Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                --------->ZAT6                             --------->ZAT18                        ---------->DOF2 ------>GT1         <---------At4g35610 -ARR11(3)          --------->At4g35610            <---------ICU4 -ARR14(2)       ------>ZmHOX2a(1)             <---------AHL20(2)               --------->YAB1 >ARR11(3)      --------->TOE2(3)          <---------AHL20(2)                  <---------YAB1 >ARR14(3)     ------>ZmHOX2a(2)           --------->YAB1                <---------ARR11(3) -ARR14(3)   --------->ARR14(2)            --------->AHL20(2)           <---------ALFIN1        ----- -GLK1(2)    <---------ARR11(3)      --------->ANAC46    <----------DOF2<---------CCA1(2) ----------- >ARR10      --------->ARR11(3)   --------->ARR14(2)<----------DOF2   <---------ALFIN1  --------->At4g35610   gtaaaatccatccatgatcctcagcaaaaagaacactatccacaattatataatcttttctttagaataagcccacatcttataataagcttctgacata  7043500                                                                --------->AHL20(2)                                                             --------->YAB1                                                            <---------YAB1                                                          -------->ATHB1                                                          --------->YAB1            <---------------AtSPL8                                                          <---------ICU4            --------------->AtSPL8                                                         <---------AHL20(2)<---------ICU4                                                     --------->AHL20(2)   --------->ICU4                                                   ----------->GT1      <---------ICU4                                            --------------->AGL15    --------->YAB1---------->DOF2        <-----------GT1                <------ZmHOX2a(2) --------->AHL20(2)--------->YAB1   --------->TOE2(3)            --------->MYB52(1) --------->ANAC55(2)  --------->YAB1 --------->ARR11(3)             <-----------GT1    <---------ANAC55(2) --------->ICU4 <---------ARR11(3)        --------->AHL20(2)     --------->MYB59  --------->AHL20(2)    <---------ANAC55(2) ---->AHL20(2)          --------->YAB1<---------ARR11(3) --------->ICU4<---------YAB1    --------->ANAC55(2) >HVH21<---------YAB1  <---------YAB1<------ZmHOX2a(1)   <---------ATHB51 <---------YAB1<-------TEIL   aattatcttattactaaattgatatatcataaattaacaggatcaactaagttaagtaaattattataaaataataataataagttaaagtacataatac  7043600                     <----------DOF2                     --------->TOE1(3)                     --------->TOE2(3)              --------->AHL20(2)              <---------AHL20(2)                                           --------->At5g28300           <---------ICU4            --------->ANAC58                     ----------->GT1          --          --------->ICU4             --------->ANAC58                 --------->DAG2          -------        --------->ANAC55(2)         <---------LBD16       --------->YAB1 ----------->GT1    ---------        <---------ANAC55(2) --------->ANAC58  --------->ALFIN1       ---------->DOF2       --------->DAG2     <------ZmHOX2a(2)      --------->ANAC46  ----------->GT1 --------->DAG2              ---------->DOF2    <---------ARR11(3)      --------->ANAC58<---------ANAC46 ---------->DOF2      ----------->GT1 ---   attatagatcacataattaaaaactttaacaaggaaggcacggatgaggtgttaaatgaataataaagtagtaaaggggtaaaattgtaaaataaagtaa  7043700                                                                                   --------->DAG2                                                                                 ---------->DOF2                                                                             --------->TOE1(3)                                                                           ------->TEIL             -                                                                           --------->GLK1(2)       --            <----------ID1          --------->MYB52(1)                    --------->ARR14(2)   <-----        --------->DAG2            --------->MYB46(3)                      <---------ARR14(2)  <------ ------->MYB52(1)               <-----------GT1                     --------->ANAC58         -------- -->AHL20(2)----------->GT1 --------->DAG2   --------->HSFB2a(2)    --------->ANAC58        --------- -->GT1---------->DOF2     ---------->DOF2   <---------HSFB2a(2)  --------->MYB52(1)    ---------->DOF2 ------>RVE1(1)     ----------->GT1------->GAMYB      --------->TOE1(2)   --------->ARR11(3)---------   atatcggagtaaaggggtcaaattgaaaataaagtaaccatcggtatcgagaagaacgtgagaaaataaaacggaagaacctgaaaaggcgaaagtgacg  7043800       --------->YAB1 --------->ANAC58 --------->ANAC58 -------->GLK1(1) -------->DOF2 ----ANAC46    <---------ARR14(2) -----------------TaNAC69(2)   --------->GLK1(2)                       ---------->DOF2 ->MYB52(1)    --------->GLK1(2)       <----------ID1       --------->AHL20(2)                  ----- -->TGA1       --------->ARR14(2)     <-----------------------TaNAC69(2)                        <---- -->HVH21      <-----------ARR10 --------->YAB1            ----------->TBP        --------->TOE2(3) *TSS   ggaaagccatcaaaacaaatctgtgcgagagagaatcaaaaacgaagaaaactcaaaaactataaaatccaaataaagcctaatccctaatttctctcat  7043900                                          ------>MYB46(1)                                          ------>MYB83                                      ----------->RAV1(1)                                      ------>NtERF2                                     <---------ALFIN1                        <---------AHL20(2)                                     --------->ANAC46                       <---------AHL20(1)                                    --------->MYB46(3)                      <---------AHL20(2)     --------->ARR14(2)           --------->ANAC46  --------->GLK1(2)       --------->AHL20(2)     <---------ARR14(2)        <-----------GT1     <---------GLK1(2)  --------->TOE2(3) ---->At4g35610              <-----------GT1--------->AHL20(2)      <-----------GT1 -----At4g35610       <---------MYB52(1)<---------MYB111(1)    <---------AHL20(2)   ctcccaaaattcgcttctctattcgtttttttttcacccccaccaaatatttagattctatcgatttttttttcttaattttttttttgtagtttcagta  7044000                                <---------YAB1                              <---------ICU4                                                      ---                             <---------YAB1                                       <------ZmHOX2a(2)                           <---------ICU4                             ===================HOX2a_HOX2a                           --------->YAB1             --------->HSFB2a(2)        <---------ARR11(3)                     <---------CCA1(2)                <---------HSFB2a(2)    ---------->DOF2 --------                   --------->YAB1                     --------->LBD16 ------>ZmHOX2a(1)      <-------                ------>ZmHOX2a(1)      --------->At4g35610           --------->TOE1(3)      <--------        <---------ANAC58  <---------YAB1    ------>NtERF2            --------->TOE2(3)    <---------ARR14(1)        <---------ANAC58--------->YAB1 <---------At4g35610         <---------YAB1--------->ARR11(3)   cttagaaattgcttcttcctctcatatcatcatcatcgttgagctctgccagtctccgagaacagaattatccttaaaaaaaagatcgaagcgaatcata  7044100                                                                                                <----                                                                                             <-------                                                                                       --------->ANAC55(2)                                                                                       ----------->GT1                                                                                     <-----------RAV1(2)              ------>NtERF2                                                      ------>ZmHOX2a(1)             <---------DEAR3(1)                                                 <---------------AGL15            --------->LBD16       ----------->GT1                               --------------->AGL15           <---------LBD16        <---------ZAT6               --------->ANAC58----------------->AG ------>MYB46(3)     <---------AHL20(2)                        --------->ANAC58<-----------------AG ->YAB1   <---------LBD16    <---------ANAC58              --------->ANAC58    <-----------------AGL1 --ICU4   <---------ANAC46   <---------AtLEC2              --------->ANAC58    ----------------->AGL1 -ATHB12 <---------LBD16     <---------ANAC58            ---------->DOF2  ----------------------->TaNAC69(2)   acaaacaaattttcgggggctatttttttttgcatggtgttattcatcgtgtccatagctaaagcaagcttcaattcgttttcctcttcaggtaatttat  7044200                                                      <---------AtMYB61                                               <---------ANAC46                                               <---------ANAC55(1)                                               --------->ANAC55(2)                                               <---------ANAC55(2)                          <---------ANAC46     <---------ANAC58                          <---------ANAC55(2)  --------->O2                          <---------ANAC58 --------->At4g35610         ----------->GT1  <---------ANAC55(1)  <---------ANAC58           <---------At5g28300    --------->YAB1        --------->ANAC55(2) <-------TEIL               <-----------GT1 <----------DOF2          <---------ANAC58 <---------At4g35610<---------At4g35610           <-------- -------GT1          --------->ATHB12      <---------ZAT2     --------->At4g35610        --------->ARR11(3) --AHL20(2)     <-----------GT1            --------->ZAT2     ----------->RAV1(2)        <---------ARR11(3)   actctttgataatgtaatttacacgattgcgtattagtctgtttcagctacgtgttttggtttcatctgaactatttacagtttttgagaagaactttga  7044300                                                               <---------AHL20(2)                                                              --------->YAB1                --------->GLK1(2)                             --------->AHL20(2)                <---------ARR14(2)               --------->DAG2--------->AHL20(1)     <---------ARR14(2)                         ---------->DOF2<---------AHL20(1)     --------->ARR14(2)                    <---------------AGL15 <---------At4g35610    <-------TEIL       --------------->AGL15 <---------LBD16--------->ARR14(2)        ----------------->AGL3    <---------AHL20(2)             << --DOF2     <------ZmHOX2a(2)   <---------At4g35610           <---------AHL20(2)               <-----   tttagcggattgggatcaaatctggattcattttcgctgattttgctaaataaagttagcgaaattatattttaaaaaaaacttagggtttgatgttctt  7044400  Previous    Next  AGI:  At5g20810.1    Description:  auxin-responsive protein, putative / small auxin up RNA (SAUR_B). similar to auxin-responsive protein-related [Arabidopsis thaliana] (TAIR:AT3G43120.1); similar to auxin-regulated protein [Phaseolus vulgaris] (GB:AAN65371.1); contains InterPro domain Auxin responsive SAUR protein (InterPro:IPR003676) Range:  from: 7043900    to: 7045713    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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