Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             ------>MYB46(1)                                                           ------>MYB83                                                          --------->MYB52(1)                                                          ----------->RAV1(1)       --------->YAB1                                                      <------ZmHOX2a(1)            <---------YAB1                                                     <----------ID1             <------NtERF2         <------NtERF2                          <------ZmHOX2a(1)              ------>NtERF2        ------>NtERF2                        <---------HSFB2a(2)         <---------ANAC58 ----->ZmHOX2a(1)                           =================HOX2a_HOX2a <---------ANAC58 -------->HSFC1(1)                        <---------AGP1 --------->AtMYB61    --------->ETT(2) ---------HSFB2a(2)                       <---------ARR14(2)           --------->GLK1(2) -------->HSFB2a(2)         --------->ZAT14 ------>ZmHOX2a(2)         <---------GLK1(2) --------->ANAC46 ---------HSFC1(1)       ------->GAMYB    --------->ARR14(2)          --------->ARR11(3)--------->ANAC58 -->ARR14(2)          --------->MYB52(1)  --------->ARR11(3)          <---------ARR11(3)--------->ANAC58 ---ARR14(2)          ----------->RAV1(1) <---------ARR11(3) ----------->GT1 ---------->ID1   tcctagaaggcgcggtttcaagaacaacagagaagtctagactggatctaggaagaggaccaacagtataaagattcttgtcgccatcataagcaaaatg  7143900                                           --------->ARR11(3)                                           --------->GLK1(2)             <---------ZAT18             --------->ZAT2      <---------DAG2                          --------->ZAT14             --------->At4g35610 <----------DOF2                         --------->ZAT18     ------->GAMYB        <-------GAMYB   <---------GLK1(2)              <---------ZAT14   --------->ANAC58       --------->At4g35610                        --------->DAG2   --------->ANAC58      <---------MYB46(3)<---------ARR11(3)       ---------->DOF2   tttgcaacccaaatcagcttgacaagtctgttgaactttttcaagaatctttctgccaaaacctttggctaaaagtggactaccatcttcatatgtgata  7144000                                                       --------->AtLEC2                   --------->ANAC58                                                  --------->ANAC58                        --------->ANAC58              <----------ID1                      --------->ANAC58                        --------->ANAC46          ---------->DOF2                  <---------------AGL15                       <---------ZAT18      --------->ARR14(2)      ---------->DOF2  <---------ATHB12                    --------->DAG2      ------->TEIL     <---------ZAT18     --------------->AGL15          ----------->GT1--------->SPL7     <---------CCA1(2) --------->ZAT18    ----------------->AGL1      <------ZmHOX2a(1)--------->ZAT18 <---------ANAC46 ---------->DOF2         ----------------->AG  <------ZmHOX2a(1) ---------->DOF2   gtaacctgtatccaaagagacaaagcacactataaagtatgttttccaaatcaagtcatggaaacaggaacaggaagggaaacaaaaagcgcacgctgta  7144100                                                              --------->HSFB2a(1)                                                              <---------HSFC1(2)                                                              --------->HSFC1(2)                                                             <---------ARR14(2)                                                             --------->ARR14(2)                                                             <-----------ARR10                                                             --------->GLK1(2)                                                     <---------At4g35610                   <------MYB46(1)                   --------->At4g35610                   <------MYB83               <--------P     --------->ARR11(3)                <---------MYB52(1)          <---------MYB46(3)<---------HSFB2a(1)       --------->O2          <---------YAB1                   --------->ALFIN1  <---------ARR11(3)         <---------DEAR3(1)        --------->YAB1                 <---------ZAT14      <---------GLK1(2)     <---------MYB52(1)        <---------ICU4          --------->WRKY12--------->MYB52(2)      ------>ZmHOX2a(1)       <---------ATHB51         --------->WRKY38(1)--------->ZAT18      <----------DOF2<---------LBD16       --------->ICU4<<<<<<<<<MYB2     --------->ZAT14  --------->At4g35610  --------->ARR14(2) -----   atggaagaaattatgactgtttggttttctgaagttgactctgaagtggttagtgagcagaagaatcttctgtcctttggaaccgttgccacggcgagtc  7144200                                                                 --------->ARR14(2)                                                       <-------GAMYB                               --                                                    <------NtERF2<---------ARR14(2)              <---                                                  <---------DEAR3(1)                            <----                                                 <------ZmHOX2a(1)                   <---------ARR11(3)                                         ------->MYC3  <------NtERF2              --------->HSFB2a(2)                                         <-------MYC3<---------DEAR3(1)           <---------HSFB2a(2)                               <---------DOF5.7(2)--------->ALFIN1           ------>NtERF2      <---- ---->ATHB12                  <-------TEIL--------->ALFIN1      <---------CCA1(2) <-----------RAV1(2)   attggaagaagactactcttgctcttcaaaggttcacgttccatgtgttgaggaggcggtagagtcgtatccatttctcggcctccagatgttatgcgtc  7144300                             ------->TEIL                          --------->ANAC55(2)                    <---------ANAC58                           --------------->AGL15              --------->ARR14(2)                               <---------------AGL15            <------MYB83  <---------ANAC58                     --------->TOE1(3)     ------>ZmHOX2a(1)   <---------TOE2(3)                    ----------------->AGL2     <---------MYB52(1)----------->HVH21                 <---------KAN4(2)             --------->ANAC55(2)    --------->TOE2(3)<----------DOF2            --------->LBD16--------->TOE2(3)  <------ZmHOX2a(1)   ------>ZmHOX2a(2)<---------ANAC46           --------->LBD16----------------->AGL3   <---------ANAC55(2) ------->WRKY12     <---------ANAC58   --------->ALFIN1<------ZmHOX2a(1)         --------->ICU4 ----GAMYB --------->MYB59<---------ANAC58    <-----------------AGL1          ---------->DOF2    ---- -----MYB46(3)<---------ARR14(2)     --------->ALFIN1<---------TOE2(3)----------->GT1  <---------YAB1 -----ANAC46<------MYB46(1)<---------SPL7     <------NtERF2<-----------GT1---------->DOF2      <-----   gttgatccttagttcggttctggctttgacgtacctaaggtgtttggccccgaataaggaataacccttaaatagtaaaagaaaggattatgtaagagga  7144400                   --------->ZAT18                   <---------ZAT14                <---------ANAC58               <---------MYB46(3)             --------->At5g28300           <---------DEAR3(1)          --------->ZAT18          <---------ZAT14          <---------ABI4(1)          <---------------------WRI1                                                               --          --------->SPL7                                   <----------ID1                         <--         --------->ALFIN1                                <------ZmHOX2a(1)                        ---        <---------SPL7                                 <---------TOE1(3)                          ---       <---------ANAC58                           --------->ANAC58                                <--       <---------ANAC46                           --------->ANAC58        <---------ANAC46        <--       <---------ANAC58                           --------->ANAC46        <---------ANAC58    <------ ----->At4g35610<---------ANAC58     <----------DOF2   <---------TOE2(3)  <---------ANAC58--------->HSFB2a(2) -ZmHOX2a(1)<---------ANAC46   ---------->DOF2  <-----------GT1---------->DOF2            <---------HSFB2a(2)   gatgaagaggcgtgcggtgagtgcaaagagtcttaaagcctttttatgttttacgctaaggaagacaaagagtttttcttgtacatgaaattcgagaggg  7144500                                                            <------------CBF                                                           <---------AHL20(2)                                                           -------->HAHB4                                                           --------->ATHB51                                           <---------AHL20(2)            <---------GLK1(1)         <----------DOF2      --------->ATHB12       <------------CBF               <---------DAG2       <---------ICU4      --------->ATHB12                --------------->AGL15-------->ATHB1 ------->ZAT6                  >>>>>>>>>>FUS3             --------->ICU4        --------->MYB52(1) -----TEIL--------->ATHB12     >>>>>>>>>>ABI3             <---------YAB1<---------ANAC46 ------>ZAT14               <---------ANAC58        ----------->GT1  <-----------RAV1(1) ------>ZAT18               <---------AtLEC2     <---------ANAC46 <----------DOF2 -------ZAT14               <---------ANAC58   <---------AHL20(2)<---------ANAC58                   < -------ZAT18           <------------CBF   --------->AHL20(2)    <---------ANAC58                   < ---------AtSPL8   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   <---------ATHB51<---------ANAC46         <-   tacactagtcattgatttctcacttacattgcatgcattacttttttaattaagtggataattattggcttttgttgtggattaactgcaatagaattta  7144600                                                                     ---------->DOF2                                                            --------->GLK1(1)                                                        --------->LBD16                                                      ------>ZmHOX2a(2)                                                    <---------AGP1 --------->ANAC58  <--------P                                        --------->ARR11(3) ------MYB46(1)            --------->GLK1(1)  ===============HOX2a_HOX2a                          --- ------MYB83             ====================================HOX2a_HOX2a                        <---- --------MYB46(3)        <------ZmHOX2a(1)    <------ZmHOX2a(1)    --------->ANAC58        <---------   gtgggtagattgaagtcgaagagactaggaattcaaacgagagaactaggaattgatctgggaattcaaacgaaagaaccaagactcatgaggctttgct  7144700  <-----------HVH21                          --------->ANAC58                                <------- ------>GLK1(2)                              --------->ANAC58        <----------DOF2         <------- ------DOF2             <---------GLK1(2)  ---------->DOF2      --------->HSFB2a(1)   ---------->ID1 -DOF2       <------ZmHOX2a(2)        ---------->DOF2           <---------HSFB2a(1)  <-----------GT1   attctgtcatggtcgatcaaatatcaaattcttcaagtttcaaagaaaagccaatagagaattggaacttccttttttgtttatatttttcgttttcttg  7144800  Previous    Next  AGI:  At5g21030.1    Description:  PAZ domain-containing protein / piwi domain-containing protein. similar to AGO6 (ARGONAUTE 6), nucleic acid binding [Arabidopsis thaliana] (TAIR:AT2G32940.1); similar to AGO4 (ARGONAUTE 4), nucleic acid binding [Arabidopsis thaliana] (TAIR:AT2G27040.1); similar to PAZ domain-containing protein / piwi domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G21150.1); similar to AGO4-2 [Nicotiana benthamiana] (GB:ABC61505.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67397.1); similar to AGO4-1 [Nicotiana benthamiana] (GB:ABC61504.1); contains InterPro domain Argonaute and Dicer protein, PAZ (InterPro:IPR003100); contains Int Range:  from: 7139894    to: 7144274    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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