1) -----ZmHOX2a(2) ------>ARR14(3)                                        ------------>CBF -------ARR14(2)                                       *TSS ------>ARR14(2)                                    --------->ATHB12                         -------- ------>ARR11(3)                                    <---------ICU4                         <---------LBD16 -------ARR11(3)                                   --------->ICU4                     <------MYB46(1) ----->GLK1(1)                                --------->ANAC58         <-----------GT1<------MYB83 -- ------GLK1(1)                                --------->ANAC58  ---------->ID1   <---------YAB1    <-   gatctccgattcaacctaaaacagtcgctggaatgctcagaggtttgaacgaaatgatttcaatttgtttttttttctggtttatgtttggtttccggtt  7340100                                              <---------AHL20(2)                                          --------->ATHB51                                          --------->AHL20(2)                --------->LBD16   <---------ICU4              <---------LBD16    <---------AHL20(2)                --------->DAG2       <---------AHL20(2)        --------->AHL20(2)               ---------->DOF2 ------>ZmHOX2a(2)               <---------ATHB12             ------>MYB46(1) ->LBD16    <-----------GT1      <---------ATHB51  --------->TOE2(3) ------->ARR11(3)             XXXXXXXXXXXXXXXXXXX>MIR3434     ------>MYB83 --------ARR11(3)       <---------ZAT18  <---------MYB52(1)  ----------->RAV1(1)------->GAMYB   tgatcttatttgattttccggtttagtcgactcaaataattccattatttatacattagataccaacataaagcaaaatcaacacacactgaaacaatga  7340200                                                        <-----------GT1                                        <---------At4g35610                                        --------->At4g35610--------->TOE2(3)                                 --------->ATHB12    <---------REM1(1)                                 <---------ICU4     <---------ARR11(3)                                <---------YAB1--------->ANAC58                                --------->ICU4--------->ANAC46                         --------->ANAC58     --------->ANAC58            <------ZmHOX2a(1)                         --------->ANAC46  --------->ZAT14 --------->TOE1(3)                     <---                         --------->ANAC58  --------->At4g35610          --------->YAB1         <-----   aatcaacacaaaaacaaacacaaacacaaacaacatgattacatctgcacacaagatgtaacctcaaaacacaataggaatcaaacttatacaagtttag  7340300                                                                        --------->MYB46(3)                                                                       ------>MYB46(1)                                                                       ------>MYB83                                         ------>ZmHOX2a(1)           ------->GAMYB                                        --------->TOE1(3)            --------->AtMYB61                                        --------->TOE2(3)           <---------MYB52(2)                                       ------>ZmHOX2a(2)            <---------MYB55(2)                                      <------ZmHOX2a(2)             --------->MYB46(3)              -                                     --------->ARR14(2)            --------->ANAC58     <---------ARR14(2)                                     --------->ARR11(3)            --------->ANAC58  --------->ANAC58                                     <---------ARR11(3)         <------NtERF2<-----------HVH21    ---                                     <---------ARR14(2)         --------->ATERF1(1)  --------->ANAC58                 <---------ANAC58    --------->AGP1            --------->ANAC58    --------->MYB52(1)            <---------ANAC58    --------->MYB52(1)             --------->ANAC58  <---------MYB52(2)<- ---ZmHOX2a(1)   <---------ANAC58    <---------GLK1(2)   --------->TOE1(2)  ------->GAMYB        ---- ----TOE2(3)<---------ANAC58--------->ANAC46             <---------LBD16<---------MYB55(2)      -----   gatttaggcctcttgccttccttgtcttccccacaaacagatccttagacttgatcaaaccagggaggcaaccaacaactgtcacaaacggaaactgagc  7340400                                                                                    <---------ICU4                                                                                   <---------YAB1                                                                                 --------->TGA2(1)                                                                                 <---------bZIP60(1)                                                                                 --------->bZIP60(1)                                                                                 <---------TGA2(1)                                                                                <<<<<<<GRF7                                                                              ----------->HVH21                                                                             <---------MYB111(1)                                                                            =========================                                                                            --------->O2                                                                            --------->At4g35610                                                                            ----------->RAV1(2)                                                                            <---------ZAT2                                                                            --------->ZAT2                                                                            <---------At4g35610                                                          <---------ARR11(3)<---------TGA1a       <----------DOF2                                    --------->ARR11(3)--------->TGA1a       ------>ZmHOX2a(1)                               <---------DDF1       <---------O2   <---------DAG2 -------->DEAR3(1)           ----------------->AGL1   --------->ETT(2)      ========================= --->NtERF2           <-------TEIL                    <---------ETT(2)    <---------ALFIN1 <--------- -----NtERF2         --------->CCA1(2)       <---------ANAC46          <-----------GT1    --------->TOE2(3) ----->DEAR3(1) ---------->DOF2              <---------ANAC58      ===================bZIP_DOF ---->MYB46(3) ------>ZmHOX2a(1)             <---------ANAC58      <----------DOF2 --------->ICU4   caccgagtcctttcttcctaaagatacaatggccaactctggaccgggcttgtaagtcgacatcttcttctttttcccacctgacatcattacctttatg  7340500                                                                --------->YAB1                   <---                                                               <---------ATHB12            --------->ANAC58                                                             --------->WOX13(1)            --------->ANAC58                                                        --------->ICU4                     --------->ANAC46        ------->GAMYB                               <-----------HVH21                   --------->MYB46(3) ===============MYC_MYB                            ------>ZmHOX2a(1)                <---------MYB52(2) =bZIP_DOF                                       ----------->RAV1(2)    --------->YAB1 -------->P<--- -DOF2  ----------->RAV1(1)                   <---------At4g35610   <---------AHL20(2)--------->MYB52(1)   ttcttcacaacgacattagcatgagtctctgctatatatccttgtttcatctcctgtcattagcaatcatataatcaaaacaagagactaaccaagaaac  7340600  Previous    Next  AGI:  At5g22130.1    Description:  PNT1 (PEANUT 1); mannosyltransferase/ transferase, transferring glycosyl groups. Identical to GPI mannosyltransferase 1 (PIGM) [Arabidopsis Thaliana] (GB:Q500W7;GB:Q7XZS2;GB:Q9C575); similar to unnamed protein product [Vitis vinifera] (GB:CAO45969.1); contains InterPro domain Mannosyltransferase, DXD (InterPro:IPR007704) Range:  from: 7337161    to: 7340055    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g22140.1    Description:  pyridine nucleotide-disulphide oxidoreductase family protein. similar to pyridine nucleotide-disulphide oxidoreductase family protein [Arabidopsis thaliana] (TAIR:AT3G44190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62380.1); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; (InterPro:IPR001327); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, class-II; (InterPro:IPR000103) Range:  from: 7340125    to: 7341909    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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