Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <---------GLK1(2)                            ------->GAMYB                         --------->MYB52(1)                         ----------->RAV1(1)                                        --------->TOE2(3)                  --------->YAB1                                                 ----------->RAV1(1)     --------->AtLEC2--------->ZAT18                  ---------->DOF2           --------->REM1(1) <---------At5g28300 <---------ZAT18                 --------->YAB1        --------->ARR11(3) --------->HVH21  ---------->DOF2                   <---------ATHB12       <---------ARR11(3) -------ARR10     <--------ATHB1                   ------>MYB46(1)        --------->GLK1(1) --->O2 ---------->DOF2 --------->ANAC46           ------>MYB83           <---------CCA1(2) <-------- ----ALFIN1      <---------ATHB12                 --------->WOX13(1)   ------>ZmHOX2a(1)    ------>ZmHOX2a(1) --ALFIN1        <---------ATHB51             <-----------GT1          --------->LBD16 --------->WOX13(1)   tctcaccgtgcaaaggccaataatgcacaacagaattttgcaagtttttcaccaatcaaagcagaatacattcctgatatctacaacatcaatccttttt  7215600                                                                 <---------O2                    --------->TOE2(3)                            --------->O2                  <---------ARR11(3)                             --------->ANAC46                  --------->ARR11(3)                             --------->ANAC55(2)                  <-----------ARR10                              <---------ANAC55(2)                 <---------GLK1(2)                             ------------->DYT1     <---------AHL20(2)                             --------->ATHB12                             <---     --------->AHL20(2)       ----------->GT1      <---------AHL20(2)                            <--- --DOF2<-----------GT1       <XXXXXXXXXXXXXXXXXXXXMIR426    --------->REM1(1)                    <---   tcaacaattaaactactcaaaatctcaacatatggataaatttcccaaaacatttcattgctgcatcacgagactgaaccagaacaagaacaaaacacag  7215700                                                                --------->YAB1         ------->TEIL                                          <---------ATHB12                <-----      <---------YAB1                  ------>ZmHOX2a(2)    --------->ANAC58           --------->YAB1 ------ANAC46                       <---------ARR11(3)     --------->ANAC58          <------ZmHOX2a(2) ------ANAC58                       --------->ARR11(3)     --------->ANAC46         --------->ARR11(3) ------ANAC58               ---------->DOF2          <---------MYB52(2)             <---------ARR11(3)   cgtgagtcatgaatcgctatcgaattagccaaaagctagatcgttcacaagtgaaacaaacacgaatcatacagaaaactgaagaagatcataaatctgt  7215800                                                              ---------->DOF2                                                           --------->LBD16                                                         ===================================HOX2a_HOX2a                                                         ------>ZmHOX2a(2)                                                        ====================================HOX2a_HOX2a                                                        <------ZmHOX2a(2)                                                        --------->CCA1(2)                                                       <---------AGP1                                                       --------->ARR11(3)                                                       <---------ARR11(3)                                  <---------ICU4       --------->AGP1                                  --------->ATHB12     --------->ARR14(3)                                  --------->YAB1--------->ANAC46                     --------->ANAC46  ----------->GT1 --------->ARR14(2)                  --------->ARR14(2)   --------->LBD16 <---------ARR14(2)               --------->HSFB2a(2)         --------->LBD16--------->SPL7<---------LBD16  <---------ARR14(3)               <---------HSFB2a(2)        <---------HSFC1(1)       <---------ATHB12  ---------->DOF2                   ------>ZmHOX2a(1)        <---------HSFB2a(2)      <---------YAB1 --------->ANAC58--------->ANAC58    --------->TOE2(3)        --------->HSFB2a(2)      --------->ICU4 --------->ANAC58--------->ANAC58  ------>MYB46(1)  -- ------HVH21      <---------ARR14(2) <---------LBD16 ----------->ARR10            ------>MYB83     --   caaacaaattccagaactcgtatacggacggagtaatcatcggggaaaaaacgcaaagatctgggaaagaaacataccatcaccatccttatcgaagagg  7215900                                 <-----------HVH21                       ------>ZmHOX2a(2)                      <------ZmHOX2a(2)                      --------->CCA1(2)      --------->LBD16                      <---------RVE1(1)                     --------->AGP1          ------>NtERF2                       --------->ARR14(2)                     --------->ARR11(3)     --------->ANAC58                     <---------ARR11(3)                     <---------ARR11(3)     --------->ANAC46             --------->GLK1(1)                     --------->ARR14(2)  --------->ARR14(2)              <---------GLK1(1)                     <---------AGP1      <---------ARR14(2)          --------->HSFB2a(2)                     <---------ARR14(2)----------->ARR10             <---------HSFB2a(2)                    --------->GLK1(1)<---------At4g35610       <---------------AGL15        <---------ANAC46    <---------WRKY38(1)                <----------DOF2   <---------GLK1(2)        <---------ANAC58    <---------WRKY12--------->ANAC58   --------------->AGL15        <---------ANAC58  <-----------HVH21------>ZmHOX2a(2)  <---------DAG2     <---------ARR14(2) -------->DOF2      <---------GLK1(1)--------->At4g35610      <-----------------AGL3<---------AHL20(2) ------->MYB52(1)  ----------->ARR10 <---------ZAT2        <-----------GT1     <---------TOE1(2)   ctaaaggcttccttgaactctgagatctggtcatcggtgagctgatccgccattttccttcttacctttttttagaaatcccagattttttttttgctac  7216000                         -------->HAHB4                                        xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                   --------->YAB1                                          <------MYB46(1)          <-----------GT1<---------ICU4                                    <------MYB83     <---------AHL20(2)  <--------ATHB1                                <---------MYB46(3)  <---------AHL20(2)    <---------YAB1                                 --------->ATHB12        <-----  --------->AHL20(1)    <---------ATHB51                              <---------YAB1           ------  --------->ARR11(3)    --------->ICU4                   --------->ZAT18 <--------P       <----------  <---------ARR11(3)  *TSS                    ---------->DOF2         <---------TOE2(3)--------->ARR11(3)  <---------AHL20(1)  --------->YAB1        <---------YAB1     --------->MYB46(3)      <---------ARR11(3)  --------->AHL20(2)  <---------ICU4   <---------At4g35610     <---------MYB111(2) ---------->DOF2   tgaatatattatttgcctctctaataataattcagcaagagagcttataaaagagagagagcccaacaacttatggttgggcctctaaagatttactagc  7216100                                                                                <---------AHL20(2)                           <----------DOF2                                     <---------MYB52(1) ----STY1(2)       <---------AHL20(2)                   ---------->DOF2      ----------->GT1 --->STY1(2)  <---------YAB1                         --------->YAB1     <----------DOF2 -GT1   --------->ICU4   ---------->ID1              --------->AHL20(2)--------->TOE2(3)            -   taattcagtaattcttatgatttttttgtctttttagtttagttttttaagacaattataaagaaaactataacctttgcagttaatttagacatatata  7216200                                  <---------AHL20(2)                                 <---------AHL20(2)                                 <---------AHL20(1)                                 --------->AHL20(2)                              <---------AHL20(2)                             <---------AHL20(2)                          <--------HAHB4                          -------->ATHB1                          --------->ATHB51                          --------->YAB1                          --------->AHL20(2)                                        --------->WOX13(1)                          <---------ICU4                                   --------->ZAT6                         <---------YAB1                                   <---------At5g28300                         --------->ICU4                                  <-----------GT1              --------->YAB1<---------YAB1                           <---------AHL20(1)             -           --------->WOX13(1)--------->AHL20(2)                      --------->AHL20(1)         <----      <---------AHL20(2) <---------ATHB51                            --------->ARR11(3)<---------AHL20(2) ---------->GT1     <-----------GT1     <-----------GT1              <---------ARR11(3)--------->AHL20(2)   ctaggtaataaatctatcaaattaacaattattaattttttttgactattttcaaaactgatttagtagaatattttacagtatatcaattaaacttttg  7216300                                                                     <---------------AGL15                               ---------->DOF2                    <---------AHL20(2)                            <---------YAB1                    --------->ARR11(3)                          --------->YAB1                      <---------ARR11(3)                          --------->AHL20(2)               <---------TOE1(3)       <---------AHL20(2)                      --------->AHL20(2)                   <---------TOE2(3)----------->GT1                      <---------AHL20(2)             <---------CCA1(1) <---------AHL20(2)                  --------->AHL20(2)                 <---------RVE1(1)--------->AHL20(2)     <---------AHL20(2)  <---------YAB1             <---------ARR11(3)<---------AHL20(1)   <---------YAB1 <---------AHL20(2)                --------->ARR11(3)<---------AHL20(2)  <---------AHL20(1) --------->AHL20(2)           ----------->ARR10 <-----------------AG          --- -------->ICU4<---------AHL20(2)               <------ZmHOX2a(1)  --------->AHL20(2)             <--- -------GT1   --------->AHL20(2)           --------->TOE1(2) <------ZmHOX2a(1)     --------->AHL20(2)   acattatttttttcatttaaatatttaattataaaaagtttttaaactaggatagatatttaaggatattaattaatttggaaaattaaaaaaaaactta  7216400                                                                           --------->GLK1(1)                                                                          --------->ARR14(2)                                                                     --------->MYB52(1)                  <---------AHL20(1)                                --------->ARR14(2)                  <---------AHL20(2)          --------->ARR14(2)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                  --------->ARR11(3)          <---------ARR14(2) <---------HSFB2a(2)               --------->AHL20(2)    <---------ICU4              --------->HSFB2a(2)             --------->AHL20(2)      -------->HAHB4         --------->ANAC55(2)                 <----          --------->AHL20(2)        --------->ICU4          --------->ANAC46       --------->ANAC46     ----------->GT1  ----------->GT1--------->ATHB12       <---------ANAC55(2)    --------->ANAC58 --------->ARR11(3)--------->CCA1(2)<---------ATHB12       <---------TOE2(3)       --------->ANAC58 ------>YAB1 --------->AHL20(1)     <---------YAB1------>ZmHOX2a(1) <---------ARR14(2)         <xxxxx ------YAB1 --------->YAB1<-------TEIL <---------YAB1     <-----------GT1 <---------ARR14(2)  <------   taatatgttgaaaaaaataatatatggatacatatgaaatgattagagtatcctctaaatttacgttacagaaacggatatgtataagcaaaaattttac  7216500  Previous    Next  AGI:  At5g21274.1    Description:  CAM6 (CALMODULIN 6); calcium ion binding. Identical to Calmodulin-6 (CAM6) [Arabidopsis Thaliana] (GB:Q03509); similar to CAM7 (CALMODULIN 7), calcium ion binding [Arabidopsis thaliana] (TAIR:AT3G43810.1); similar to calmodulin 4 [Daucus carota] (GB:AAQ63461.1); similar to calmodulin cam-210 [Daucus carota] (GB:AAT73623.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) Range:  from: 7214503    to: 7216022    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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