Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      <---------At4g35610                  <---------ZAT18        --------->YAB1               <-----------GT1     <---------GLK1(1)  --------->ANAC58   <------ZmHOX2a(1)--------->At4g35610 <---------DAG2 ->CCA1(2)        --------->ZAT18 ------->TEIL -ARR14(2) <---------ICU4         <---------ARR14(2)                      <---------HSFB2a(2) >ARR14(2) --------->ATHB51       --------->ARR14(2)              <-----------GT1                   < >GT1--------->GLK1(1)  --------->ANAC58--------->TOE2(3)       <---------AHL20(2)                <--   agtgaggaattcataatttgtgagctaagctagacgaatttgccttattcccattacttccaacattttatcaactcgagaaaaacctagatgatggtga  7152500                                  --------->YAB1                                --------->ANAC58                                --------->ANAC46                          ------>ZmHOX2a(1)                         --------------->AGL15                                      <-------TEIL          <---------At4g35610   --------->ANAC58                                 <------ZmHOX2a(1)          --------->At4g35610<---------REM1(2)                     <---------------AGL15 --------->YAB1          ==========================================================MADS_MADS        - ---------YAB1         <-----------GT1                             --------------->AGL15 <---------ICU4 ----ZmHOX2a(1)       <-----------GT1----------->GT1              ----------------->AGL3 --------->YAB1   ggatgataatgcagatgaagaaattttcctctacaagcatggcaaaatcgaagtaagacgattcagaaaccacatttagtataggattcattcattactg  7152600                                                                                                   <-                                                                                                   --                                                                                                  ---                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                   ------>ZmHOX2a(2)             <---                                                                  <------ZmHOX2a(2)              <---                                                           --------->REM1(2)                     <---                                                          ----------->HVH21                      <---                                                          --------->ALFIN1        --------->ALFIN1---                                                        <---------ANAC46   --------->CCA1(2)    -----                                 ---------->DOF2        <---------ANAC58--------->ANAC58        -----                              <------ZmHOX2a(1)         <---------ANAC58--------->ANAC58        <----                    --------->ANAC46         <------ZmHOX2a(1)   --------->ARR14(2)            <-----                    --------->ANAC58         ============================HOX2a_HOX2a          ------- -------->GLK1(1)   --------->ANAC58         =============================HOX2a_HOX2a         <------   agaaatcgagcaatggagacacaagtaagtgaggagaaagagagtaaggaccattttggcgtgaagcgatcggcaagagacgatgtgttgaagaaggtgg  7152700           <---------At4g35610           --------->At4g35610        ------>NtERF2        <---------ATERF1(1)       --------->DEAR3(1)    --------->ANAC58    --------->ANAC58    <---------ALFIN1    --------->ANAC46               ==================HOX2a_HOX2a  <---------ATERF1(1)              ------>ZmHOX2a(2) <---------WRKY38(1)               ======================HOX2a_HOX2a <---------WRKY12                 --------->HSFB2a(1) -----NtERF2                      <------ZmHOX2a(2) ---->NtERF2                      =======================HOX2a_HOX2a --->NtERF2--------->LBD16        ===================HOX2a_HOX2a ------ANAC46                     <---------HSFB2a(1) ----->ATERF1(2)                 --------->ARR11(3) ------RAP2.6(2)                 <---------ARR14(2) ------ATERF1(2)                 --------->ARR14(3) ------DEAR3(1)                  <---------ARR11(3) ------ANAC58                 --------->LBD16 ------ANAC58 ------>NtERF2  <---------LBD16                                       <---------HSFB2a(2) ------>RAP2.6(2)           <---------LBD16                                        --------->HSFB2a(2) ---->RAP2.6(3)          <---------ABI4(2)                            <---------MYB52(1) ---->ATERF1(1)         --------->ANAC58                            <---------ANAC58 --NtERF2<---------LBD16--------->ANAC58          ------>ZmHOX2a(1) <---------ANAC58 --------->REM1(1) ----ATERF1(1)<---------At4g35610<---------ARR14(3)                <XXXXXXXXXXXXXXXXXXXXMIR1886.1 -->ALFIN1--------->ANAC46 --------->MYB52(1) ------>ZmHOX2a(1)<------------------------ANAC81  <---- ---DEAR3(1) --------->DEAR3(1)  --------->ARR14(2)       <<<<<<<<<TBF1    ---------->ID1       -----   cggccaacgcctccgcagcccatgagaagcaccgggatcttcttcatccttcctctcttcttcttcgatttcgttttgtttttttctacaactactagtc  7152800                                                                <---------ANAC58               ------                                          ---------->DOF2       <---------ANAC58            <--------                                       --------->ANAC58         >>>>>>>>CAMTA3         <---------ANAC58    --------->LBD16                    --------->ANAC58         <---------ANAC46       <---------ANAC46   <---------ANAC46                <---------At4g35610     --------->ARR14(2)        --------->ARR14(2)   <---------ANAC58                <---------ZAT2          <---------ARR14(2)        <---------ARR14(2)   <---------ANAC58          <-----------HVH21          <---------ANAC46          <---------ANAC58 <---------At5g28300        <-----------RAV1(1)  --------->MYB52(1)               <---------ANAC58 -----ZAT18       <---------ZAT14  --------->At4g35610  <---------HSFB2a(2)   <-----------RAV1(2) ---->ZAT18       --------->ZAT14  --------->ZAT2<---------ALFIN1 *TSS  --------->YAB1 <---------ANAC58   tactaccgtggttttcttcgttcactgaaaatgtcgcagctaagcaaagcccaacgtttcggaaacgcgtgtaatcgtagccaggcgtttcgggtgtcaa  7152900                   --------->LBD16                   ------------>CBF                  --------->ANAC58                  --------->ANAC55(2)                  --------->ANAC46                               <---------ANAC58                  --------->ANAC58                               <---------ANAC58                 <---------LBD16                             <---------YAB1          <------MYB83                                     <--------HAHB4        <---------WOX13(1)        --------->ANAC58         <XXXXXXXXXXXXXXXXXXXXMIR868 --------->YAB1       <------------CBF --------->AHL20(2)                <---------YAB1              <---------YAB1 ---->DOF2<---------MYB46(3)      --------->ANAC58      <---------ZAT6         --------->YAB1<------- ---HVH21 <------MYB46(1)         --------->ANAC46     <---------YAB1 --------->YAB1<----------DOF2   aggctactagattggttcttccgcaattacttacaaacgctatatttgcatacgattagtattattagcgtttgataacaattatactttgataacaatt  7153000                                                                                          --------->ATHB12                                                                                    --------->AHL20(2)                                                                                    <---------AHL20(2)                                                                                --------->ICU4                                                                                --------->AHL20(2)                     <-----------GT1                                            <---------ATHB51                --------->TOE2(3)              <---------At4g35610              <---------AHL20(2)               ----------->GT1          --------->AHL20(2)                     <---------AHL20(1)              <---------TOE2(3)         <---------AHL20(2)                  --------->AHL20(2)              <---------TOE1(3)         --------->AHL20(1)                 <---------AHL20(2)              ---------->ID1      ----------->GT1                         --------->AHL20(2)             <-----------GT1   --------->MYB52(1)   --------->GLK1(1) --------->AHL20(2)<<<<<<<<<<<<<        <---------DAG2    ----------->RAV1(1)  --------->At4g35610 --------->YAB1<---------ICU4    <- --ICU4 <----------DOF2--------->ZAT6  --------->AHL20(2)         <-------TEIL--------->YAB1       --   acacaaatcgctttttatcgttataacacaacaaaaccgaaaaaaattgagatgaattccaactaaaattcataaatttaaaataattaaaaacattgga  7153100                                                                                                 <---                                                                                                 ----                                                                                                -----                                                                                                xxxxx                                                                                                xxxxx                                                                                               <-----                                                                                            <--------                                                                                           <xxxxxxxxx                                                                                         xxxxxxxxxxxx                                                                                         