Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                    <                                                                      ---------->DOF2              --                                                  --------->ZAT18    <---------ARR14(2)       -------                            --------->ANAC58     --------->ANAC58    --------->ARR14(2)      --------                            --------->ANAC58     --------->ANAC58 <---------ANAC46       --------->ANAC58             <---------At4g35610         <---------MYB46(3)       <---------ANAC58       --------->ANAC58 <---------LBD16   <---------MYB46(3)<---------ANAC58             <---------ANAC58     --------->CCA1(2) --------->HVH21  <---------AtMYB61  <---------ANAC58       --------->ALFIN1       <-----------------   tttgacggagtctgcaactggtggtagaagaagcaaattgggtttgttcgaacgcacaagaggtgtttgcgtaaatgccgaagagagcgatacgaaaaag  7242700                                                                                         --------->HSFB2a(2)                                                                       ---------->DOF2   <---------HSFB2a(2)   --------->ARR14(2)                                            <-----------RAV1(1)   <---------REM1(1) ------MYB46(1)                        <---------ZAT2       ------>NtERF2              <---------ANAC46 ------MYB83           --------->GLK1(1)     <-------TEIL<---------ATERF1(1)        <-----------RAV1(1) ------->MYB59         <---------GLK1(1)   ----------------------->TaNAC69(2)       --------->ALFIN1 -->DAG2        --------->ATHB12   --------->YAB1       --------->ANAC58      <---------HSFB2a(2) -->DOF2        <------ZmHOX2a(1) <---------YAB1        --------->ANAC58      --------->HSFB2a(2) --- ----WRI1  ------>ZmHOX2a(1)   <----------DOF2          --------->ANAC46   --------->ARR11(3)  >>>>>>   ttcggtatcggtcctgaaggattggatttcaagcttttcatagctggttcattcgcactcgcctccattgttgcaaagctctagatgtgttgtagaagaa  7242800                                                             --------->bZIP60(1)                                                         <-------PIF5                                                         ------->PIF5                                                         <-------MYC4                                                         ------->MYC2                                                         ------->MYC4                                                         -------->ABF1                                                         <-------MYC3                                                         <-------MYC2                                                         ------->MYC3                                                        --------->O2                                                        <---------bZIP60(2)                                                        --------->TGA1a                                                        <---------O2                                                        --------->ANAC55(2)                                                        <---------ANAC55(2)                                                        >>>>>>>>>>HY5                                                        >>>>>>>>>>AtMYC2                                                        >>>>>>>>>>ABI5     --------->LBD16                                                        <---------TGA1a   <---------ANAC46                                                       >>>>>>>>>>>>AtMYC2 <---------LBD16                                                    ----------------->PIF3(1)  --------->At4g35610                                                    <-----------------PIF3(1) ------>NtERF2  <-------                  <-----------GT1                <---------At4g35610     <---------LBD16     --------                *TSS                             --------->At4g35610  <-----------HVH21      --------              --------->DAG2                  <------ZmHOX2a(1)<------NtERF2 <---------DEAR3(1) ------->DOF2---------->DOF2               <---------LBD16   <---------bZIP60(1)             <------- >>>TBF1   --------->ARR11(3)     ------------>CBF ----------->HVH21 ----------->HVH21   ------>ZmHOX2a(1)   gaaagcttgagaagataaagttacctccaaacaaaaaacaatatttcaggaagatgacacgtggcatcgctgtgtcccgggggctgtaatcctctagctg  7242900                              <----------DOF2      <---------ARR11(3)   <---------ANAC58      <-----------ARR10    <---------ANAC58                         <----------DOF2      --------->ARR11(3)   <---------ANAC46                        <---------ANAC58 --At4g35610           <----------DOF2                             <---------ANAC58 ->ZAT2           <---------AHL20(2)                          ----------->RAV1(2)      <---------ICU4 ->At4g35610     --------->YAB1                         ----------->HVH21         --------->LBD16 --ZAT2     --------->ANAC55(2)                       <---------At4g35610   <---------ICU4     <-----   agttagaaggtcttacctattaaaactttgcgttttatgtctctctctgatttttctggtgacagcctggctttttaaaaattccacaaaaatggctaat  7243000                    <---------TGA1a                    <---------bZIP60(2)                    <---------O2                    ==================================bZIP_DOF                    --------->O2                    <---------ANAC46                    <---------ANAC58                                                            <----                    <---------ANAC58                                               <---------ANAC58                    =======================================MYC_MYB             <---------ANAC58 <----                    --------->TGA1a                                   --------->AtMYB61         -----                 ----------->HVH21                   ------->TEIL     <---------ALFIN1          <----              <---------ARR14(2)                   ------->GAMYB  <---------ZAT14  ------------------     --------->ARR11(3)                           <---------MYB52(2)  --------->ZAT6            <----     <---------ARR11(3)   <---------DOF5.7(2)     --------->MYB46(3) --------->MYB46(3)         -----   <---------ARR14(2)    <---------WRKY12        <---------TOE2(3)--------->ZAT14  <---------ANAC46   --------->ARR14(2)  <-----------HVH21        <-----------GT1   <---------ZAT18  <---------ANAC58 ----TOE2(3)  --------->ARR14(2)           <----------DOF2 --------->ANAC46    <---------ANAC58 <----   gttcggatatattccaaatccgacgtgtcaacgtttagcgatactctttttaacgaaccatacaccagtccaccactagtttcttacttgtatacatcgc  7243100                                                               ------>NtERF2                                                               --------->LBD16                                                              --------->ANAC58                                  --------->ANAC58            --------->ANAC46 -----ANAC46                    <---------ANAC58              --------->DEAR3(1) -----ANAC55(2)                 <---------ANAC58              --------->ANAC58 ---->O2                        <---------ANAC46             <---------LBD16            --------->ANAC58 -----ANAC58                   <-----------------------TaNAC69(2)--------->DEAR3(1)     --------->ANAC58 --->WRI1             <------NtERF2                         ------>ZmHOX2a(1)           --------->ANAC46 -----ANAC58         --------->LBD16             --------->GLK1(1)              xxxxxxxxxxxxxxxxx>smallRNA(le3) ---->ANAC55(2)     --------->DEAR3(1)           <---------GLK1(1)             --------->ARR14(2) -----O2           <---------LBD16--------->ANAC58    ------>ZmHOX2a(1)        <---------ARR14(2) ---   gtgactatcgtcgtctgtctcgccggagaaaatggcgagcaatcttctccgatttcctcttcctccgccatcgagtcttcatattcgtccaagtaagttc  7243200                                            --------->ZAT18                                            <------NtERF2                                           ------>NtERF2                                           <---------ORA47(2)                                           <---------RAP2.3(1)                                           <---------ATERF1(1)                                           --------->RAP2.6(2)                                           <---------ERF1                                          <---------ATERF1(2)                                          --------->ATERF1(2)                                          <---------RAP2.3(2)                                          <---------RAP2.3(3)                                          <---------DEAR3(1)                                    <---------ARR14(2)                                    --------->ARR14(2)                          <------NtERF2 <---------RAP2.3(1)                         ------>NtERF2  <---------ATERF1(1)                                         -                         <---------RAP2.3(1)--------->ATERF1(1)                                     <            <----------DOF2        <---------CCA1(2)       <----------DOF2                          <           <---------ANAC58  <---------MYB52(1)      --------->HSFB2a(2)                            -           <---------ANAC58--------->DEAR3(1)<---------ALFIN1                                    ----     --------->DEAR3(2)--------->ZAT18 --------->ANAC46   <---------DAG2                 ------------     --------->MYB46(3)<---------ZAT14<---------LBD16<---------HSFB2a(2)                 ------------    ------->TEIL       <---------ABI4(2)--------->LBD16 ------>NtERF2                <xxxxxxxxxxxxxxx --->ZmHOX2a(1)       <---------ATERF1(1)--------->ATERF1(1)                       <---------ETT(2)<-   ctcgtgaaccgatgctttccaagactgcgccgttctcgtatccggcggcactgttcgcgacctttttttttagtatcaaactcggtcgagataagtactc  7243300                                                                                                    -                                                                                                   --                                                                                                  <--                                                                                                  <--                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                <----                                                                                              <------                                                                                              <------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                             <------NtERF2       ------->TEIL            ----------->GT1             --------->ARR14(2)               <-------- -------->ATHB12            --------->ARR14(2)             <---------ARR14(2)              <---------RAP2.6(2) ---------ICU4              <---------ARR11(1)        --------->ANAC46                   <---------MYB46(3) --------HAHB4              --------->GLK1(2)         --------->ANAC58                   <---------bZIP60(2) -------->YAB1              <---------ARR14(2)      <---------ALFIN1                     <---------ANAC46 ----->WOX13(1) <---------ARR14(2)               ----------->HVH21                      <---------AtMYB61 --->AtSPL8     ------->TEIL------->TEIL       --------->ANAC46   ------>ZmHOX2a(1)     --------->ALFIN1 --->AtSPL3     --------->ARR14(2)           <---------ANAC58     --------->HSFB2a(2) --------->ALFIN1 xxxxxsmallRNA(fl3)        <---------ARR14(1)<---------ANAC58     <---------HSFB2a(2) <-----------RAV1(1) --------ATHB12<---------GLK1(2)    --------->GLK1(1) --------->ANAC58              <---------ANAC46-   aatcatttgaatctactgaatcttcaatcgaatctgtgaaatccattacgagcgacacgcctattctcctcgatgtgagtgggatgatgtgtggtggctg  7243400    --------->LBD16  <------NtERF2 ------>NtERF2                                      <-------GAMYB -------->ETT(2)                                  <---------AtMYB61 ------->ATERF1(1)                            <---------At4g35610 -------ATERF1(1)                             <---------ZAT14 ---------HVH21                               --------->At4g35610                  ----------->GT1 ------ANAC58                                 --------->ZAT2                 <---------DEAR3(1) ------ANAC46                            --------->TGA1a                    <---------ZAT2 ------ANAC58                            --------->O2                       <---------At4g35610 --NtERF2                                ===================MYC_MYB         --------->At4g35610 ---DEAR3(1)                             <---------ANAC58                   --------->ZAT2 ---RAP2.3(3)                            <---------ANAC58                   <------NtERF2         --- --At4g35610                             <---------ANAC46                  ------>NtERF2         <--- ->At4g35610                         <-----------HVH21                    <---------DEAR3(1)    <---- ->ATERF1(1)                      ------>ZmHOX2a(2)<---------MYB46(3)    <---------LBD16       <----- -MYB46(3)                    <---------YAB1  <---------ZAT2             --------->LBD16     -------- -------->DEAR3(1)          <---------At4g35610 <---------ANAC46     --------->ARR14(2)    <---------LBD16   cgtcgcccgagttaaatcggttttgatgtctgatgatcgagtcgcgtctgctgtggttaacatgctgactgaaaccgcggctgtgaagtttaaaccggag  7243500                --------->ANAC58                --------->ANAC58                --------->ANAC46             --------->ARR14(2)             --------->ARR11(1)             <---------ARR14(2)           <---------MYB46(3)         <------NtERF2         <---------LBD16        <---------RAP2.3(1)        ------>NtERF2        <---------RRTF1(1)       <---------RRTF1(3)       <---------RAP2.3(3)       --------->ATERF1(2)       <---------RAP2.3(2)       <---------O2       <---------bZIP60(1)       <---------ANAC46       <---------RAP2.6(2)       <---------DEAR3(1)       <---------RRTF1(2)       <---------ATERF1(2)      --------->ATERF1(1)     --------->MYB52(1)    --------->ALFIN1    ----------->HVH21    ----------->TGA1                                                                         <------NtERF2  <---------At4g35610                                                                      <---------ANAC58  --------->At4g35610                                                                      <---------ANAC46 <---------TOE2(3)   <------NtERF2                                                         <---------ANAC58 ------>ALFIN1 --------->SPL7                                                           --------->ALFIN1 ----GAMYB<---------ANAC46                                                      --------->ALFIN1 ---- -----MYB46(3)--------->CCA1(2)        <---------WOX13(1)           <------ZmHOX2a(1) --------->ALFIN1 ----AtMYB61<------NtERF2     <---------At4g35610         <---------TOE2(3) <---------ANAC46--------- ->LBD16<---------ERF1        --------->At4g35610  <---------MYB46(3)      <---------LBD16<---------LBD16   gttgaggtgacggcggatacggcagagagtttagctaagagattgacagagagtggttttgaggctaagaggagagtctcgggtatgggagtggcggaga  7243600  Previous    Next  AGI:  At5g21920.1    Description:  YGGT family protein. similar to YGGT family protein [Arabidopsis thaliana] (TAIR:AT4G27990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43888.1); contains InterPro domain Protein of unknown function YGGT; (InterPro:IPR003425) Range:  from: 7241204    to: 7242816    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g21930.1    Description:  HMA8/PAA2 (P-TYPE ATPASE OF ARABIDOPSIS 2); ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism / copper ion transmembrane transporter. similar to PAA1 (metal-transporting P-type ATPase 1) [Arabidopsis thaliana] (TAIR:AT4G33520.2); similar to copper P1B-ATPase [Glycine max] (GB:ABD64063.1); similar to hypothetical protein OsI_010000 [Oryza sativa (indica cultivar-group)] (GB:EAY88767.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43889.1); contains InterPro domain ATPase, P type cation/copper-transporter; (InterPro:IPR006403); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR Range:  from: 7243132    to: 7248898    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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