Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 ---------->DOF2                                                                           ----------->RAV1(1)                                                              --------------->AGL15                                                              <---------------AGL15                                                             ----------------->AGL2                                                             ----------------->AGL1                                                             ----------------->AG                              --------->ZAT14           <---------ATHB12  --------->MYB46(3)                              <------ZmHOX2a(2)     --------->MYB46(3)    --------->REM1(1)       ---------->ID1  <-----------GT1             ------>MYB83  ---------->DOF2      ----------->GT1   <----------DOF2 <---------ZAT6  --------->YAB1  ------>MYB46(1)      ----------->RAV1(1)        <- ---At5g28300--------->DAG2   <---------ZAT14<---------ZAT18 ----------------->AGL3 ---------->DOF2-- ----GT1    ---------->DOF2  <---------ARR11(3)   ----------->RAV1(1)   ------------------------>ANAC81   atgccctttggccctaaagtagacttaaccagatcactgatagccattgcaccaacaaatgatgcctaaaagagcaacaacaaaagaaaagaaaatcaga  7089700                                                                     ------->PIF5                                                                     <-------PIF5                                                                     ------->MYC3                                                                     <-------MYC2                                                                     <-------MYC4                                                                     ------->MYC2                                                                     <-------MYC3                                                                    --------->HSFB2a(1)                                                                    --------->ANAC58                                                                    --------->ANAC58                                                                   <---------TOE1(2)                            --------->TOE2(3)                      <---------TOE2(2)                 <---------ARR14(2)                               <------------OsbHLH66          <---                 ------->TEIL                                     <---------ALFIN1             <-----            ----------->GT1 --------->TOE1(3)                  ------>ZmHOX2a(1)          --------->YAB1 --------AHL20(2)--------->ARR14(2)                         ------>MYB46(1)        --------->ZAT14 ------->AHL20(2)--------->GLK1(2)   ------>ZmHOX2a(1)      ------>MYB83           <---------ZAT14   tttaaacagtagaagagtgaatctgaaaaaccctaaatcctaatcgattcaaaagactcaccatcctcgcacgttctcccttctcttcactagcatcatc  7089800      ------>ZmHOX2a(2)     <------ZmHOX2a(2)    --------->ARR14(3)                                                                              -    <-----------ARR10                             <---------ZAT14                                  --    <---------AGP1                                --------->ZAT14                                 <--    <---------ARR14(3)                            <---------ZAT18     <------ZmHOX2a(1)           <--    --------->ARR14(2)                            --------->ZAT18 ---------->DOF2                 ---    --------->ARR11(3)--------->ANAC58       ------->GAMYB    --------->ANAC58     --------->MYB52(1)    <---------ARR14(2)<---------ANAC55(2) --------->MYB52(1)  ------------------------>ANAC81     <--    <---------ARR11(3)--------->ANAC55(2) <---------DOF5.7(2) --------->ANAC58    ----------->HVH21<- -------DOF2          --------->ANAC58  --------->DOF5.7(2)  --------->DAG2     --------->CCA1(2)---- ----YAB1             --------->ANAC46 <---------At4g35610  ---------->DOF2---------->DOF2<------ZmHOX2a(1)   tttgaagatcttatcgatctaaatacgaaatagctaagttcagttaacggagagcactggggaaaagcaaaaggattgaaagagacgacggaggaacatt  7089900              ----------->GT1            ------------------------>ANAC81      --------->HSFB2a(2)      <---------HSFB2a(2)                                          --------->ARR14(2)     <---------LBD16                               <---------GLK1(1)    <------NtERF2                                 --------->ARR11(3) -------->LBD16                              <---------ANAC46      <---------ARR14(2) ------->ATERF1(2)                         --------->ARR14(2)      --------->GLK1(2) ---------------AGL1            --------->HSFB2a(1)--------->GLK1(1) -------LBD16--------->At4g35610<---------HSFB2a(1)--------->CCA1(2) -------------->AGL1            <---------HSFC1(2)<---------ARR11(3) ---------------AG              --------->HSFC1(2)--------->ARR14(2) --------ATERF1(2)           <------ZmHOX2a(1)    <---------ARR14(2)                               -- ----->MYB52(1)    ---------->DOF2         <---------ARR14(2)      ------->TEIL                    ==   accggcatcgggaagagcggaaaaagaagaaggaggcttcttcagtatcggagatatccaagttagtcgaatctgagactagcgagaaacaatagatggg  7090000                                                                                                   --                               <---------HSFB2a(2)                                                 <-                              ------>ZmHOX2a(2)                                                   <--                             <------ZmHOX2a(2)                                                  <----                             --------->GLK1(1)                                                 ------                            --------->GLK1(2)<---------ZAT14                                 <-------                            <---------ARR14(3)                                               <-------                            --------->ARR11(3)                                               --------                            <---------AGP1<---------ANAC58                                   <-------                            --------->ARR14(3)                                               --------                            <---------ARR14(2)                                               <-------                  --------->ANAC58        <---------ANAC58                                   <-------                  --------->ANAC58        <---------ANAC46                                   --------     --------->ANAC46       --------->ARR14(2)                                     *TSS      --------   <---------DOF5.7(2)      <---------ARR11(3)   <----------DOF2                <----------ID1<------ZmHOX2a(2) --------->DOF5.7(2)       <------ZmHOX2a(1) <---------ZAT18               <------ZmHOX2a(1)<-------- ---->ZmHOX2a(2)---------->DOF2--------->HSFB2a(2)                         ==========================HOX2a_HOX2a =================================HOX2a_HOX2a--------->ZAT18----------->GT1==========================   atcgttcacgaagaacgaacaagccgagaggatctcgaaatattgagtgtgcttttgaagaagagtagaaaatgagaggagagagccaaaacccagatct  7090100     --------->TOE2(3)     --------->TOE1(3)  <---------ARR14(2)  --------->ARR14(2) ------->HSFB2a(2) --------HSFB2a(2) -------LBD16 ------DOF2 >ZmHOX2a(2) --ARR14(2) --AGP1 ->ARR14(3) ----ARR10 ->AGP1                          -------->P        --------->GLK1(1) --ARR14(3)                    <---------MYB111(1) <---------GLK1(1) --ARR11(3)                  ------>MYB46(1)      <---------GLK1(2) ->ARR14(2)                  ------>MYB83       <---------TOE1(2)   ----------->GT1             ----- ->ARR11(3)                <---------MYB59    <---------LBD16--------->ZAT18                <-------- -CCA1(2)            ---------->DOF2      --------->GLK1(1)  <---------ZAT18           <---------TOE2(3) =HOX2a_HOX2a ------->TEIL --------->AtMYB61<-----------GT1 --------->ANAC46    ---------->DOF2 -----   ttcggaaccctaaatgaaactcgtaaagaccaaactaccctcgtatttcccagatttcttatgcgcccttcagtaaaaactaaaaagtttagattaaccc  7090200                                   <---------AHL20(2)      --------->DAG2--------------->AGL15                                            --------->AHL20(2)     ---------->DOF2--------->TOE2(3)                                        <------ZmHOX2a(1) ---->TOE1(3)       <---------------AGL15                                   ----------->GT1 ---GT1----------->GT1     ----------->GT1                          --------->AHL20(2) ---->TOE2(3)     <-------TEIL    --------->AHL20(2)        <---------YAB1 ----------->GT1   ttaaccaaaaagttataagttacattaagaagtaaattttatagtttcgacaattttgcattttgtttgattatatagaggaaaaaaaaaaatgttccat  7090300                                                               <---------ANAC46                                                             --------->ATHB12                                                          <---------ANAC58                                                     --------->AHL20(2)                                                     <---------AHL20(2)                                                    --------->AHL20(2)                                                    <---------AHL20(2)                                                 --------->AHL20(1)                   --------->ATHB12              <---------AHL20(1)                  <---------YAB1                 --------->AHL20(2)                  --------->ICU4                 <---------AHL20(2)           ----------->GT1             <------MYB46(1)               ----------->GT1<---------ANAC58<---------ARR14(2)             <------MYB83<---------At4g35610    --------->AHL20(2)        --------->ARR14(2)    <----   atacaaatttgaatttggtgatgatttagcggtcgaatacaaaaacagaaataaattaattcgtgatttgtatgcgaatattgttactaaaaaaaactat  7090400                <---------AHL20(2)  <---------YAB1            <---------HSFB2a(2)               --------->AHL20(2)<---------YAB1         <-------TEIL                        ---------         <-----------------------TaNAC69(2)  --------->At4g35610                          --------->MYB52(1)   ---------->DOF2    ---------->DOF2        <---------At4g35610                          ----------- -----YAB1<---------ANAC46      --------->TOE2(3)--------->WRKY18(1)           <----------ID1     <--   aaatgtaaagaggcttataaaatagaaagagaaacattataaatgtaagcagtcaaggtccattttagaagtcattttaagacgactaagcccaacagta  7090500                                                                                          -----------                                                                                          <----------                                                                                          ------->GAMYB                                                                                         ------------                                                                                         ------------                                                                                       --------->MYB52(1)                                                                                      <---------GLK1(1)                                                                                  <---------HSFB2a(2)                                                                                  --------->HSFB2a(2)                                                                               --------->ARR14(2)                                                                               <---------ARR14(2)                         <---------At4g35610                           <-------MYC3   --------->GLK1(1)                        --------->ANAC58                    --------->AHL20(2)--------->GLK1(1)                        --------->ANAC58                    <---------AHL20(2)<---------GLK1(1) >ZAT6                <-------TEIL                --------->ANAC46<-----------GT1<---------LBD16 >RAV1(1)  <---------ATHB12               <---------DOF5.7(2)   --------->AHL20(2)<---------ANAC46 --------DOF2 ------->TEIL                <-----------GT1--------->YAB1------->MYC3--------->LBD16 --   ctttaagagcccaatgaatcaaggtccagcaaactcaattagtttaacgtctcagccacttataaattatacacgtttggagttccggataaccgaaatg  7090600  Previous    Next  AGI:  At5g20890.1    Description:  chaperonin, putative. similar to chaperonin, putative [Arabidopsis thaliana] (TAIR:AT3G11830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61999.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83943.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ53591.1); contains InterPro domain Chaperonin Cpn60; (InterPro:IPR001844); contains InterPro domain Chaperonin TCP-1, conserved site; (InterPro:IPR002194); contains InterPro domain Chaperonin Cpn60/TCP-1; (InterPro:IPR002423); contains InterPro domain T-complex protein 1, beta subunit; (InterPro:IPR012716); contains InterPro domain GroEL-like Range:  from: 7086655    to: 7090083    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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