xxxxxxxxxxxx                                                                                         xxxxxxxxxxxx                                                                                         <xxxxxxxxxxx                                                                                         xxxxxxxxxxxx                                                                                        <xxxxxxxxxxxx                                                                                        <xxxxxxxxxxxx                                                                                       <---------ARR11(3)                                        ------->TEIL                                   <---------GLK1(2)                                        <-----------GT1                               <xxxxxxxxxxxxxx   <---------AHL20(2)               <---------TOE2(3)                                 xxxxxxxxxxxxxxx  <---------AHL20(1)              <---------AHL20(2)                                  xxxxxxxxxxxxxxx  --------->AHL20(1)          <---------YAB1                                          xxxxxxxxxxxxxxx <<<<LFY                      <---------AHL20(2)                                   xxxxxxxxxxxxxxxxxx --------AHL20(2)           --------->YAB1                                       --------->ZAT6------ ------->AHL20(2)   ------>ZmHOX2a(1)--------->ANAC55(2)           ----------->GT1 <xxxxxxxxxxxxxxxxx   attatatattttgcaagttttcctagttatttataatttatgtaactatgtaagtgtttattcactaatgggataatatactaatactagattttaaccc  7153200          ----------->HVH21       <---------LBD16  <---------ZAT14  --------->ZAT14  xxxxxxxxxxxxxxxx>smallRNA(s) ------LBD16 ----->LBD16 ---->ANAC46 xxxxxxxxxxx>smallRNA(s) xxxxxxxxxxx>smallRNA(i) ----LBD16<---------SPL7 ---GT1--------->LBD16 xxxxxxxxxxxxxsmallRNA(si3) xxxxxxxx>smallRNA(se3)                                               --------->AHL20(2) xxxxxxxxx>smallRNA(si3)                                             <---------AHL20(1) xxxx>smallRNA(i)                                                    <---------AHL20(2) xxxxxsmallRNA(s) <---------AHL20(2)                                 --------->AHL20(1) xxxx>smallRNA(s)--------->AHL20(2)                               --------->AHL20(2) xxxxxxxxxxsmallRNA(si3)                                      <---------YAB1 xxxxxxxxxxsmallRNA(se3)                                     --------->AHL20(2) xxxxxsmallRNA(le3)                  <---------AHL20(1)    <---------YAB1 xxxxxxxxx>smallRNA(le3)             --------->AHL20(1) --------->AHL20(2)                <---------YAB1 xxxxxxxx>smallRNA(si3)            <---------AHL20(1)   <---------AHL20(1)                <---------AHL20(2) xxxxxxxx>smallRNA(se3)            --------->AHL20(1)   <---------AHL20(2)        <---------At5g28300 xxxxx>smallRNA(fl3)         --------->YAB1             --------->AHL20(1)<---------AHL20(2) ->GAMYB --------->LBD16     ----------->GT1           --------->AHL20(2) --------->AHL20(2) xxxxxsmallRNA(si3)        ---------->DOF2<---------AHL20(2) <---------AHL20(2)  <-----------GT1<----   gcggtataccgcgggacgatttatttttcaaaagtaatatatattaaaacttgcaaattttatttttataaaatatttatattttacagtttataattgt  7153300                 --------->ANAC58                                                      <---------AHL20(2)                 --------->ANAC58                                                   --------->AHL20(1)             <xxxxxxxxxxxxxxxxsmallRNA(s)                        --------->AHL20(2) <---------AHL20(1)        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                     <---------AHL20(2) <---------AHL20(2)       --------->ZAT6             ----------->GT1         --------->TOE2(3)         --------->AHL20(2)     <-----------GT1           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)              --------->YAB1   <--  <---------ANAC55(2)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)--------->YAB1   --------->AHL20(2)  --------->ANAC55(2) <xxxxxxxxxxxxxxxxsmallRNA(i)    <-----------GT1         --------->YAB1   <----- -----YAB1 --------->ZAT14 <xxxxxxxxxxxxxxxxsmallRNA(i)<-----------GT1    ----------->GT1     -------   tattaagtaacactataccacgaattcatgagacaattgttaaaaaactgaagtttttaacctctattaaaacagcatgttaataatattttaaaatttt  7153400  Previous    Next  AGI:  At5g21060.1    Description:  homoserine dehydrogenase family protein. similar to AK-HSDH/AK-HSDH I (ASPARTATE KINASE-HOMOSERINE DEHYDROGENASE I), aspartate kinase/ homoserine dehydrogenase [Arabidopsis thaliana] (TAIR:AT1G31230.1); similar to homoserine dehydrogenase [Glycine max] (GB:AAZ98830.1); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Homoserine dehydrogenase, catalytic; (InterPro:IPR001342) Range:  from: 7148980    to: 7152866    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version