Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      <---------------AGL15                                                    --------------->AGL15                                                   ----------------->AGL2                            --------->AHL20(2)<---------GLK1(2)             --------->ANAC58                          ==========================================MADS_MADS             <---------KAN4(2)            ---------->DOF2           --------->YAB1        ---------->DOF2   <---------------AGL15  <-----------GT1 --------->WOX13(1)             -----     <-------GAMYB        --------------->AGL15 <-------TEIL    --------->MYB46(3)  <-------TEIL-----    <---------MYB46(3)  ----------->GT1--------->TOE2(3)   ----------->GT1  --------->ANAC58    -----   tactggctgttaaagaatgacccattttgtataaatagaaaccacaaagattcacccattacagtaacaatcagagccaaggcaagttcatgagaaacac  7242400                                                                                               ------  --------->YAB1                                                                               <----- <---------ATHB12                          --------->ANAC58                              --------->CCA1(2) ---->ANAC58                       --------->YAB1             <-----------HVH21         <---------ARR14(2) ---->ANAC46        --------->TOE2(3)      --------->ANAC58  --------->O2        <---------LBD16 ---- ---->ANAC58 --------->TOE2(3)<----------DOF2           <-----------GT1  ----------->GT1--------->ARR14(2)   acaatcatcttcttaacttaatccataacattctttagcataagcaggctaagagaagttacctcgtcgcacaaaatgtgaaattcggaagataggcgaa  7242500       ---------->DOF2                          --------->AHL20(2)     --------->LBD16                          <----------DOF2     ------>ZmHOX2a(1)                   --------->GLK1(1)                      <---------YAB1 --->ARR14(2)                           <------ZmHOX2a(1)          <---------GLK1(1) ----ARR14(2)              <---------ANAC58   ------>ZmHOX2a(1)    --------->GLK1(1) ----->MYB46(3)            <---------ANAC58  --------->TOE2(3)--------->At4g35610                  --   ccgcttcctgaaagagagggttcttagaggcgagcgaatggaggaatcctttaaatttctcagtagcagaaatcagagactgatgaaagtcttgaatcaa  7242600                                                                                                    <                                                                                                    <                                                                      ---------->DOF2              --                                                  --------->ZAT18    --------->ARR14(2)       -------                            --------->ANAC58     --------->ANAC58    <---------ARR14(2)      --------                            --------->ANAC58     --------->ANAC58 <---------ANAC46       --------->ANAC58             <---------At4g35610         <---------MYB46(3)       <---------ANAC58       --------->ANAC58 <---------LBD16   <---------MYB46(3)<---------ANAC58             <---------ANAC58     --------->CCA1(2) --------->HVH21  <---------AtMYB61  <---------ANAC58       --------->ALFIN1       <-----------------   tttgacggagtctgcaactggtggtagaagaagcaaattgggtttgttcgaacgcacaagaggtgtttgcgtaaatgccgaagagagcgatacgaaaaag  7242700                                                                                         <---------HSFB2a(2)                                                                       ---------->DOF2   --------->HSFB2a(2)   --------->ARR14(2)                                            <-----------RAV1(1)   <---------ANAC46 ------MYB46(1)                        <---------ZAT2       ------>NtERF2              <---------REM1(1) ------MYB83           <---------GLK1(1)     <-------TEIL<---------ATERF1(1)        --------->ALFIN1 ------->MYB59         --------->GLK1(1)   ----------------------->TaNAC69(2)       <-----------RAV1(1) -->DAG2        --------->ATHB12   --------->YAB1       --------->ANAC58      <---------HSFB2a(2) -->DOF2        <------ZmHOX2a(1) <---------YAB1        --------->ANAC46      --------->HSFB2a(2) --- ----WRI1  ------>ZmHOX2a(1)   <----------DOF2          --------->ANAC58   --------->ARR11(3)  >>>>>>   ttcggtatcggtcctgaaggattggatttcaagcttttcatagctggttcattcgcactcgcctccattgttgcaaagctctagatgtgttgtagaagaa  7242800                                                             --------->bZIP60(1)                                                         ------->MYC4                                                         -------->ABF1                                                         <-------MYC4                                                         ------->MYC2                                                         <-------MYC3                                                         ------->MYC3                                                         <-------MYC2                                                         <-------PIF5                                                         ------->PIF5                                                        --------->O2                                                        <---------O2                                                        --------->TGA1a                                                        >>>>>>>>>>ABI5                                                        >>>>>>>>>>AtMYC2                                                        >>>>>>>>>>HY5                                                        <---------TGA1a   <---------LBD16                                                        <---------ANAC55(2)                                                        --------->ANAC55(2)                                                        <---------bZIP60(2)--------->LBD16                                                       >>>>>>>>>>>>AtMYC2 <---------ANAC46                                                    <-----------------PIF3(1)  --------->At4g35610                                                    ----------------->PIF3(1) ------>NtERF2  --------                  <-----------GT1                <---------At4g35610     <---------LBD16     <-------                *TSS                             --------->At4g35610  <-----------HVH21      --------              --------->DAG2                  <------ZmHOX2a(1)<------NtERF2 <---------DEAR3(1) ------->DOF2---------->DOF2               <---------LBD16   <---------bZIP60(1)             <------- >>>TBF1   --------->ARR11(3)     ------------>CBF ----------->HVH21 ----------->HVH21   ------>ZmHOX2a(1)   