Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <---------YAB1                ------>ZmHOX2a(2)                ====================================HOX2a_HOX2a                                    --  --------->ALFIN1      <---------At5g28300                                                        --  <-----------RAV1(1)  <-----------GT1                                                         <----- -ANAC46       <------ZmHOX2a(2)             ------>ZmHOX2a(1)                             <---------AHL20(2) -ANAC58       =====================================HOX2a_HOX2a                            --------->AHL20(2) -bZIP60(2)   <---------ARR14(2)     <---------ANAC58                                    <---------AHL20(2) -ANAC58      --------->ARR14(2)     <---------ANAC58  --------->YAB1                    --------->AHL20(2)   tgatgtgttggacttggatccccatttaccattctaattccttgctcctaaaactaatagtattgtttttatgtcaactctctaaaactatatatatata  7155800                                                                          <-----------GT1           <                                                                       <---------ICU4              --                                                                     <---------YAB1                <-                                                                  <---------MYB52(1)               --         ------>MYB83                                            --------->TOE2(3)          <--------         ------>MYB46(1)                     ----------->GT1    ----------->GT1           <---------WRKY18(1)       <---------MYB59         --------->YAB1--------->YAB1<---------AHL20(2)            --------->WRKY12       <---------MYB46(2)     <-----------------AGL1      --------->AHL20(2)            <---------WOX13(1) ------->YAB1                 <-----------------AG        <---------AHL20(1)          <---------MYB46(3) --------->GT1     --------->GLK1(2)  ----------->GT1     --------->AHL20(1)         --------->ALFIN1 ----AHL20(2)  --------->AHL20(2)    ----------->GT1      <---------AHL20(2)    ------>ZmHOX2a(1)  <-   atggtaataccaaacaaaaaaattctgaaactttcaaaattggaaaattgtaatttcaaatttatttcgttaatattgactcctcaagtggttgacttgg  7155900                                            --------->YAB1                                            <---------ICU4                                            --------->ATHB51                                            <--------ATHB1                                           --------->ICU4 ----------DOF2                       --------->ANAC58                                           <--- ------->HSFC1(2)                     --------->ANAC58   --------->ATHB12                        ---- --------HSFC1(2)                --------->DAG2       <------MYB46(1)                      <--------- ------->HSFB2a(1)               <---------TOE2(3)    <------MYB83 <---------MYB52(1)      ------>ZmHOX2a(1) -ANAC46 <-------TEIL        --------->YAB1<---------ATHB51    <---------ZAT18      <-----------GT1 --------HSFB2a(1)          --------->AHL20(2)       --------->MYB59        ------>NtERF2 <----------   aactttccaagtacattgggcccaagtcgattaataaggcaaacaataatgggattaggtcattgggcccttagcctcggccatttatacatcctaatac  7156000                                                                                                -----                                                                                               <-----                                                                                              <------                                                                                             <------ZmHOX2a(2)                                                                                             --------                                     <---------DEAR3(2)                                      --------                                     <------MYB46(1)                                        <--------                                    --------->MYB59                                         ---------                                <------MYB46(1)                                             ---------                                <---------DEAR3(2)                                          ---------                           <------MYB83                                                     <--------                           <------MYB46(1)                                                  ---------                           --------->MYB55(2)                                               ---------                           <---------DEAR3(2)                                               <--------                       <-----------RAV1(1)                           --------->ANAC46     -----------                       <---------MYB46(3)                            --------->ANAC58 --------->TOE1(3)                   <---------AHL20(2)<------MYB83                    --------->ANAC58 --------->TOE2(3) ------HSFB2a(2)--------->MYB52(2)<---------MYB52(1)         --------->AHL20(2)     ================= ----->HSFB2a(2)----------->GT1--------->MYB59               <---------AHL20(2)     -------->P------>ZmHOX2a(2) ------AGL15  <--------P   <---------MYB46(3)          --------->AHL20(2)          --------->MYB52(1) -------AGL2  <---------MYB52(1)<------MYB83           <---------AHL20(2)        <---------MYB52(2)   tggaagaaaaaactgggttagttatttgttggttcggttcggttcgatcgatttcatttaaaattaaaaacccgctagaagaaactaacctcaagatccg  7156100        <---------MYB52(1)      --------->O2      --------->bZIP60(2)      --------->TGA1a      --------->ANAC58      --------->ANAC58                                                                ------>ZmHOX2a(2)  <---------WRKY18(1)                                                                <------ZmHOX2a(2)  <-----------GT1                                                                   <---------ARR11(3) ----------->HVH21                                                                  --------->ARR11(3) ---->LBD16                                                                         <---------ARR14(2) ----ANAC46                                                                         --------->ARR14(2) ---LBD16                                                                           <-----------ARR10 ->CCA1(2)                                                                          <---------AGP1 ->ARR14(1)                                                                         --------->AGP1 -ARR14(2)                                                                         <---------CCA1(2) >ARR14(2)                                                                  <---------ARR14(2) >AGP1--------->ANAC46                                                      --------->ARR14(2)     -- >ARR14(3)                                                              ====================HOX2a_HOX2a -ARR14(3)                                                              ------>ZmHOX2a(1)   --------- >ARR11(3)                         --------->ZAT14                      =====================HOX2a_HOX2a >ARR11(1)  <---------GLK1(2)      --------->ZAT18                     --------->TOE2(3)  <---------YAB1 -ARR11(3) <---------At4g35610     <---------ZAT14             <<<<<<<<<TBF1<---------GLK1(2)      -- >ARR10<-----------HVH21   --------->LBD16       <-----------GT1  <<<<<<<<<TBF1--------->TOE2(3)   <- ===============MYC_MYB  <---------LBD16--------->ATHB12    <<<<<<<<<TBF1  *TSS--------->TOE1(2)   <-   ggtttgacccgtcagattatccgattacccggtcttgttcactgatttgattcacaagtttcttcttcttcttcctcagaacctcagatcttattcttag  7156200                                                                             --------->ARR14(2)                --------->HSFB2a(2)                                          <---------ARR14(2)                --------->LBD16                                       <---------HSFC1(2)            <                <---------HSFB2a(2)                               --------->LBD16                  --           --------->GLK1(1)                                    <---------LBD16                    <- ------->HSFC1(2)                                    <---------AHL20(2)      --------->AGP1      ---- >TOE2(3)  <---------GLK1(1)                        <---------AHL20(1)--------->HSFC1(2)        <---- ------->HSFB2a(1)           ----------->GT1       <---------CCA1(2)--------->ARR14(2)          <---- --------HSFC1(2)       <-------TEIL   <---------At4g35610 <---------At4g35610<------ZmHOX2a(2) <---- --------HSFB2a(1)     --------->CCA1(2)        <-------TEIL   --------->MYB52(1)              <-----   aagtttccccatgaaatccgagaagattcaaatgtaaattcagcctccgattcatatattttgctcaccggaaacttcagatcgagctactgcaatttgc  7156300                                                                                           <---------LBD16                                                                                         ------>ZmHOX2a(2)                                                                                  <---------ETT(2)                                                                              ------>ZmHOX2a(2)                                                                            --------->ARR11(3)                                                                            --------->GLK1(2)                                                                            <-----------ARR10                                                                            <---------ARR11(3)                                                                            --------->ARR14(2)                                                                            <---------ARR14(2)  -----                                                                            <---------AGP1 --------->At4g35610                                                                           <------ZmHOX2a(1) --------                                                                           =====================HOX2a_HOX2a      <XXXXXXXXXXXXXXXXXXXMIR156H                                          ====================HOX2a_HOX2a ------>ZmHOX2a(2)                                                    <---------ANAC46   ============ ------ZmHOX2a(2)                                                     <---------DEAR3(1) <---------DEAR3(1) ------->ARR14(2)                                                    <---------LBD16    ============= --------ARR14(2)            --------->At5g28300                   --------->ANAC46     <------ZmHOX2a(2) ----->LBD16              <---------At5g28300                     <---------At5g28300  <---------ARR14(2) -----ANAC46              <---------LBD16         >>>>>>>>>TBF1   <---------LBD16 --------->ETT(2) -----ANAC58             --------->MYB52(1)--------->LBD16     <-----------HVH21<-----------HVH21 -----ANAC58             <-----------GT1 <---------LBD16      <----------DOF2<------ZmHOX2a(2)<------NtERF2 ----LBD16       <----------DOF2        <---------LBD16 ----------->GT1 <------NtERF2  --------->ARR14(2)   ggatcgtgtttttttttttctttcaattcacggtgtatttatctcgggagaagaagaatggatactttcacggcggaggatctgtcgacgatcggcggaa  7156400                                                                       --------->ARR14(2)                                                                       <---------ARR14(2)                                                                   --------->ZAT18                                                                   --------->At4g35610                                                                 --------->ZAT18                                                                --------->ALFIN1                  <--                                                               <---------SPL7                     <--                                                               <-------PIF5                      ----                                                               ------->PIF5                      ----                                                              ==============================bZIP_DOF                                                              <---------ANAC58              ---------                                                              <---------ANAC58            --------->ZAT6                                                              <---------TGA1a            <---------ZAT14                                                              --------->TGA1a            --------->ZAT14 ----------->RAV1(1)      --------->KAN4(2)   <----------DOF2------------>OsbHLH66   <---------HSFC1(1) ----->DOF2    ------>ZmHOX2a(1)              ==========================bZIP_DOF     --------->HSFB2a(2) ->LBD16       <-----------HVH21             <---------DAG2----------->HVH21         --------->HSFC1(1) =====================HOX2a_HOX2a--------->ANAC58          <---------SPL7            <---------HSFB2a(2) =====================HOX2a_HOX2a--------->ANAC58       <-----------HVH21        <----------DOF2-----   tagcgacagtatcgctccttcactcgtttattccgacgcattggctacctttctccatcgtcggacgtgcgcagaaatggacgctttcgagaacactcct  7156500                                   --------->AHL20(1)                            ------>MYB46(1)     <------MYB83                  --------->ARR11(3)                          <---------MYB59     <------MYB46(1)               <---------ARR11(3)                         <---------ANAC55(2) ---------TGA1                     <---------AHL20(1)                <------NtERF2 ---------HVH21--------->TOE2(3)  <---------CCA1(2)                 ------>NtERF2------>MYB83 ----->ANAC46  --------->TOE1(3)--------------->AGL15              <---------ANAC58 ----->bZIP60(2)   <---------CCA1(2)      <---------GLK1(1)        <---------ANAC46            <----- >ANAC46       --------->YAB1   ------>ZmHOX2a(1)                  <---------ANAC58            <----- ->ZmHOX2a(1) <---------ATHB12  <---------------AGL15      <----------DOF2    --------->ANAC55(2)   cgtcagtaggtttccaatcttaaatctctgattcctatatattgaattctgaattttctgactttgatggcgcgtttgatacctatccattgttctgctt  7156600              <---------ICU4             --------->ATHB12              -------->HAHB4            <---------YAB1                  <---------YAB1             <---------YAB1           <----------DOF2                 --------->YAB1   --------->At4g35610             --------->ICU4     <---------ZAT18             --------->ATHB12           <---------At4g35610           --------->YAB1       --------->ZAT18            <---------AHL20(2)<---------ICU4 <--------     ------->TEIL          <---------ANAC46               <---------ARR11(3) --------->ATHB12 ----DAG2 <---------ATHB12 <---------ANAC58         <<<<<<<ZML2       <---------ICU4  <-----------RAV1(1) -----DOF2<---------ATHB51 <---------ANAC58<---------WOX13(1)        --------->ICU4 <---------At4g35610   tttgatgaatcaataataatcgaagcattgtgtgtgcattctttgattgagctagaactagataattgggaattatgaatgatttcaactgctgctttaa  7156700  Previous    Next  AGI:  At5g21070.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO67366.1) Range:  from: 7156175    to: 7157777    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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