Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       ------>MYB46(1)                     --------->MYB52(1)                     ------>MYB83                    --------->MYB55(1)                   <---------MYB55(2)                   --------->MYB46(3)                  --------->ANAC58                  --------->ANAC46                  --------->ANAC58                <---------GLK1(1)                --------->GLK1(1)                                     <------ZmHOX2a(1)               --------->ARR14(2)                                ----------->RAV1(1)               <---------ARR14(2)                               --------->MYB46(3)              <------ZmHOX2a(1)                            --------->ANAC58         <-------TEIL          <---------TOE1(1)      ----------->HVH21         --------->ANAC58  ----------->GT1          <---------TOE2(1) --------->ALFIN1               --------->ANAC46 <---------ZAT6------->TEIL   cttcggtccaatacgaggatacccaacgatgtgggatgacattgctctattttgttttcacaaacaacaacaggattagtggaaaattcatgaatctaac  7128000          --------->ANAC46        <---------ANAC58        ----------->GT1        <---------ALFIN1          <---------ANAC58      <------ZmHOX2a(1)----------->GT1   aaataatacaacacagcatcaatacatttttcgaatgcttatgcaaattgcaaatggaggatgaaaaacaacctatggtacaaaatcgatactgcaaaca  7128100                      <------MYB83                                      ------>MYB83                      <------MYB46(1)            --------->AHL20(2)     ------>MYB46(1)                     --------->MYB59           ----------->GT1          -------->P                     <---------TOE2(3)   --------->MYB52(1)            ----------->RAV1(1)                 <------ZmHOX2a(1)    --------->TOE2(3)               --------->AtMYB61         --------->TOE1(3)            --------->TOE1(3)            --------->ANAC46          <-------         --------->YAB1               --------->YAB1            <---------ARR14(2)           --------         --------->TOE2(3)    ----------->GT1---------->DOF2    --------->ARR14(2)      --------->YAB1   aacaagagaaaccataacaggattaggttgaatagtgaaaccataacgaaagtaaatagagttgcaaatacaccaacaagagagatagaatcatccgagg  7128200                                              --------->ALFIN1                                              --------->ARR14(2)                                              <---------ARR14(2)                                             <-------GAMYB                                            <---------DEAR3(2)                                         ------------>AtMYB77                                    <---------ANAC46                                   <------NtERF2                                  <---------ORA47(2)                                  <---------ERF1                                  <---------RAP2.3(1)                                  <---------DEAR4(2)                                  <---------ATERF1(1)                                  ------>NtERF2                                 <---------RAP2.6(2)                                 --------->ATERF1(2)                                 <---------ANAC46                                 <---------RAP2.3(3)                                 --------->ALFIN1                                 <---------DEAR3(1)                                  <------NtERF2                                 <---------ATERF1(2)                                --------->LBD16                                <---------ABI4(1)                                  <---------ANAC46                                <------NtERF2--------->ATERF1(1)                   <---------ANAC58                               <---------ATERF1(1)                                 <---------ANAC58                               --------->ALFIN1  <---------ANAC58                 --------->ATERF1(1)                         --------->GLK1(2)  <---------MYB46(3)                    <------NtERF2                         <---------ARR14(2)<---------DEAR3(1)                     <---------LBD16                   <---------ANAC46--------->ATERF1(1)                           <---------MYB46(3)                  <------NtERF2------>NtERF2--------->MYB55(2)                   ------>NtERF2                 ------>NtERF2<---------RAP2.3(3)<---------ANAC46               <---------DEAR3(1)                <---------ETT(2)--------->ATERF1(1)        <---------SPL7       --------->ALFIN1   <-                ----------->HVH21<---------RAP2.3(2)       ----------->HVH21 <---------DEAR3(1)    <- --LBD16   ----------->RAV1(2)<---------DEAR3(1) <---------ANAC58    --------->At4g35610        <---- ->LBD16  --------->GLK1(2)<---------LBD16 <---------RAP2.6(2)       <---------At4g35610      <------ZmHOX2a(1)   gaaatagaagaaaacctggcgacgtagaatcgggggcggcgagaggcggttgcgcaagggagggacggagtagctgaagacggtggcgggagagaaggag  7128300                                                      <---------YAB1                                                     --------->AHL20(2)                             -                                            --------->WRKY12                                        <                   --------->MYB46(3)       ----------->HVH21                              <---------ZAT18                 <---------DOF5.7(2)        --------->WRKY38(1)                            <---------ZAT14  <---------ANAC46--------->RAP2.6(3)     --------->ZAT2                     --------->GLK1(1)    <-- <------NtERF2<---------At4g35610         <---------ZAT2                     <---------At4g35610----- --------ANAC58  --------->MYB52(1)       --------->At4g35610  <---------AtMYB61  ------>ZmHOX2a(1)<- --------ANAC58<---------MYB52(2)         <---------At4g35610<----------DOF2 --------->At4g35610<---- -----DEAR3(1)--------->At4g35610       --------->ZAT18      *TSS            <---------ZAT2--------->ZAT14   ggcgtcttggaagcgaagctaacggctggagtctctgaagagcgagctgacccatttttatagctttggtttcaaactgagctcctatttctgttcacta  7128400                                                                        <-------TEIL                                              --------->AHL20(2)     <---------HSFB2a(1)          <------ZmHOX2a(1)                   <---------YAB1         --------->HSFC1(2)    ---------->DOF2                     <---------TOE1(2)     ------>MYB46(1) --------->LBD16                        <---------TOE2(2)     ------>MYB83        --------->MYB52(1) -------->LBD16                         --------->LBD16       --------->MYB52(1)  ------>MYB46(1) ---------LBD16                        <-----------RAV1(2)  --------->AtMYB61     ------>MYB83 -------LBD16                         <---------LBD16       <---------MYB59     --------->AtMYB61 ---->ARR14(2)                  <---------ANAC58    <---------TOE2(3)<---------HSFC1(2) --------LBD16                  <---------ANAC58    <---------TOE1(3)--------->HSFB2a(1)      ------- -----ARR14(2)            <---------AHL20(2)  <---------AHL20(2) ----------->GT1<---------MYB59    <-   tccggggaaagaggagactctctactatttcatttcgtttcccaggttttaattaaggtaaaccaaaccgaaaattcgtaaaccaaaccgaaaatgaatg  7128500                                                                        <---------YAB1                                                                     <---------YAB1                                                                     <---------AHL20(2)                                                             --------->GLK1(1)                                      ---------->DOF2        --------->CCA1(2)           <---------DAG2                               <---------ANAC58              <---------GLK1(1)           --------->TOE2(3)   --------->YAB1              <---------ANAC58             --------->ARR14(2)  --------->DAG2 >TEIL                         <---------ANAC46             <---------ARR14(2) ---------->DOF2 --------AHL20(2)      <---------MYB52(1)      <-----------GT1       --------->AHL20(2)  --------->TOE1(3)   tttaatcaaattgttgatattttctgttatttggcttatgcaaagtatttttctcatcaagggatatgcatattattacaaaaaagtagaaccttattac  7128600                                                  <---------At4g35610                                                  --------->At4g35610                                          <---------MYB46(2)                                   <---------ANAC58                                   <---------ANAC58               <---------------AGL15      <------------MYB.PH3(2)               --------------->AGL15      <<<<<<<<<<AtMYB44                                --------->ZAT14              ----------------->AGL2      <---------MYB52(2)                          --------->ZAT14              ----------------->AGL3      <---------MYB111(1)                         <---------ZAT14              <-----------------AGL3      <---------MYB59                         --------->YAB1             ----------->RAV1(1)   <---------ANAC55(1)                       <---------At5g28300            --------->ANAC46       <---------ANAC46      --------->ANAC46   <-----------GT1<---------ZAT14   aaaaactacatttcgcaccatatatagtatttgggtttcgtgtaactaactcagcaaacacaaaacttgtcaaaagttttacagtcacaacagtgcagag  7128700                        --------->ZAT2                                       --------->O2           <               <---------ANAC46                                              --------->TGA1a<--------             <----------DOF2                                                 ========================       --------->ALFIN1--------->GLK1(2)<---------------AtSPL8   <----------DOF2       --------->At4g35610     ----------->RAV1(2)--------->At4g35610                      ======================bZIP_DOF <----   caaaatcacttggggctttgtggagaagctggagagttttagtgagtacaagaacatccagcctcttctttcttctctcccgtctcataggctgacttat  7128800                              <---------ANAC58                              <---------ANAC46                              <---------ANAC58                             <------NtERF2                           <---------DEAR3(1)                         <---------ANAC58                        <------MYB46(1)                        <------MYB83<---------ANAC58                      <--------P<---------At4g35610                     <---------MYB52(1)                     <-------GAMYB  <---------ANAC58                                         <-------     --------->PCF2 <---------DEAR3(2)                   --------->HSFC1(2)                  <-------  <---------AtMYB61 <------MYB83--------->At4g35610<---------LBD16     ---------->ID1 <----------DOF2 ----------DOF2     <------MYB46(1) <---------ANAC46   <---------TOE2(2)            --------->At4g35610 -ANAC46 <---------TOE1(2) <---------RAP2.6(2)    --------------------->WRI1      ------>ZmHOX2a(2) ==========bZIP_DOF<---------MYB46(3)<-----------HVH21 <---------TOE1(2)         <---------At4g35610 -----CCA1(2)------->TEIL<---------ANAC58<---------ANAC46<---------HSFC1(2) <----------DOF2  <-------   agctttggtcccatgtatcagtcggtagggtggcttctgcgtgaggtatgtgcttcggatgtttctctctcttgtctcctttgatctgcttcagtgcgtg  7128900  Previous    Next  AGI:  At5g20980.1    Description:  ATMS3 (METHIONINE SYNTHASE 3); 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase/ methionine synthase. similar to AtMS2 (Arabidopsis thaliana methionine synthase 2) [Arabidopsis thaliana] (TAIR:AT3G03780.3); similar to ATCIMS (COBALAMIN-INDEPENDENT METHIONINE SYNTHASE) [Arabidopsis thaliana] (TAIR:AT5G17920.2); similar to ATCIMS (COBALAMIN-INDEPENDENT METHIONINE SYNTHASE), 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase/ methionine synthase [Arabidopsis thaliana] (TAIR:AT5G17920.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67498.1); similar to methionine synthase [Carica papaya] (G Range:  from: 7124158    to: 7128361    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g20990.1    Description:  B73 (CHLORATE RESISTANT 6); molybdenum ion binding. Identical to Molybdopterin biosynthesis protein CNX1 (CNX1) [Arabidopsis Thaliana] (GB:Q39054); similar to molybdenum cofactor biosynthesis protein [Zea mays] (GB:ABB30174.1); similar to molybdenum cofactor biosynthesis protein Cnx1 [Hordeum vulgare] (GB:AAF73075.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67405.1); contains InterPro domain Molybdopterin binding; (InterPro:IPR001453); contains InterPro domain MoeA, N-terminal, domain I and II (InterPro:IPR005110); contains InterPro domain Molybdenum cofactor biosynthesis, conserved site; (InterPro:IPR008284); contains Int Range:  from: 7128477    to: 7133478    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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