Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     <---------At4g35610                                                            <---------ICU4                        ---                                                            --------->ATHB12                   ------                                                           --------->ICU4                     -------                                                    --------->At4g35610                       <------                                             --------->ATHB12      --------->At4g35610   --------->ANAC58         <----------ID1                    <---------WOX13(1) <---------WOX13(1)         --------->ANAC46  ----------->GT1                   <---------CCA1(2)      <---------YAB1      --------->MYB52(1)<--- ---------->GT1                    <---------MYB52(1) --------->ANAC46     <-------TEIL  --------->ANAC58 ---TOE2(3)                       <---------DAG2    <---------At4g35610   --------->CCA1(2)   <------   aacagagaaaaaaaacaaacttacttcttgctcttcccttatctcattgatttcatcagccatgattgcaactgagatacaaaacgaaaacacacaatga  7096700    --------->ARR11(3)    <---------ARR11(3) ------>YAB1 --->YAB1 -->ICU4                                      ----------->GT1        --------->ANAC58 ---YAB1                <-------TEIL       --------->GLK1(2)         --------->ANAC58     XXXXXXXXXXX ------YAB1      ------>MYB46(1)       --------->YAB1            --------->ANAC58<---------TOE1(3) ---ATHB12       ------>MYB83       --------->YAB1               --------->ANAC58<---------TOE2(3) --   taataagacctcagaaaccaaacatatacatattagaatcaacataatctgtaacaacgatgagcataggcaagtccgaaattagggtttctaaatcaga  7096800                                                                                   --------->ANAC58                                                                                   --------->ANAC58                                                                                   <----------ID1                         --------->MYB52(1)                                        --------->ANAC46                      --------->YAB1                                              --------->SPL7           --------->ANAC46                                                   <---------------AtSPL3           --------->ANAC58                                                --------->AHL20(1)           --------->ANAC58     --------->GLK1(2)             --------->AHL20(2)--------->TOE1(2)     <---------LBD16  --------->TOE1(3)    <----------DOF2--------->YAB1   --------->AHL20(2) XXXXXXXXXX>MIR2933A/B--------->TOE2(3)    <---------DAG2 --------->AHL20(2)  <---------------AtSPL8 --------->GT1----------->RAV1(1)<-------TEIL            <---------ATHB12  <---------AHL20(2)      --   gaggtaattcggaacgcaacaaaaccataacgagattcagaacaacttttcgattcccaataaaaaaaatacccaaataaaatgtacgacaaggcttcaa  7096900                <------MYB46(1)            --------->ZAT2     --------->ANAC46     --------->ANAC58    --------->GLK1(2)     --------->ANAC58    ------>MYB83   --------->MYB52(1)    ------>MYB46(1)       <---------HSFB2a(2)  <---------ARR14(2)    --------->WOX13(1)     --------->HSFB2a(2)  --------->ARR14(2)<-----------GT1 --------->ANAC46                                     --------->DAG2 ------->YAB1   <------MYB83      <-----------GT1                     <------ZmHOX2a(2) ---------->DOF2   atcagaaacggaacagctaggtttaccaatctgtttatactcaattcttccaaaaacacgatttactctgagatcgaccagaagaattcgaaaaggaatc  7097000                                                                                                  <--                                                                                                 <---                                                                                           <------NtERF2                                                                                           --------->ATERF1(1)                                                                                           <---------                                                                                          ------>NtERF2                                                                                        --------->RAP2.3(1)                                                                                        --------->RRTF1(1)                                                                                        <------NtERF2                                                                      --------->At4g35610<---------ANAC46                                                                      <---------At4g35610--------->DEAR3(1)                                                                     --------->GLK1(2)  --------->ATERF1(1)                                                              <---------HSFB2a(2)      <---------RAP2.3(1)                                                              --------->HSFB2a(2)      <---------ATERF1(1)                                                             <---------LBD16           <---------DEAR4(2)                                       <------NtERF2        <---------LBD16            <---------ORA47(2)                                     <---------ANAC58     <---------ANAC58            <---------RAP2.3(2)                                     <---------ANAC46     <---------ANAC58            <---------DEAR3(1)                                     <---------ANAC58     <---------ANAC46           <---------At4g35610          ---------->DOF2 --------->At4g35610          <--------P  <------ZmHOX2a(1) --------->At4g35610   gaagaaaactcacaaagggatgtctaagcgctgaaattggcgtagagagtaaacgaggttgcttcgggaggaatctgagagagagtaagcggcgcagggg  7097100                                                                <---------DAG2                                                                <----------DOF2           <---------ARR11(3)                                                             <-----------GT1              --------->ARR11(3)                                                          ----------->GT1             ---------->DOF2                                                        <------------CBF          --------->YAB1 -------MYB46(3)                                    --------->HSFB2a(2)      --------->AHL20(2) -----P           *TSS                 --------->AHL20(2) --------->YAB1     ------------>CBF --RAV1(2)   --------->CCA1(2)   ------>ZmHOX2a(1)  <---------HSFB2a(2)  <---------AHL20(2)         -   ttgttttaatctgagataagagttaacccttgctcctccaaaaaaatagtccatctcgaattgtaacttttttttttaattcaatagtaaaaggtctctg  7097200                                                                                      <---------WOX13(1)                                                                                    <---------AHL20(2)                                                                                    --------->ATHB12                                                                                   --------->AHL20(2)                                                                           <---------AHL20(2)                                              <----------DOF2         <---------AHL20(2)                                    <-----------GT1--------->TOE2(3) <---------AHL20(2)           ---     <---------AHL20(2)     <-----------GT1 ---------->ID1           --------->AHL20(2)----------->HVH21 <---------AHL20(2)     <---------YAB1     <-----------GT1     <-----------GT1     <---------AHL20(2) <---------ICU4     --------->TOE1(3)  <---------DAG2      <---------TOE2(2)  <<<<<<<<<GATA-1    <--- -------->ICU4      --------->TOE2(3)  <----------DOF2     ------->TEIL   --------->AHL20(2)   ------   taaatatttcattttgcctaaaccttaatattacatttttacttttttctttttcttaacgcatgttacattttaattttatctattaattgacactgag  7097300             --------->AHL20(2)             <---------AHL20(1)                                                              <-------          <---------AHL20(2)    --------->WOX13(1)                                           --------        <---------YAB1         --------->AHL20(2)                                           ---------      --------->YAB1       --------->AHL20(2)               <---------AHL20(2)    <---------AHL20(2)     --------->AHL20(2)    <---------AHL20(2)              --------->AHL20(2)    --------->AHL20(2)<-     <---------AHL20(2)    <---------AHL20(1)              <---------AHL20(2)  --------->ARR11(3)  -- <---------YAB1            --------->AHL20(1) <---------AHL20(2)               <---------ARR11(3)  -- ------>GLK1(2)        --------->ICU4        --------->AHL20(2)     <-----------GT1     <---------YAB1 ------GLK1(2)      ---------->ID1<---------ATHB12         <---------AHL20(1)<---------YAB1 <-------- ----->ARR10 <---------AHL20(2)<---------AHL20(2)     <---------ATHB12       <---------TOE2(3)  -----   attctcatttattattttatttgtcttaattaattaatcaattgaaattttatcaaatcaattttttttttttcaaattaagatttatttcttattaaat  7097400                                                                                                  ---                                                                                                  <--                                                                                    --------->AHL20(2)         <---------AHL20(2)                                                         <---------AHL20(2)      --------->YAB1                                                               --------->AHL20(2)      ----------->GT1                                              <---------AHL20(2)             --- --AHL20(2)                   <---------AHL20(2)                   <---------AHL20(1)             <-- ->AHL20(2)                  --------->AHL20(2)                    --------->AHL20(2)             <-- >AHL20(2)                   <---------AHL20(2)                    --------->ARR11(3)             <-- --------ANAC46    <---------AHL20(2)         ----------->GT1      --------->AHL20(1)            ---- ------------->AGL15   ----------->GT1    ------->TEIL       --------->YAB1     --------->ICU4   <--- --------->GT1   <---------AHL20(2)<---------AHL20(2)     <---------GLK1(1)<---------ZAT6        <--- -AHL20(2)   <---------AHL20(2)    <---------YAB1---------->DOF2   <---------ARR11(3)            <--- ---->GLK1(2)--------->AHL20(2)    --------->AHL20(2)---------->DOF2<---------AHL20(2)         ------   tctgtgaatagtaaattatataaaaatgttattaaatataaatgaaactagtaaagaaagaaatcagaatatatttagtgtcaaaattaatagtctagca  7097500                                              --------->AHL20(2)                                          <---------AHL20(2)                                      --------->AHL20(2)                                     <---------YAB1                                  --------->AHL20(2)       <-----------GT1            <---------AHL20(2) ------>ARR14(2)                  <---------AHL20(1) -------ARR11(1)             <---------AHL20(2) ------>ARR11(3)          <---------AHL20(1)  <---------AHL20(1) ---------ARR10           <---------AHL20(2)  --------->AHL20(1) -------ARR11(3)          --------->AHL20(1)  <---------AHL20(2)                          --------->ANAC46 -------ARR14(2)          --------->AHL20(2)  --------->ARR11(3)      <---------ARR11(3)  <xxxxxxxxxx ----->GLK1(1)           --------->YAB1  --------->AHL20(2)  ------------>MYB.PH3(2) <xxxxxxxxxxxxxxx ------GLK1(1)           --------->AHL20(2)   <---------ARR11(3)<---------MYB46(3)  <xxxxxxxxxxxxxxxx ------CCA1(2)           <---------AHL20(2)  <---------------AGL15    --------->ARR11(3) <---------LBD16 ------ARR14(1)  <-----------GT1  --------->AHL20(1)--------->ANAC55(2)     <---------ANAC55(2)  <--- --->YAB1    --------->AHL20(2)<---------AHL20(2)   <---------ANAC55(2)     ----------->GT1--------->LBD16   tatcttattttactataaattactaaattatattattttattatttaatatattaagtattttagtttgttagatattcagtaacaaaatttccgcaaat  7097600  Previous    Next  AGI:  At5g20920.1    Description:  EIF2 BETA (EMBRYO DEFECTIVE 1401). Identical to Eukaryotic translation initiation factor 2 subunit beta [Arabidopsis Thaliana] (GB:Q41969;GB:Q8L7Q3;GB:Q9C5N7); similar to translation initiation factor [Arabidopsis thaliana] (TAIR:AT3G07920.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21302.1); contains InterPro domain Translation initiation factor IF2/IF5, N-terminal; (InterPro:IPR016189); contains InterPro domain Translation initiation factor IF2/IF5; (InterPro:IPR002735); contains InterPro domain Translation initiation factor IF2/IF5, zinc-binding; (InterPro:IPR016190) Range:  from: 7094720    to: 7097118    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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