Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <------ZmHOX2a(1)          --------->DAG2                 <----------DOF2                    ----------->RAV1(1)                 ---------->DOF2                  <---------DAG2 -----DOF2         --------->ANAC58         ---------->DOF2----------->GT1            --------->ARR11(3) -ARR11(3)         --------->ANAC58----------->GT1   ------>ZmHOX2a(2)                <---------ARR11(3) >ARR11(3)   ---------->DOF2   =============================HOX2a_HOX2a    --------->ALFIN1   tagcaccaaaattgataaagaacgacataaataggaatggtgaagaaaaagatgatcccaaaggtagaaaacagtaagtggagaagaagagcttttttgt  7191800                                                                                                    -                                                                                                    -                                                                                                -----                                     <---------YAB1                                          <-------                                  --------->GLK1(2)                                     --------->MYB52(1)                                 <---------ARR11(3)                 --------->YAB1     <---------ARR14(2)                        <-----------RAV1(1)                        <------ZmHOX2a(2)   --------->ARR14(2)                      <---------At5g28300<---------AHL20(2)       --------->ARR11(3)   --------->MYB52(1)            --------->MYB46(3)   <---------GLK1(2)                <---------ARR11(3)   <-----------GT1   tactagtatattcaacaactcattcactgttgcaagattctaatttatagatgtgttaacttgaaccagatcataacaaataagatgaataaccggttta  7191900                                   --------->YAB1                              <---------ATHB12                             ------>MYB83                             ------>MYB46(1)                           <---------MYB111(1)               <---------DOF5.7(2)                 --------->YAB1    --------->AHL20(2)  <---------ANAC58             --------->ZAT6--------->MYB46(3)          <---------ANAC58        --------->ARR14(2) <---------MYB46(2)          <---------ANAC46 ------>TEIL--------->ZAT18<---------MYB111(2)       <-----------GT1 -------->MYB52(1)         --------->AtMYB61         <---------AHL20(2) ---------->AtSPL8         <---------MYB55(2)<---------ARR14(2)                            --------->GLK1(2) ---DOF2<---------ARR14(2)--------->ANAC46   --------->ARR14(2)                         <---------YAB1   agtacctgaatatttgcactagtaatccaccaaacaatgaaattccatatactatttacttgtaaacgatttgattctatatatactcttaagattccat  7192000                 --------->TOE2(3)                --------->YAB1              ------>MYB83              ------>MYB46(1)                                           --------->ANAC46             --------->MYB55(1)                                         --------->ANAC55(2)            <---------MYB111(1)                                         --------->ANAC58            <---------MYB111(2)                                 --------->YAB1            <---------MYB46(2)                                  --------->AHL20(2)            <---------MYB59                                  --------->YAB1--------->MYB52(1)            <---------MYB52(2)                              <---------ATHB51        ----------->GT1           --------->At4g35610                  <---------GLK1(2)       --------->ANAC58           <---------ANAC55(2) --------->ARR14(2)         --------->YAB1<---------ANAC55(2)           --------->ANAC55(2) <---------ARR14(2)        --------->ZAT6 --------->ANAC55(1)       ---   ataacatcgaatcacctaacattattttgtccaaatccaaattgtttctaaattctctaacaataataaaaaaaacgtaacgagagaagtaaattgataa  7192100                                                                                                   --                                                                                                  <--                                                                                                  <--                                                                         ----------->TBP         <---                                                                    ------>MYB46(1)              <---                                                                    ------>MYB83                 ----                                                                    -------->P                  <----                                          <---------TOE2(3)       <---------MYB59               <----                                     <---------ICU4               <---------MYB111(1)          <-----                                    --------->AHL20(2)            <---------MYB111(2)         -------                                    <---------AHL20(2)            <---------MYB46(2)        <--------              ---------->DOF2       --------->ICU4             <---------PCF2               <--------          ---------->DOF2           <---------ATHB51           --------->TCP15(1)    <---------ANAC46       --------->ANAC58           --------->YAB1 ---------->DOF2--------->PCF2       <---------ANAC58       --------->ANAC58         --------->AHL20(2)     <<<<<<<<<<<<<<<<<LFY          <---------ANAC58 ------>ARR11(3)            ----------->GT1  ---------->DOF2--------->ALFIN1<-----------GT1 <--------   gacattgaaacgaaaagaaaggaatatggagcgaaaaaataattaagaaaagaaagaaaacagtgggacctacctataaaacctcttgcgtcttgcgtct  7192200      <----------DOF2  <----------DOF2 ---->NtERF2 -------DEAR3(1) -------RAP2.6(2) ------At4g35610 ------LBD16 ----->At4g35610 -------RAV1(1) -----ATERF1(1)    <---------ALFIN1 ----DEAR3(1)    <---------ALFIN1 ---->RAV1(2)  ----------->RAV1(1)                                     --------->YAB1 -ANAC46      --------->ANAC46            *TSS           <----------DOF2  <---------ICU4 -ANAC58      <----------ID1             --------->AtMYB61    <<<<<<<<<TBF1 -ANAC58    --------->ANAC46 <---------AHL20(2)   <---------MYB52(2)------>ZmHOX2a(1)   gcggctttctttataagcgacacacctatattttagtgaatcaccaaaacaaacaaaccctttcttcttcctctcataatccctctctctcttcttctct  7192300                 <---------TOE2(3)                 <---------TOE1(3)              <---------TOE1(1)       <---------ZAT14                          <---------TOE2(1)       --------->ZAT14                  <---------HSFB2a(2)       --------->ZAT2                   --------->HSFB2a(2)   <-----------GT1       <---------ZAT2            <---------CCA1(2)<---------TOE1(2)                ------->TEIL     <   ctcgctcgctgctctgtttagggtttttctcgttcgtctcttctataagtactaggtttgttttttactcaaaaatcgttcaatgtatgttcgattttga  7192400                                                                              <---------ZAT6                                                                          <---------MYB52(1)          --------->ATHB12                                              <----------DOF2         <---------YAB1                           <----------DOF2     <---------At4g35610           <       <---------AtLEC2                       ---------->ID1        --------->ZAT18               <--       --------->YAB1                 <---------MYB46(3)            <---------ZAT14 <---------At4g35610     --------->AtLEC2    <---------ANAC46    <-----------GT1        --------->ZAT14 --------->At4g35610 ----------DOF2 ------>ZmHOX2a(1) <---------AtMYB61            <---------GLK1(1)    -----------------   agctttcatgcatgattcctgttcatttcgtcgattttggtggtttttttctcttttttttagcgatttctgcgctgttagtgttcatctgtatttttcg  7192500           ----------->GT1         <---------ANAC58         <------MYB83         <------MYB46(1)         <---------ANAC58         <---------ANAC46        --------->MYB46(2)        <---------AtMYB61        <---------MYB46(3)        --------->MYB55(2)        --------->MYB52(2)       <---------MYB55(1)      <---------MYB52(1)   <------NtERF2 <---------DEAR3(1) ------NtERF2                  ---------->ID1                         <---------ZAT6 -------DEAR3(1)             <-----------RAV1(1)             --------->WRKY18(1)      ------->TEIL ---->WRI1 <---------ZAT6<---------YAB1         <---------LBD16 <---------YAB1 <---------TOE2(3)   tcgtcgtcgtttggtgttaaacaagtgatttttgttgtttcatgagtttctctggattttttggtcatggtagtgtttgtttatgttgaatctcactgtt  7192600                    <---------MYB46(3)                    --------->MYB52(2)                   <-------TEIL                  <---------MYB52(1)                <---------ANAC46               <-------TEIL            <---------ZAT2  --------->ANAC55(2)            <---------At4g35610            --------->At4g35610            --------->ZAT2  <---------ANAC55(2)      <----------DOF2<-------GAMYB                 <---------At4g35610   <-----------GT1    <---------------AGL15 <-----------GT1    <<<<<<<<<TBF1<---------ARR14(2)         <---------------  ---------->ID1<---------ANAC58       ---------->ID1     --------->ARR14(2)    <---------LBD16 <-----------GT1<---------ANAC58<---------ARR11(3) ------>ZmHOX2a(1)<---------AHL20(2)      ---------   ttttttctctttgaagctgcgttcgttgttacatgattttcgtcttcttcttcctctgagtaatcgctgtttatttttctactctggattttttgttttt  7192700  Previous    Next  AGI:  At5g21150.1    Description:  PAZ domain-containing protein / piwi domain-containing protein. similar to PAZ domain-containing protein / piwi domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G21030.1); similar to AGO6 (ARGONAUTE 6), nucleic acid binding [Arabidopsis thaliana] (TAIR:AT2G32940.1); similar to AGO4 (ARGONAUTE 4), nucleic acid binding [Arabidopsis thaliana] (TAIR:AT2G27040.1); similar to AGO4-2 [Nicotiana benthamiana] (GB:ABC61505.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67397.1); similar to AGO4-1 [Nicotiana benthamiana] (GB:ABC61504.1); contains InterPro domain Argonaute and Dicer protein, PAZ (InterPro:IPR003100); contains Int Range:  from: 7192242    to: 7198327    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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