Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          <------NtERF2                    <------MYB46(1)                   --------->MYB111(1)               <---------ANAC58                   <---------AtMYB61                 <---------ANAC58                  <--------P --------->ARR11(3)   ------->GAMYB                --------->ALFIN1                --------->At4g35610          --------->ANAC46   <---------ARR11(3) <---------At4g35610     <----------DOF2<------MYB83    <---------At4g35610<-------GAMYB                      --------->ATHB12 ------->YAB1   <---------REM1(1)<---------At4g35610 <---------ANAC46<----------DOF2<----------DOF2   ttgataacttttacccaagtgtaggtgccaagttcttctgatgagtagacaactggcgtttgtatatatagctttgaattgatgacctttcttcattgtt  7240400            <---------MYB46(3)                                                        <----------DOF2            <-----------RAV1(1)                                                       <---------DAG2          <---------At4g35610                ----------->GT1                        <---------At4g35610      --------->YAB1                       --------->ARR11(3)            <----------DOF2   ------>MYB83                  ----------->GT1                      <---------ARR11(3)  -----------   ------>MYB46(1)             ---------->DOF2 <---------ZAT6   <-----------GT1     --------->At4g35610 <---------MYB59        <-------TEIL   ---------->DOF2       ----------->GT1--------->HSFB2a(2)   agaccaaattatagctgttgtacaggttcatagtaaagaaaaaaagatagtgatatatgaacaatgttacaatgtcttttagaatcagctttttgtaaaa  7240500                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                -----                                                                                                <----                                                                                                -----                                                                                                <----                                                                    <-----------HVH21           -----                                                                   ----------->GT1              <----                                                                --------->ALFIN1               <-----                                                              <---------ANAC46             ----------                                                   <---------ARR11(3)                    --------->ANAC58                                                   <---------AHL20(1)                    --------->ANAC58                                                   --------->ARR11(3)                 --------->ARR14(2)                      ---------->DOF2    ------>ZmHOX2a(2)    --------->ALFIN1        <---------ARR14(2) >GT1       ---------->DOF2   <-----------GT1      --------->AHL20(1)               --------->ANAC46   agattgaactaatagaaagagaagaaaagttttaagcatatgatcccttggaatatttttagcagtgtgtggtcacaactgttcaccagaaacgaaagaa  7240600  <----------DOF2 ----->HSFB2a(1) ----->HSFC1(2) ------HSFC1(2) ------HSFB2a(1) ---->GLK1(2) -------ARR10                                                                                 ------- ---->ARR11(3)                                                                                ------- -----ARR11(3)                                                                                ------- ---->ARR14(2)                                               ------------>CBF       <---------ARR14(2) -----ARR14(2)       ----------->GT1                 <---------DAG2                 <---------GLK1(2) ----GLK1(2)   <---------DAG2                  --------->MYB52(1)                   --------->ARR14(2) >DOF2         <----------DOF2      --------->AtMYB61<----------DOF2------>ZmHOX2a(1)--------->GLK1(2)   tcttctttctctcttctctttttgagtaaatagctaaaccataccatctaaacggctttttgaaacaatcctgcaacttgtgttcagattcttaccaaga  7240700                               --------->LBD16                              <---------LBD16                              --------->LBD16                             ------->GAMYB                             <---------LBD16                           --------->MYB52(1)                           -------->P                           ------>MYB83                           ------>MYB46(1)                          --------->MYB55(1)                         <---------MYB111(1)                         <---------MYB111(2)                         --------->AtMYB61 --------->ANAC58        <---------MYB46(2)      -------->P --------->ANAC58        --------->MYB46(3)     <-----------GT1  <---------AHL20(2) --------->ANAC46        <---------MYB55(2)---------->DOF2      --------->AHL20(1) -->ANAC58      <---------At4g35610    ---------->DOF2          <---------AHL20(1) -->ANAC58      --------->At4g35610 ----------->GT1          --------->AHL20(2)                    <- -->ANAC46    <-----------RAV1(2) <------------CBF         <-----------TBP            <---------YAB1<   aacaagccattttagttcagatgaacaccaaccggggattgtaaagaaagttaccagttgtttttatatattttgtactggcatttttctgatggaaacg  7240800                                                                          <---------ZAT18                                                                       <---------ANAC58                                           <----------DOF2             <---------ANAC58                                         --------->HSFC1(2)           --------------->AtSPL3                      <------MYB83  --------->LBD16           <---------DEAR3(2)                <---------ANAC46   <---------HSFB2a(2)       <---------At1g77200              --------->ATHB12     <---------LBD16           --------->ETT(1)       --------->ANAC46             <---------ATHB12--------------->AGL15          <<<<<<<<<<DREB1A      <---------ALFIN1<--             ----------->HVH21     --------->HSFB2a(2)  <---------ANAC58  --------->ZAT14   --------- --------ARR11(3)     <------MYB46(1)    <---------HSFC1(2) <<<<<<<<<<DREB2A     --------->MYB46(3) ------ZmHOX2a(2)    <---------AtMYB61<------ZmHOX2a(1) <---------ANAC58  <---------ZAT14--------->REM1(1)   ggatcatccagcccgatgatggggaggtttactacttccaggaagcttttggccataagcttgtcggtactagccgtgctctcaccactctacatcgaca  7240900               <---------HSFC1(1)               <---------HSFB2a(2)              ================HOX2a_HOX2a              ------>ZmHOX2a(2)             =================HOX2a_HOX2a             --------->CCA1(2)             <------ZmHOX2a(2)            <---------ARR11(3)            --------->ARR14(2)            <---------ARR14(2)            --------->ARR11(3)            --------->AGP1            <---------ARR14(3)            <---------AGP1            --------->ARR14(3)--------->ARR11(3)        <------ZmHOX2a(1)     <---------ARR11(3)     --------->At4g35610   >>>>>>>>>TBF1 <---------DAG2  <---------YAB1       <------ZmHOX2a(1) <----------DOF2                                            - -------GLK1(2)--------->HSFB2a(2)     --------->At4g35610           ------>ZmHOX2a(1)            --- >ETT(2)=============HOX2a_HOX2a       <---------At4g35610   <---------At4g35610               ------   gattatcagaggaagatctagaagaggaagaagaactcttcagctttatgttttccttctctctgcttctcctcttgttgattttagccatagccttgtc  7241000                                                                         <---------ANAC46                                                                         <---------ANAC58                                                                     <---------ANAC58                                                                     <---------ANAC58                                                                <---------ANAC46                                                                <------MYB46(1)                                                                <------MYB83                                                               --------->MYB55(2)                                                               <---------AtMYB61                                                               <---------MYB46(3)                                                               --------->MYB52(2)               <---------ANAC58                                --------->MYB46(2)              --------->ZAT2                   --------->ANAC58--------->MYB111(2)      ----------->HVH21          ------>ZmHOX2a(1)            <---------MYB55(1)  --------->ZAT14    <-----------RAV1(2)   <-----------GT1   <---------MYB52(1)  <---------ZAT14 <---------WRKY18(1)   --------->ARR14(2) --------->MYB52(2)      ------>ZmHOX2a(1) -------->REM1(2)----------->HVH21      <---------ARR14(2)<-------TEIL<---------WOX13(1) --->ZmHOX2a(1)<---------ANAC58------>ZmHOX2a(2)       <---------MYB46(3)<---------ANAC58------>ZmHOX2a(1) ---->ID1     <---------ZAT2   <---------ICU4  --------->ANAC58--------->MYB111(1)--------->TOE2(3)   cttgtacagtgacccgagcttgaccaggtttgatccttactggattcacaggctatgtggttcgtttggtggattgcttgtcatcctcatccttcttgtt  7241100                            --------->GLK1(2)                            <---------ARR14(2)                      ---------->DOF2                            --------->ARR14(2)                  >>>>>>>>>TBF1                       <--------P    ---------->DOF2       <---------ATHB12                 <--------            ---------->DOF2 <-----------ARR10        ----------->RAV1(1)                 <---------ICU4         --------->AtLEC2  <---------GLK1(2)      --------->bZIP60(1)       <---------CCA1(2)   ttcgtcttgatatgcaaagcctctggttagaatctgagcgaaagttgttttgatgccacaaatgaagaagaaaagctcatctcttgcaaaatttttacaa  7241200                                                                                      --------->AHL20(2)                                                                                      <---------AHL20(2)                                                                                     --------->AHL20(2)                                                                               ----------->GT1                --------->ANAC58                                           <-------TEIL            --                --------->ANAC58                                          --------->CCA1(2)       ---             <------ZmHOX2a(1)                                  <---------GLK1(1)    <---------AHL20(1)           >>>>>>>GRF7                               --------->ANAC46    --------->ARR11(3)     -----      ------->TEIL      <----------DOF2            <-----------GT1       --------->ARR11(1)   ------- ---GT1 <-----------HVH21              ---------->DOF2          --------->GLK1(1)    <---------AHL20(2)   tatttctgtatgtcaggaacacaactcttttattcattttctaaagaaaatttatacaaaactcagaaatccaaagatacagagtaataaaattactcga  7241300  Previous    Next  AGI:  At5g21900.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G06040.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65254.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101) Range:  from: 7238200    to: 7240485    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g21910.1    Description:  unknown protein Range:  from: 7240819    to: 7241130    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g21920.1    Description:  YGGT family protein. similar to YGGT family protein [Arabidopsis thaliana] (TAIR:AT4G27990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43888.1); contains InterPro domain Protein of unknown function YGGT; (InterPro:IPR003425) Range:  from: 7241204    to: 7242816    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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