Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                <------                                                                                              <------                                                                                           <---------SPL7                                                                                         <------NtERF2                                            --------->At4g35610                          <---------At4g35610                                            <---------At4g35610                          --------->At4g35610                                            --------->ZAT2                             <---------WRKY12                                            <---------ZAT2                             <---------WRKY38(1)                                           <---------TOE1(2)                         <-----------HVH21                                     ----------------------->TaNAC69(2)       ---------->DOF2--------            ---------->DOF2          <---------SPL7                        --------->AtLEC2<--------- ------------AGL15                  ------>ZmHOX2a(2)           --------->ANAC58--------->ANAC58 -------------AGL1            <----------DOF2                   --------->ANAC58--------->ANAC58 <---   tcaaatcggtattcaaaagaccagactcacttctttgatcgttcgcagcttcaagtctctcttggcactcaaattccatgaaaagccagtcagcgtccga  7146700                                                         --------->ARR11(3)                                                         <---------ARR14(2)                                                         --------->GLK1(2)                                                         <---------ARR11(3)                                                   --------->HSFB2a(2)                                                   <---------HSFB2a(2)                                                  ------>ZmHOX2a(2)                                                 <------ZmHOX2a(2)      ----------->HVH21                         --------->ARR14(3)     --------->LBD16                            <---------ARR14(3)    --------->ANAC55(2)                         <---------AGP1    --------->ANAC58                            <---------ARR11(3)    <---------ANAC55(2)                         --------->ARR11(3)                --------->At4g35610    --------->ANAC46                            <---------ARR14(2)                <---------ZAT2    ----------->GT1                             --------->ARR14(2)                --------->ZAT2    --------->ANAC58                        <-----------------AGL1           --------->GLK1(2) ---TOE1(1)                        --------->MYB46(3)    --------->ARR14(2)  --------->ARR14(2) ---TOE2(1)                    --------->ANAC58<---------ARR14(1)            <---------ARR14(2) ->SPL7                        <---------MYB52(2)--------->GLK1(1)           ------->TEIL --HVH21 --------->ZAT6        --------->ANAC58<---------CCA1(2)  ----------->RAV1(1)           ----- ------REM1(1)           <----------DOF2 ----------->HVH21    --------->ANAC46    <---------At4g35610   tgtagcccgtaacacttaaacaaggagcttttcacgaacgactctgaccggatctcgaaaatctacagcaccagagacgaatccagctaagcttgaagat  7146800                                                                                           --------->YAB1                                                                                        --------->ANAC46                                                                                     ------>MYB46(1)                                                                ---------->DOF2      ------>MYB83                                    --------->AHL20(2)      --------->LBD16         ----------->RAV1(1)                            ------>MYB46(1)                --------->ANAC46        --------->AtMYB61                            ------>MYB83                <---------At5g28300   --------->YAB1                          --------->AtMYB61            <-----------GT1     --------->WOX13(1)     --- ---->CCA1(2)<-------TEIL <---------MYB59           <---------ICU4      --------->YAB1<---------ALFIN1   aaacgagaaaaacgattcatcaatagaaccaaaccagattaaacaaaatacaaatttttacccccaaaaatcgataacaatcagaccaacacatcataaa  7146900                                                                                                    -                                             <------ZmHOX2a(1)                                   ----                                      --------->MYB52(1)                                --------->ANAC46                            <---------At4g35610                                         --------->ANAC58                <-------TEIL--------->At4g35610                                         --------->ANAC58               --------->GLK1(2)   --------->ANAC46    ---------->DOF2           <---------------AGL15            ----------->ARR10      --------->ANAC58 --------->TOE2(3)          ----------->GT1   <--- ------->DOF2 <---------GLK1(2)    --------->ANAC58 --------->YAB1          ---------->DOF2 ---------   caaagaaaaacgaagagattcgtaaatgttagctaaaacgaaacagaggaacaacgataaatccctagaaacagagatgaaagctaaaacaagcaagcgg  7147000                                                                        <---------ANAC55(2)                                                                        <---------ANAC58                                                                      <-----------GT1                                                                   <---------ICU4                                                        --------->ARR11(3)      --------->DAG2                                    <-----------ARR10     ---------->DOF2                                    <---------ARR14(2) <---------HSFB2a(2)                                    <---------ARR11(3) ---------->GT1                             --------->MYB52(1)    --------->ICU4 ----->ARR14(2)                          --------->ANAC46<---------GLK1(1) ------ARR14(2)           --------->YAB1 --------->YAB1 --------->ARR14(2) >MYB52(1)       <----------DOF2  --------->GLK1(2)    <------ZmHOX2a(1)<---------ANAC58         <---   aatcgagaaaagttagtacctttagtaatcaaaaacaatctattcgtaacagagagaggattttcgccaaaattacgttgccctaatttctctaatcgga  7147100                                              --------->YAB1                                             <---------ATHB12                                            --------->ANAC58                                            ------>MYB83                                            <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                            ------>MYB46(1)                                            --------->ANAC58                                          ------->GAMYB                       ------------>CBF                                         --------->MYB46(3)               <------------CBF                                        ------>MYB46(1)                  <---------ICU4      --------->GLK1(2)                 -------->P                       --------->ATHB12     --------->ARR11(3)               --------->AtMYB61                  --------->ATHB51     <---------ARR11(3)        *TSS  --------->MYB46(3) ----------->GT1 <---------YAB1   ----------->ARR10       --------->DAG2<---------ATHB12               --------->ICU4---------->ID1 ------WOX13(1)          ---------->DOF2------>MYB83------------>CBF   --------->TOE2(3)            -   ttgatgagattttgaagatggagaaccaaaaggtccaaaaccaaccaagcatcaaacaatgtaaaaaaaaaaacattattgccaatttgtttttttttta  7147200                                                                    <---------At4g35610                                                                    --------->At4g35610                                                               --------->CCA1(2)                                                            --------->ANAC58                                                            --------->ANAC58                                                           <---------TOE1(2)                                                           --------->SPL7                                                         <---------SPL7--------->At4g35610                              <------ZmHOX2a(2)          --------->TOE2(2)                        <---------SPL7                   --------->TOE1(2)                        <-----------HVH21               ------>ZmHOX2a(2)        <---------DEAR3(1)--------->SPL7               <------ZmHOX2a(2)               --------->ARR11(3)       --------->SPL7  ------->GAMYB                   --------------->AtSPL3          <---------ARR11(3)     --------->LBD16  --------->MYB46(3)               <---------------AtSPL3         <---------CCA1(2)     ----------->HVH21<------------AtMYB77            <---------ARR11(3)         <-------MYC3     <---------SPL7   --------->DEAR3(2)              <---------ARR14(2)         ------->MYC3       -    --------->LBD16  -------->P                       --------->ARR14(2)   --------->REM1(1)    <----   <---------LBD16   <---------At5g28300           --------->HSFB2a(2) <---------At4g35610<----------DOF2   <------NtERF2    <-----------GT1                <---------HSFB2a(2) --------->ZAT2------->TEIL  <- -------->PCF5      --------->MYB52(1)    <---------ATHB12 <---------TOE2(2)----------->RAV1(1) -----   tggtccccggacggtgctatactaaccgtccgatcgaaaaacaaatcaagcgtccagatcgtacgatatgagcagctacaacacatgtatatctttgttt  7147300                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                      <----------DOF2         <---------WOX13(1)                                                ----------->GT1  <--------      <---------TOE2(3)    <---------ANAC46                        --------->ICU4     --------------- <---------AHL20(2)    --------->At4g35610                    <---------ANAC55(2)     <-------------- -------->AHL20(2)     <---------At4g35610                    --------->ANAC55(2)     <---------DAG2 -----AHL20(2)        <-----------RAV1(1)              <---------------AGL15    --------->ARR14(2) --------YAB1   ------>ZmHOX2a(1)                      ============================================== ---->AHL20(2)------>ZmHOX2a(2)        ---------->DOF2 --------------->AGL15    <---------ARR14(2)   tattatataagattgatcctatttttgctgcgttatattctcaaagttttcaaaattccacaataagtgatttttagttgtaaatacgctttttctagta  7147400                   <------ZmHOX2a(2)     --------->ARR11(3)     <---------GLK1(2)                                  ---------->DOF2     <---------ARR11(3)                          ----------->HVH21                             <-----   ----------->ARR10                           <---------ICU4                                  ------ -HSFB2a(2)       <---------ARR11(3)          <---------ATHB12                    <---------ICU4 ------>AGL15     --------->ARR11(3)          --------->MYB46(3)      <---------YAB1          ------- >HSFB2a(2)<---------ANAC46              --------->AtLEC2            --------->KAN4(2)        ------>NtERF2 -------AGL15    <---------GLK1(1)       --------->ANAC58         <---------ANAC58<--------ATHB1 >AGL15    <---------ANAC58              --------->ANAC58 --------->ANAC58       <---------ATHB51 -AGL15    <---------AtLEC2              --------->ANAC46 --------->ANAC58       <---------ATHB12 =MADS_MADS<---------ANAC58   <---------TOE1(2)--------->YAB1     <---------ANAC58--------->YAB1<----   agagtaagattttgcatggagatcatatatcacatgttcttccatgcaaccatgaccttgaagcaatagcttattcttgtccaataatgctattggcgcc  7147500                                                                    <------NtERF2                                                                    ----------->RAV1(2)                                                                   ------>NtERF2                                                                  --------->ATERF1(2)                                                                  <---------ATERF1(2)                                                                  --------->DEAR3(1)                                                                 --------->RAP2.3(1)                                                                 <---------RAP2.6(2)       <----------ID1                                            --------->ATERF1(1)       --------->ZAT18                                      <---------MYB46(3)       <---------ZAT18                   --------->YAB1     ====================RAV     <---------CCA1(2)      --------->ALFIN1           ------>ZmHOX2a(2)          <-----------RAV1(1)    ------->GAMYB -NtERF2   ---------->DOF2      <------ZmHOX2a(2)         <---------ANAC58        --------->MYB46(3) --->ATERF1(1)                 --------->ARR11(3)         <---------ANAC58      --------->MYB52(1) ---->RAV1(1)                  --------->AGP1             <---------ANAC46  --------->GLK1(2) -------RAV1(2)---------->DOF2 <---------ARR11(3)    <---------AtLEC2       <-----------ARR10      <-   agagggaagtggacaaagaaagagtttttgtgagatctatcgaacataatttgttccatggcttgttgccgcctgaagaatctaacgaccatatcacttg  7147600  Previous    Next  AGI:  At5g21040.1    Description:  F-box family protein / WD-40 repeat family protein. Identical to F-box/WD-40 repeat-containing protein At5g21040 [Arabidopsis Thaliana] (GB:Q94AD8); similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT2G43770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67352.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 7144924    to: 7147131    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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