Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        <---------AHL20(2)                                            <----------DOF2      --------->AHL20(2)            --------->MYB52(1)          <---------ARR14(2)   --------->ARR11(3)              --------->TOE1(2)            --------->ARR14(2)   <---------ARR11(3)             <---------MYB52(2)          <---------MYB46(3)   --------->AHL20(1)          <----------ID1                --------->ALFIN1   <---------AHL20(1)   --------->ANAC58               --------->AHL20(1) -------HVH21           --------->ANAC58               --------->AHL20(2) --ANAC58         <---------At5g28300 <---------MYB52(2)<---------AHL20(2) --ANAC58  <-----------GT1------->GAMYB                <---------AHL20(2) ---AtSPL8<-----------GT1--------->MYB46(3)            <---------AHL20(1)               <---------TOE2(3)   tcaaatatttttttaacagttactgcaaccaaaaaaacaaacgaacaatttcatcaatataatgtggttcctttaacaacattcaacatcaaggtaccca  7189200                                                                                                   --                                                                                                   <-                                                            ------->MYC3                     --------                                                            ------->MYC2                    ---------                                                            <-------MYC2                    ---------                         --------->CCA1(2)                  <-------MYC3                   <---------YAB1                        <---------ARR14(2)           <---------At4g35610                   <---------ATHB12                        --------->ARR14(2)           --------->At4g35610                   <<<<<<<<<ARR2                    <-----------RAV1(2)            --------->YAB1                          <<<<<<<<<ARR1             <---------MYB52(1)                   <---------ATHB12--------->ICU4         --------->WOX13(1)            --------->TOE2(3)                   --------->WOX13(1)<---------ATHB12--------->At4g35610        <-----------GT1<------ZmHOX2a(1)<-----------GT1----------->RAV1(1)        --------->ZAT2 <---   gtaattcaattcacccttagcatcaggatacaagtctacaataaacctttcaatcagcagcatatgcaataactaaaccagaccagctaaacaatcatag  7189300                                                    --------->ANAC46              <---------ARR14(2)                  --------->ANAC58  ----------->GT1                                 --------->ANAC46 ------->GLK1(1)                        --------->LBD16 --------GLK1(1)  <---------YAB1       <---------ANAC55(2)                            <---------AHL20(2) ->TOE1(2)    <---------GLK1(2)        --------->ANAC55(2)                      --------->YAB1 >ATHB12      --------->ARR14(2)       --------->ANAC46                         ----------->GT1<----- >YAB1   <-----------GT1   --------->YAB1         --------->ANAC58            --------->ARR14(2) ---ZmHOX2a(1)--------->ARR11(3)      <---------LBD16 ---------->DOF2 <-------TEIL   --------->AHL20(2)   gaattcgtaaattacagattttgattcaatagaaattcaatccggaattaacacacaaaagtaagtttgatattcatccgaatcgtattaaataagagga  7189400                             --------->At5g28300                             <------NtERF2                           <---------DEAR3(1)                           <---------ANAC46                          <---------ABI4(1)                          <------NtERF2                         <---------RRTF1(1)                         <---------ERF1                         ------>NtERF2                         <---------RAP2.3(1)                        <---------DEAR3(1)                        <---------RRTF1(2)                        <---------RRTF1(3)                        <---------RAP2.6(2)                        <---------ANAC46                        <---------O2                        --------->ATERF1(2)                        <---------ATERF1(2)                        <---------bZIP60(1)                        <---------RAP2.3(2)                        <---------RAP2.3(3)                       --------->ATERF1(1)                      <---------ATERF1(1)                     ----------->TGA1                     ----------->HVH21                    <-----------HVH21                   <---------At4g35610                   --------->LBD16                  <---------DEAR3(1)   <---------ANAC46                  <---------ATERF1(2)  <---------ANAC58               <-----------RAV1(1)     <---------ANAC58            --------->ARR14(2)   <---------YAB1                                                     <           <---------GLK1(1)<---------MYB46(3)--------->GLK1(2)              ---------->DOF2        <     <---------O2 --------->ATERF1(2)  ----------->GT1              ----------->GT1            <----- -ZmHOX2a(1)<---------ARR14(2)   --------->ICU4                <------ZmHOX2a(1)          <---------TOE2(3)   gagcgagacctgggtttctgccggtgacggcggtgaagattgagtgaaattctttctccttgagaggacctcgtgaaatcaaagcctgaattagggtatg  7189500      <---------ZAT2                <---------MYB52(1)                              --------->ATHB12      <---------At4g35610          --------->LBD16                                 <---------YAB1      --------->ZAT2   ------>ZmHOX2a(1)                                       ------->TEIL      --------->At4g35610         --------->ANAC46    --------->DAG2  --------->GLK1(2) ---------ANAC58      --------->TOE1(3)          <---------YAB1       --------->ARR14(2) ---------ANAC58      --------->TOE2(3)   <-----------GT1             <---------ARR14(2) ----AtMYB61    ------>NtERF2     --------->ANAC55(2)---------->DOF2 <---------GLK1(2)<---------WOX13(1)   gtgcttccagcttagcgatgccatccttagagacctccgtaatttcacagtatgaaaaagctagggttttagaatctggtgaaccctgattgtttctgtg  7189600                                                                                            <--------                                                                                            ---------                                                                                           <---------AHL20(2)                                                                                           --------->AHL20(2)                                                                                          <---------AHL20(2)                                                                                 ------>NtERF2                                                                                --------->ANAC58                                                                                <---------bZIP60(1)                                                          <------NtERF2         --------->bZIP60(1)                                                         --------->LBD16        --------->ANAC46                                    --------->At5g28300 <---------ANAC58        --------->ANAC58                                  <---------DEAR3(1)    <---------ANAC46        --------->TGA2(1)                                 --------->ZAT18        <---------ANAC58        <---------TGA2(1)                             --------->DAG2     --------->ANAC58              <---------TGA2(2)                  <---------LBD16--------->ZAT14--------->ANAC58             ----------->HVH21              <---------MYB46(3)--------->ALFIN1<---------ANAC55(2)  --------->ETT(2)  <---------AHL20(2)              <-----------RAV1(1)<---------ZAT14--------->ANAC55(2)<---------DOF5.7(2) --------->AHL20(2)  <---------TOE1(3)   *TSS  ---------->DOF2   --------->CCA1(2)  --------->DOF5.7(2)  --------->AHL20(2)  <---------TOE2(3)<---------ANAC46<---------ANAC46    <---------LBD16       ----------->TGA1    >>>>   aattagggttttgtatttgttggggagacagaaagtgcggtgagagagagacggaatggcgggaagcgttatcgacacgatgacgccataaaattatttt  7189700                                                                                                    <                                                                              <-------GAMYB        --                                                                             <---------MYB46(3)   <--                                                                            <---------TOE2(3)     ---                                                                        <---------ANAC58          <--                                                                        <---------ANAC58          <--                                                                        <---------ANAC46          <--     <------------CBF                                               <-------GAMYB                ---- --------->ANAC58                  <----------DOF2     <-------TEIL--------->MYB52(2)      --------->At5g28300 --------->ANAC58             <---------AHL20(2)   --------->DAG2  <---------MYB46(3)     ----------- <---------ANAC55(2)         --------->AHL20(2)   ---------->DOF2  --------->MYB55(2)    <------NtERF2 --------->ANAC55(2)     <---------AHL20(2)    --------->ANAC58  <---------MYB52(1)      --------->ALFIN1 -AHL20(2)             <----------DOF2         --------->ANAC58<---------ANAC46        <---------ANAC58 >AHL20(1)   <---------AHL20(2) <-----------GT1--------->ANAC46<---------ANAC58        <---------ANAC58 >>>>>WRKY18 --------->AHL20(2)<-----------GT1 <----------ID1  <---------ANAC58        <---------ANAC46   gacaggtaattgttttttaatacagctttaattttatcttttctgaaatacgaaaagtccattttgcgtttgttgtttgtggttaagaggcgtggtaatt  7189800        --------->DAG2    --------->YAB1                                                                              ----- ---------MYB52(1)                                                                              ----- ------->LBD16                                                                                ------- -------ANAC55(2)                                                                        ------>MYB83 ------>ANAC55(2)                                                                        ------>MYB46(1) -------ANAC46            --------->YAB1                                              --------->At4g35610 -------ANAC58          <---------TOE2(3)       --------->AHL20(2)                   --------->ARR14(2) -------ANAC58        --------->AHL20(2)   <<<<<<<GRF7                               <---------ARR14(2) ------------->AGL1  --------->AHL20(2)----------->RAV1(2)                          <------ZmHOX2a(1) >GT1  ---------->DOF2<---------AHL20(2) ----------->HVH21     ----------->GT1  ---------->DOF2------   ccgtaattgtaaagtagtccaaaattaatgaaaattagcaaacctgacaatgaaatgtattggaattgcaaaaaatgacttaaaaaggacctgccaaaaa  7189900                              <---------ARR11(3)                              --------->ARR11(3)     <---------AHL20(2)      <---------CCA1(2)    <---------AHL20(1)     --------->AHL20(2)    --------->AHL20(1)    <---------YAB1  --------->AHL20(1)    <---------ICU4  <---------AHL20(1)    <--------HAHB4                         ----------->GT1  <---------ARR11(3)    --------->YAB1                         <---------YAB1 ---->ANAC58           <---------YAB1                       --------->ICU4           ----------->GT1 ---->ANAC58           --------->ICU4--------->ZAT6       --------->YAB1            <---------WOX13(1) --->DOF2            <---------bZIP60(1)         ----------->GT1             --------->DAG2        <- --->DAG2            --------->bZIP60(1)        <---------TOE1(2)           ---------->DOF2   <------   gcaatatatatttaagagtaatggcatcattatatctttccactagtttgcaggttataagcataatgaaaaaaaaaaaaaagtagattgaaaattatgt  7190000                    <---------AHL20(2)         --------->TOE1(3)         --------->TOE2(3)        <---------ANAC55(2)   --------->bZIP60(2)   --------->O2<---------ATHB12   <---------bZIP60(1)                                                                    -----------   --------->bZIP60(1)      --------->ATHB12                                      --------->CCA1(2) <-----------GT1    --------->AHL20(2)                   --------->ANAC55(2)     <---------AHL20(1) ----------HVH21   --------->AHL20(2)  ----------->GT1   <---------ANAC55(2)     --------->AHL20(1) ---YAB1----------->GT1 <---------AHL20(2)    --------->ARR11(3) <----------DOF2--------->AHL20(2)   ttgtcacatcacgttaaatcatttatttattcatttggaattagttaaaatcatgtgttacataatactttatagcttagaaatatataagttggaaaat  7190100  Previous    Next  AGI:  At5g21140.1    Description:  EMB1379 (EMBRYO DEFECTIVE 1379). similar to unnamed protein product [Vitis vinifera] (GB:CAO67365.1); contains InterPro domain Zinc finger, RING-like (InterPro:IPR014857); contains InterPro domain Nse1 non-SMC component of SMC5-6 complex (InterPro:IPR011513) Range:  from: 7187099    to: 7189622    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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