Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                               <---------AHL20(2)           ---------                                                 <----------DOF2                        <---------AHL20(2)                                         --------->ARR11(3)    --------->AHL20(2)       --------->AHL20(2)           <---------YAB1                <---------ARR11(3) --------->AHL20(1)       --------->WOX13(1)       --------->O2                      <-----------GT1    <---------AHL20(1)     <<<<<<<<<<WRKY26       <---------O2                  --------->WOX13(1)    --------->AHL20(2)      <<<<<<<<<<WRKY38 --------->DOF2          <----------DOF2--------->YAB1   --------->AHL20(2)        <<<<<<<<<<WRKY43   gtgaaagacacttgtcattgtcagtttctttcttctggtcaattatcttctctttttaaaaatatataaatacagtttttttttggtcaattaaacacaa  7167800                                                                                         --------->At5g28300                                                                                        ----------->GT1                                                                                      --------->ZAT14                                                                                      --------->At4g35610                                                                                  --------->MYB52(1)                                                                               <---------ICU4                                                                               --------->YAB1      <----------DOF2                              --------->AHL20(2)         <---------ATHB12 <---------ARR11(3)                               --------->AHL20(2)          <---------ATHB51 --------->ARR11(3)  <---------AHL20(2)       <---------AHL20(2)              --------->ICU4 ------>YAB1        --------->AHL20(2)        --------->AHL20(1)      --------->YAB1  <---------ZAT14 >ANAC46         --------->AHL20(2)           --------->AHL20(2)     <---------YAB1  ------->GAMYB   taagaactctttgtttcatatatataatatcagtaactctttggaaaataaaataaaaaataagaagcattttcatagcaataataacagcagtgaatta  7167900                                                                                                -----                                                                               --------->ANAC58------                                                                               --------->ANAC58------                                                                              --------->ZAT18  ------                                                                              ------->TEIL     ------                                                                          ------->TEIL         ------                                                 --------->ATHB12    --------->O2              ------                                                <---------YAB1     ----------->RAV1(1)    <---------YAB1                                   --------->TOE2(3)            --------->ANAC58         --------->AHL20(2)                                  --------->REM1(1)             --------->ANAC58         <---------AHL20(2)                                 <-------TEIL <---------AtLEC2---------->DOF2 <---------ZAT18  <-----   acacatacaatttcatggagactataagtaagagctacattattttgtgcatgatagaaatttagaaagccacatgaatgtacgctcgtatttttatacg  7168000                                         <-----------GT1         ------>ZmHOX2a(2)            <--------ATHB1    <---------WOX13(1)                --------->ATHB51  <---------ICU4                      <---------ICU4  --------->ATHB51                    --------->YAB1  <--------ATHB1                      <--------HAHB4                                       ------>ZmHOX2a(2)  -------->HAHB4                     --------->ICU4                                      <---------ARR11(3)  --------->ATHB12                   --------->AHL20(2)                                  --------->ARR11(3) --------->AHL20(2)         <---------ANAC58                                             --------->ARR14(2) <---------AHL20(2)         <---------ANAC55(2)                                          <---------ARR14(2) <---------ATHB51           --------->ANAC55(2)                <---------ARR14(2)    --------->LBD16 ---->TOE2(3)           --------->HSFB2a(1)                    --------->ARR14(2)   --------->DEAR3(1) --->ANAC58  <---------YAB1 <---------ANAC46                --------->ANAC58        --------->O2 --->ANAC55(1)          <---------HSFB2a(1)              --------->TOE2(2)         --------->ATERF1(1) ----->GT1--------->TOE1(2) <---------ANAC58             --------->TOE1(2) --------->AHL20(1) --->ANAC46 <---------TOE2(2)        <---------ATHB12   --------->YAB1     --------->ARR11(3) --->ANAC55(2)          <---------HSFC1(2)   <---------ZAT14--------->ANAC58       <------NtERF2 --->ANAC58 <---------TOE1(2)        <---------ATHB51--------->WOX13(1)   --------->AHL20(2)        < ----ANAC55(2)          --------->HSFC1(2)   --------->ZAT14--------->ANAC46     --------->PCF5------   taaataattgatcgtatgattttcgaaatttcgtattcaataattactccagtgtccatcatacgaaactgccaaaatatatggccccgtcgatcttgtc  7168100                                                  --------->ANAC46                                                  --------->ANAC58                                                <---------ALFIN1                                               --------->ZAT14                                              --------->AtMYB61                                              <---------ALFIN1                                             --------->ANAC46                                           --------->ANAC46            <---------MYB52(1)            --------->MYB46(3)          <---------ANAC58              <---------ARR14(2)                            <---------DAG2     <----------DOF2                    --------->ARR14(2)                            *TSS       <--- ----------DOF2    --------->ICU4    --------->YAB1 --------->ANAC46         ------------>CBF    <--- ---->ID1 <---------ANAC58      --------->MYB46(3)--------->ANAC58------->TEIL        <----------DOF2   gtcttttctttttcgtttgtaatgtttaagttcaaccactaatatccaccacacacaaaataaaactgcatcttagagaaacaatccacttttgttttta  7168200                                                                             --------->ANAC46                                                                             --------->ANAC58                                                                         --------->YAB1         -----                                                                     <---------ICU4       --------->AHL20(2)                                                                    <---------YAB1    ---------->DOF2                                                                    --------->ICU4--------->ANAC46     <---------DAG2                                               --------->YAB1  --------->ANAC58 <-------TEIL                                                     <---------ICU4  --------->AtLEC2 ------TOE1(3)                                                   <---------YAB1   --------->ANAC58 ------TOE2(3)            ---------->DOF2  --------->ANAC46    --------->YAB1--------->ANAC58  ------   aggttcaatttttgaaattttcaaaaaacaaagcctatttcatacactcaccagtgcttcacaattcatcataattcataagccacgcaaaagaaaataa  7168300                                                                         <------NtERF2                                                                        <---------RAP2.3(1)                                                                        ----------->RAV1(1)                                                                        ------>NtERF2                                                                        <---------ERF1                                                                       <---------DEAR3(1)                                                                       --------->ATERF1(2)                                                                       <---------ATERF1(2)                                                                       <---------RAP2.3(2)                                                                       <---------RAP2.6(2)                                                                      <---------At4g35610                                                                      --------->At4g35610                                                                      <---------LBD16                                                                      --------->ATERF1(1)                                                                      <------NtERF2                                                                     <---------ORA47(2)                                                                     <---------DEAR3(2)                                                                     <---------ERF1                                                                     <---------RAP2.3(1)                                                                    <---------At1g77200                                                                    <---------DREB2C(2)                                                     <---------ANAC46------>NtERF2                            <---------ANAC46         <---------ANAC58<---------ATERF1(1)                            <---------RAP2.6(2)      <---------ANAC58<---------RRTF1(1)                          <---------ANAC46        <---------DEAR3(1)<---------DEAR4(1)                          <---------bZIP60(2)  <---------AtMYB61    <---------DEAR3(1)           <---                          <---------MYB46(3)   --------->ALFIN1     <---------RAP2.3(3)         <----                         --------->ALFIN1    <---------MYB46(3)    <------NtERF2                <----                         <---------AtMYB61--------->MYB55(2)       --------->ATERF1(1)          <----                       <-----------RAV1(1)--------->MYB52(2)      <---------SPL7               <-----                <------NtERF2<---------MYB46(3)<-----------RAV1(1)------>NtERF2             <xxxxxxxx                --------->At5g28300 --------->MYB52(1)            <-----------HVH21        --------->ALFIN1      --------->GLK1(2)<---------ANAC58   <---------MYB46(3)      <---------ATERF1(1)     ------->MYC3    <---------HSFB2a(1)<---------ANAC46  <---------AtMYB61       <---------DEAR3(1)       --------->TOE1(2)    --------->HSFB2a(1)<---------ANAC58  --------->ALFIN1       <------NtERF2             <-------MYC3 ---->DAG2    <---------ANAC46<------NtERF2<-------GAMYB      <---------DEAR3(1)         <---------O2 ---->DOF2   --------->RAP2.6(3)  <---------MYB52(2)<------NtERF2--------->DEAR3(1)      --------->O2   agtgaaagattccatggcggtaattgtgtggtggctactaacggtggttgtggtggcgtttcactcggcgtcggcggcagtagtagaatcaacgtgggag  7168400                                                                                            ---------                                                                                           <------NtERF2                                                                                        <---------LBD16                                                                                        <------NtERF2                           ---------->DOF2                                              --------->ATERF1(1) <---------ANAC46       ----------->GT1                                              --------->ATERF1(1) ----GAMYB            --------->ARR14(2)                         --------->LBD16    <-----------HVH21 -----MYB46(3)     xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)------->GAMYB   <---------WRKY12<---------DEAR3(1) --MYB46(1)       <---------LBD16                    --------->MYB46(3)         --------->ANAC46   -- --MYB83         <------NtERF2                     --------->MYB52(1) <---------WRKY38(1) --------->LBD16 ----AtMYB61<-----------RAV1(1)         <---------MYB52(1)      --------->HSFB2a(2) <---------ATERF1(1) xxxxxxxxsmallRNA(s)<------NtERF2     --------->YAB1--------->At4g35610--------->MYB52(1)--------->DEAR3(1)   gttgagtataagtactggtggccggattgtaaagaaggaatcgttatggccatcaacggccagtttccagggccaacgatagacgcagtcgccggagaca  7168500                                                                   ----------->GT1                                                                 <-----------RAV1(2)                                                                <---------MYB52(1)                                                                --------->TGA2(2)                    ------->GAMYB                              <-----------TGA1          --------->O2                                        --------->TGA1a          ======================MYC_MYB                       --------->ANAC58          <---------O2                                        --------->ANAC58          --------->bZIP60(2)                                 --------->ANAC55(1)          <---------TGA1a      --------->DEAR3(1)             --------->ANAC46          --------->ANAC46    --------->ANAC46               --------->SPL7          ==================MYC_MYB                    --------->ANAC46   --------->ICU4  <------------MYB.PH3(2)             --------->bZIP60(2)   <---------YAB1  <---------MYB52(2)                  --------->ANAC58 -->HVH21 --------->TGA1a   <---------ALFIN1   --------->ATHB12<-----------HVH21 ------->At5g28300 --------->MYB46(3)--------->ALFIN1  --------->ANAC58   cggtcattatccacgtcgtcaacaaactctccaccgaaggtgttgttatccattggcacggcatacgtcaggttattcaataaactctaaatttcttcct  7168600                        ----------->HVH21                      ----------->GT1                    ----------->HVH21                         <-                 --------->ANAC55(2)     ------->GAMYB ----------->GT1                       <-------                 <---------ANAC55(2)    <---------MYB52(2)                                  >>>>>>>>>ARR2       --------->AHL20(2)               --------->MYB46(3)                                 --------->ATHB12   tctatacaaaaatataagtatgtaatgtgacaagaagcatcaacaaacaaacaaaaaatgtgacaatgagcttattctatacaactatatgtttgattgt  7168700  Previous    Next  AGI:  At5g21100.1    Description:  L-ascorbate oxidase, putative. similar to L-ascorbate oxidase/ copper ion binding [Arabidopsis thaliana] (TAIR:AT5G21105.1); similar to ascorbate oxidase [Brassica juncea] (GB:AAF20933.1); similar to ascorbate oxidase [Brassica juncea] (GB:AAF20931.1); similar to ascorbate oxidase [Brassica juncea] (GB:AAF20932.1); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Cupredoxin (InterPro:IPR008972); contains InterPro domain Multicopper oxidase, type 2; (InterPro:IPR011706); contains InterPro domain Multicopper oxidase, type 1; (InterPro:IPR001117); contains InterPro domain Multicopper oxidase, c Range:  from: 7168186    to: 7170930    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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