Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     <---------AHL20(2)      --------->DAG2--------------->AGL15                                            --------->AHL20(2)     ---------->DOF2<---------------AGL15                                    <------ZmHOX2a(1) ---->TOE2(3)       --------->TOE2(3)                                       ----------->GT1 ---->TOE1(3)     <-------TEIL    --------->AHL20(2)                --------->AHL20(2) ---GT1----------->GT1     ----------->GT1                  <---------YAB1 ----------->GT1   ttaaccaaaaagttataagttacattaagaagtaaattttatagtttcgacaattttgcattttgtttgattatatagaggaaaaaaaaaaatgttccat  7090300                                                               <---------ANAC46                                                             --------->ATHB12                                                          <---------ANAC58                                                     <---------AHL20(2)                                                     --------->AHL20(2)                                                    <---------AHL20(2)                                                    --------->AHL20(2)                                                 --------->AHL20(2)                   --------->ATHB12              <---------AHL20(2)                  <---------YAB1                 --------->AHL20(1)                  --------->ICU4                 <---------AHL20(1)           ----------->GT1             <------MYB83<---------At4g35610    --------->AHL20(2)        --------->ARR14(2)             <------MYB46(1)               ----------->GT1<---------ANAC58<---------ARR14(2)    <----   atacaaatttgaatttggtgatgatttagcggtcgaatacaaaaacagaaataaattaattcgtgatttgtatgcgaatattgttactaaaaaaaactat  7090400                <---------AHL20(2)  <---------YAB1            <---------HSFB2a(2)               --------->AHL20(2)<---------YAB1         <-------TEIL                        ---------         <-----------------------TaNAC69(2)  <---------At4g35610                          --------->MYB52(1)   ---------->DOF2    ---------->DOF2        --------->At4g35610                          ----------- -----YAB1<---------ANAC46      --------->TOE2(3)--------->WRKY18(1)           <----------ID1     <--   aaatgtaaagaggcttataaaatagaaagagaaacattataaatgtaagcagtcaaggtccattttagaagtcattttaagacgactaagcccaacagta  7090500                                                                                          ------->GAMYB                                                                                          -----------                                                                                          <----------                                                                                         ------------                                                                                         ------------                                                                                       --------->MYB52(1)                                                                                      --------->GLK1(1)                                                                                  --------->HSFB2a(2)                                                                                  <---------ANAC46                                                                               <---------ARR14(2)                                                                               --------->ARR14(2)                         <---------At4g35610                           <-------MYC3   <---------GLK1(1)                        --------->ANAC58                    --------->AHL20(2)--------->GLK1(1)                        --------->ANAC58                    <---------AHL20(2)<---------GLK1(1) >ZAT6                <-------TEIL                --------->ANAC46<-----------GT1<---------LBD16 >RAV1(1)  <---------ATHB12               <-----------GT1--------->YAB1------->MYC3--------->LBD16 -- --------DOF2 ------->TEIL                <---------DOF5.7(2)   --------->AHL20(2)<---------HSFB2a(2)   ctttaagagcccaatgaatcaaggtccagcaaactcaattagtttaacgtctcagccacttataaattatacacgtttggagttccggataaccgaaatg  7090600                                    --------->YAB1                                  <---------ARR11(1)                                 <---------ARR14(1)                                 <---------CCA1(2)                            <---------ALFIN1          <---------YAB1                         --------->ANAC58        ------->MYC2                               ---------          <---------ALFIN1------->GAMYB<---------ARR14(2)  <---------At5g28300    <---------ANAC46       --------->PCF2    --------->ANAC46        ------->MYC3                     <---------ANAC58 ---->AGL15              --------->MYB46(3)      <-------MYC3                   <-----------HVH21 -----AGL15              --------->ANAC58        <-------MYC2                  <-----------RAV1(1) ----->AG ----------->RAV1(1)------>NtERF2      --------->ANAC58             <---------At5g28300 ----->AGL1            --------->MYB52(1)       --------->ANAC58    ---------->ID1<---------ANAC58  - -------->DOF2        <---------WRKY12 --------->ARR14(2) <-----------GT1<----------DOF2    =========   agaaagcatgtcccacatagaaggccaacgacaccgtatcatattcgagcacgtttctaattaccctcttgttgtcttttactgtcgtagcaccaaaagt  7090700                                                                          --------->LBD16                          <---------At4g35610                       <---------HSFB2a(1)                          --------->TGA1a              <------ZmHOX2a(1) <---------LBD16                          --------->At4g35610          ----------->GT1<---------ARR14(2)                          <---------ZAT2              ----------->GT1 --------->ARR14(2)                          --------->O2        --------->At4g35610   --------->HSFC1(2)      *TSS     <---------ARR11(3)          <---------HSFC1(2)       --------->HSFB2a(1)     --------->YAB1       <---------O2     --------->HSFC1(2)       <---------HSFC1(2)     --------->AHL20(2)   --------->ZAT2   --------->HSFB2a(1)      <---------MYB46(3) ->DOF2        --------->ARR11(3)        <------ZmHOX2a(1)         <---------TOE1(2) ----------->CBF        <-----------RAV1(2)<---------HSFB2a(1)     <---------TOE2(2)               -- ===================================bZIP_DOF --------->GLK1(2) <---------LBD16        <---------ANAC46   caaacaataaaaatcaatatctatcgccaggtgtcaaattacaggagcttctgagaaggataaatctcggaggttcccggtctgaacgacgtagagacga  7090800                                                          ------>ZmHOX2a(2)                                                         <------ZmHOX2a(2)                                                         --------->CCA1(2)                                                        --------->AGP1                                                        --------->ARR11(3)                                                        <---------ARR14(2)        --------->ICU4                                                        <---------AGP1       --------->ANAC58                                          --------->At4g35610            --------->CCA1(2)           --------->ZAT18             <---------YAB1   --------->ARR14(2)   --------->ANAC58      ---------->DOF2              <---------GLK1(2)    <---------ARR11(3)   --------->ANAC46-------- --------->GT1                 --------->YAB1   ---------->DOF2         <----------ARF1 <---------TOE2(3)   agcgaaacaaaagtactctaagggagagaagtatcaaaattctcatcggaaaaagacagatctacaaattttgagagacaagccatgactaaggtgaaag  7090900                                                        <------NtERF2                                                        --------->ZAT2                                                        <---------At4g35610                                                        --------->At4g35610                                                      <---------RAP2.6(2)                                                      <------NtERF2                                                     ------>NtERF2                                                     --------->ABI4(2)                                                    --------->ALFIN1                                                    <---------DEAR3(1)                                                    --------->DEAR3(1)                                                   --------->ATERF1(1)                                                   <------NtERF2                                                  <---------DEAR4(2)                                                  <---------RAP2.6(1)                                                  <---------ORA47(2)                                                  <---------RAP2.3(1)                                                  <---------RRTF1(1)                                                  <---------DEAR3(2)                                                  <---------ERF1                                                  <---------ATERF1(1)                                                 <---------RAP2.3(3)                                                 <---------RRTF1(2)                                                 <---------DEAR3(1)                                                 --------->DEAR3(1)                                                 <---------RAP2.3(2)                                                 <---------RRTF1(3)                                                <------NtERF2                                                <---------ABI4(1)                                               <---------RRTF1(1)                                               <---------ATERF1(1)            ------>ZmHOX2a(2)                                               ------>NtERF2                --------->GLK1(2)                                               <---------ERF1               <---------ARR11(3)                                              <---------ANAC46              <---------ARR11(1)                                              <---------ATERF1(2)           <---------AGP1                                              <---------DEAR3(1)            --------->ARR14(2)                                              --------->ATERF1(2)           <---------ARR14(2)                                              <---------O2                 <---------ARR14(1)                                              <---------RAP2.3(2)          <---------CCA1(2)                                              <---------RAP2.3(3)      --------->MYB52(1)                                              <---------RRTF1(3)       --------->SPL7                                              <---------RRTF1(2)     <---------SPL7                                              <---------bZIP60(1)    <------NtERF2                                           ----------->HVH21         --------->ATERF1(1)                --------->WRKY12           ----------->TGA1   --------->ARR14(2)              --------->LBD16           <---------DEAR3(1)    <---------ARR14(2)              <-------GAMYB            <------NtERF2<---------ANAC46<---------ATERF1(1)      <-------PIF5                   --------->DEAR3(1) <---------ZAT2--------->ARR14(2)      ------->PIF5                   ----------->HVH21<---------DEAR3(1)<---------LBD16      ------->MYC3                  --------->DEAR3(2)--------->ATERF1(1) --------->LBD16      <-------MYC3             <---------REM1(1)--------->ATERF1(1) <---------DEAR3(2)      ------->MYC2             --------->ALFIN1<---------RAP2.3(1)  <---------MYB46(3)      <-------MYC2             <-----------RAV1(1)------>NtERF2 ------>ZmHOX2a(2)     <---------ALFIN1       --------->ALFIN1<---------ATERF1(1)<------ZmHOX2a(2)     --------->ANAC58       <---------AtMYB61 <---------RAP2.6(2)  <---------DEAR3(1)     --------->ANAC58  <---------MYB46(3) <-----------HVH21 ----------->ARR10<------ZmHOX2a(2)  <----   <---------ALFIN1   --------->ALFIN1------>NtERF2--------->RAP2.3(1)<---------ARR14(2)       ------ -->DOF2     <---------ANAC46<---------ANAC46--------->ATERF1(1)<---------DEAR3(1)     --------->GLK1(1)   atgagccacgcgcttccgttgaaggtggatgtggtgttgccgacggtgacggcggcgcggctgagatcggcggtaccggatctgttgagaaatcgattaa  7091000            --------->ZAT2            --------->At4g35610            <---------At4g35610                                            ==========================     <---------ANAC46                                                      ==========================     <---------ANAC55(2)                                                   <---------------AGL15     <------MYB83                                                    <---------------AtSPL8     <------MYB46(1)                                                 --------------->AtSPL8         -    --------->MYB59                                                 <---------ZAT14  --------->ARR11(3)    --------->MYB46(2)          <-----------GT1              <----------DOF2         ------->TEIL   -    --------->MYB111(1)<---------ZAT6                       <---------ANAC58        <---------CCA1(2) -----TOE2(3)          <-----------RAV1(1)              <----------DOF2    --------------->AGL15    < --->MYB52(1)      <---------ZAT14         <-----------GT1  <---------ANAC58  <---------YAB1   <-----   cgaagttaggtatgagctgtgtttactgttgatttcacatgtttttatctgtttctctctttgctttgagtttagtacttaaaattgtatcttgtttctg  7091100                                    <-----------------AGL2                                    ----------------->AGL2       <------ZmHOX2a(2)            ----------------->AGL3      <---------ARR11(3)            <-----------------AGL3      --------->ARR14(2)            <-----------------AG      <---------ARR14(2)           <-----------------AG      --------->ARR11(3)    --------->TOE2(3)    ----------->ARR10       <----------DOF2  =========================HOX2a_HOX2a        ---------->DOF2  <------ZmHOX2a(1)   ----------->GT1<---------------AGL15 ====================================================MADS_MADS ====================================================MADS_MADS -------->ANAC58    ------>ZmHOX2a(2)--------------->AGL15 -------->ANAC58  <---------AGP1   <-----------------AGL1                                        <--- ---------TOE2(3) <---------ARR14(2)<-----------------AGL1                                 --------->ATHB12 ----YAB1         --------->ARR14(2)----------------->AGL1                          <---------ANAC46-   ataaggaagatcagcatttcgatctggttactttagtttctatttagggaaagtcatatttctcaatggaaccaatttgttttttggctggaacaattgg  7091200  Previous    Next  AGI:  At5g20900.1    Description:  JAZ12/TIFY3B (JASMONATE-ZIM-DOMAIN PROTEIN 12). Identical to Protein TIFY 3B (TIFY3B) [Arabidopsis Thaliana] (GB:Q9C5K8); similar to JAZ11/TIFY3A (JASMONATE-ZIM-DOMAIN PROTEIN 11) [Arabidopsis thaliana] (TAIR:AT3G43440.1); similar to ZIM [Medicago truncatula] (GB:ABN08340.1); contains InterPro domain ZIM (InterPro:IPR010399) Range:  from: 7090706    to: 7092541    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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