gaaagcttgagaagataaagttacctccaaacaaaaaacaatatttcaggaagatgacacgtggcatcgctgtgtcccgggggctgtaatcctctagctg  7242900                              <----------DOF2      <-----------ARR10    <---------ANAC58      --------->ARR11(3)   <---------ANAC58                         <----------DOF2      <---------ARR11(3)   <---------ANAC46                        <---------ANAC58 ->At4g35610           <----------DOF2                             <---------ANAC58 --At4g35610      <---------AHL20(2)                          ----------->RAV1(2)      <---------ICU4 ->ZAT2          --------->YAB1                         ----------->HVH21         --------->LBD16 --ZAT2     --------->ANAC55(2)                       <---------At4g35610   <---------ICU4     <-----   agttagaaggtcttacctattaaaactttgcgttttatgtctctctctgatttttctggtgacagcctggctttttaaaaattccacaaaaatggctaat  7243000                    =======================================MYC_MYB                    ==================================bZIP_DOF                    <---------ANAC58                    --------->TGA1a                    <---------TGA1a                    <---------bZIP60(2)                    <---------ANAC58                                                            <----                    <---------ANAC46                                               <---------ANAC46                    <---------O2                                               <---------ANAC58 <----                    --------->O2                                      --------->ZAT6            -----                 ----------->HVH21                   ------->TEIL     --------->AtMYB61         <----              <---------ARR14(2)                   ------->GAMYB  <---------ZAT14  <---------ANAC58     --------->ARR11(3)                           <---------MYB52(2)  <---------ALFIN1          <----     <---------ARR11(3)   <---------DOF5.7(2)     --------->MYB46(3) --------->MYB46(3)         <----   --------->ARR14(2)    <---------WRKY12        <---------TOE2(3)<---------ZAT18  <---------ANAC58   <---------ARR14(2)  <-----------HVH21        <-----------GT1   --------->ZAT14  ------------------ ----TOE2(3)  --------->ARR14(2)           <----------DOF2 --------->ANAC46    <---------ANAC58 -----   gttcggatatattccaaatccgacgtgtcaacgtttagcgatactctttttaacgaaccatacaccagtccaccactagtttcttacttgtatacatcgc  7243100                                                               ------>NtERF2                                                               --------->LBD16                                                              --------->ANAC58                                  --------->ANAC58            --------->ANAC46 -----ANAC46                    <---------ANAC58              --------->ANAC58 -----ANAC58                    <---------ANAC46              --------->DEAR3(1) ---->ANAC55(2)                 <---------ANAC58             <---------LBD16            --------->ANAC58 -----ANAC55(2)                <-----------------------TaNAC69(2)--------->DEAR3(1)     --------->ANAC46 -----ANAC58          <------NtERF2                         ------>ZmHOX2a(1)           --------->ANAC58 -----O2             --------->LBD16             --------->GLK1(1)              xxxxxxxxxxxxxxxxx>smallRNA(le3) --->WRI1           --------->DEAR3(1)           <---------GLK1(1)             --------->ARR14(2) ---->O2           <---------LBD16--------->ANAC58    ------>ZmHOX2a(1)        <---------ARR14(2) ---   gtgactatcgtcgtctgtctcgccggagaaaatggcgagcaatcttctccgatttcctcttcctccgccatcgagtcttcatattcgtccaagtaagttc  7243200                                            <------NtERF2                                            --------->ATERF1(1)                                           <---------ATERF1(1)                                           <---------ERF1                                           ------>NtERF2                                           <---------RAP2.3(1)                                           <---------ORA47(2)                                           --------->RAP2.6(2)                                          <---------RAP2.3(2)                                          <---------ATERF1(2)                                          --------->ATERF1(2)                                          <---------RAP2.3(3)                                          <---------DEAR3(1)                                    --------->ARR14(2)                                    <---------ARR14(2)                          <------NtERF2 <---------ATERF1(1)                         <---------RAP2.3(1)--------->ZAT18                                         -                         ------>NtERF2  <---------RAP2.3(1)                                         <            <----------DOF2        <---------CCA1(2)       <----------DOF2                          <           <---------ANAC58  <---------MYB52(1)      --------->HSFB2a(2)                            -           <---------ANAC58--------->DEAR3(1)<---------ALFIN1                                    ----     --------->DEAR3(2)<---------ZAT14 --------->ANAC46   <---------DAG2                 ------------     --------->MYB46(3)--------->ZAT18<---------LBD16<---------HSFB2a(2)                 ------------    ------->TEIL       <---------ABI4(2)--------->LBD16 ------>NtERF2                <xxxxxxxxxxxxxxx --->ZmHOX2a(1)       <---------ATERF1(1)--------->ATERF1(1)                       <---------ETT(2)<-   ctcgtgaaccgatgctttccaagactgcgccgttctcgtatccggcggcactgttcgcgacctttttttttagtatcaaactcggtcgagataagtactc  7243300  Previous    Next  AGI:  At5g21920.1    Description:  YGGT family protein. similar to YGGT family protein [Arabidopsis thaliana] (TAIR:AT4G27990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43888.1); contains InterPro domain Protein of unknown function YGGT; (InterPro:IPR003425) Range:  from: 7241204    to: 7242816    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g21930.1    Description:  HMA8/PAA2 (P-TYPE ATPASE OF ARABIDOPSIS 2); ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism / copper ion transmembrane transporter. similar to PAA1 (metal-transporting P-type ATPase 1) [Arabidopsis thaliana] (TAIR:AT4G33520.2); similar to copper P1B-ATPase [Glycine max] (GB:ABD64063.1); similar to hypothetical protein OsI_010000 [Oryza sativa (indica cultivar-group)] (GB:EAY88767.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43889.1); contains InterPro domain ATPase, P type cation/copper-transporter; (InterPro:IPR006403); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR Range:  from: 7243132    to: 7248898    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version