Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      <---------WRKY12                                                                   --------->DOF5.7(2)                                                                  --------->TOE1(3)                                                               <---------DOF5.7(2)                                                              <---------WRKY38(1)                                                            <-----------HVH21                               <---------RAP2.6(3)         --------->DREB2C(2)                               <-------GAMYB               --------->DEAR3(1)                              <---------ANAC46          <---------ALFIN1                              ----------->GT1          --------->MYB46(3)                           ------->GAMYB              ------>MYB83--------->TOE2(3)            ------                          <------------AtMYB77        ------>MYB46(1)                          <----- ------>RAV1(1)           --------->MYB46(3)        --------->DEAR3(1)                         <----- -->LBD16             <---------MYB59            --------->ANAC46 <-----------TGA1             ------ ->ANAC58            <---------At4g35610         <---------ALFIN1--------->ANAC46           <-------- ->ANAC46            --------->At4g35610   <---------MYB52(1)--------->DOF5.7(2)           <--------- ->ANAC58         --------->LBD16          --------->DOF5.7(2)<---------WRKY12  --------->TOE1(1) ->DEAR3(1)    ------>ZmHOX2a(1)<---------MYB52(1)  --------->AtMYB61<---------DOF5.7(2)   <--------- -LBD16 <---------ALFIN1--------->MYB52(1)<-------GAMYB<---------MYB55(2)       --------->TOE2(1)   acaattacccaaacctcctccgtagctaactgccgttaaatctccgttaacacacctcccaccgtcaacgtcaacgtctacctcgtagcacatcgtcagc  7040300                                            <---------ARR14(2)                                         <---------ANAC58                                         <---------ANAC58                        ----------->HVH21                                         --------->ANAC55(2)                     <---------SPL7      <-----------HVH21              <---------MYB52(1)                      <---------WRKY18(1)   <----------DOF2          --------->RAP2.6(3)                             ----------->HVH21 --->ZAT2                   <---------At5g28300                             --------->WRKY45 ----ZAT2                  --------->MYB52(1)                               --------->WRKY38(1) ----At4g35610             <-----------GT1  --------->ARR14(2)              --------->WRKY12 --->At4g35610 <---------MYB52(1) <------NtERF2  <---------MYB52(1)       <----------DOF2 -MYB52(1)    <-----------HVH21  ------>NtERF2<------------MYB.PH3(1)  <---------ARR11(1)    -------- --HVH21      <-----------TGA1  <---------ARR14(2)                 <------------AtMYB77<---------MYB52(1) --TGA1      --------->ANAC46   --------->ARR14(2)--------->ARR14(2)  <---------MYB52(1) <---------MYB46(3)   ttcccctttgtcactccgtcatcgcatattaacggctccgttttcgtaaccgtttccttcactcgtgcaaccgtttctttgaccggaccggttattgatt  7040400                                                               <---------AtLEC2                                                              <-------TEIL           <---------MYB46(3)                 <-------TEIL                               ------->MYC2            <---------YAB1               <---------GLK1(2)                            <-------MYC3          ------>ZmHOX2a(1)               --------->ARR14(2)                           <-------MYC2          ===================               <---------ARR14(2)                     --------->ANAC58 --------->ATERF1(1)        ----------->HVH21                             --------->ANAC46<---------ATERF1(1)           -    --------->HSFB2a(2)                <---------MYB52(1)   ------->MYC3    ------>NtERF2         ---    <---------HSFB2a(2)----------------->AGL3         --------->ANAC58<---------RAP2.6(3)         <-- ->ATHB12 --------->MYB52(1)         ----------->GT1--------->YAB1   --------->RAP2.6(2)<---------MYB46(3)   tcggttcgagacgaccggattcgttttcagatttagaaccggttaattcttctatcaagacacatgcatggccgtctccgactcctatggttgtgactct  7040500                                  <---------ARR14(2)                                  --------->ARR14(2)            <-----------HVH21  <------NtERF2           ----------->HVH21  ------>NtERF2                                                     -----         --------->At4g35610 <---------DEAR3(1)                                               <------         <---------At4g35610--------->RAP2.6(3)                                               ------>NtERF2         --------->ZAT2   --------->TGA1a                                                    --------        --------->GLK1(2) ----------->HVH21                                               --------->ANAC58       <---------GLK1(2)  <---------TGA1a                    <------NtERF2         --------->ARR14(2)    <---------HSFB2a(2)   <---------O2                       <---------------------WRI1   ------->GAMYB    --------->HSFB2a(2)   --------->O2                      ------>NtERF2          <---------ARR14(2)  ------>ZmHOX2a(1)   <-----------HVH21                    <---------DEAR3(1)   <---------ANAC46----- ======HOX2a_HOX2a <------NtERF2 --------->GLK1(1)        --------->ATERF1(1)   <---------ANAC58<---- ----->ZmHOX2a(2) ----------->RAV1(1)      <---------HSFB2a(2)                  <---------ANAC58----- ------>ARR14(2)--------->At4g35610        --------->HSFB2a(2)         --------->AtMYB61  --------->ANAC58 -------ARR14(2)<---------At4g35610<------ZmHOX2a(2)    --------->ETT(2)   --------->ZAT2 --------->ANAC46   gatcctccagaagctgacagcggcagtcacgacggcgatccatgtccagacgttgttgacgacggcgaaaacacctaagctagcgtattcaaacgccaac  7040600                                                                                       ---------->DOF2                                                                                 <---------MYB52(1)                                                                                <-------GAMYB ---->ANAC58                      <---------YAB1                               <---------DEAR3(2) ---ATERF1(1)        <---------DDF1--------->ATHB12                            ----------->GT1 ->DEAR3(1)--------->GLK1(2)     <----------DOF2          ---------->DOF2      <------MYB46(1) ---->ANAC46        --------->ETT(2)                    *TSS                   <------MYB83 -----ALFIN1        <---------ETT(2)       --------->ALFIN1      ----------->HVH21  <-----------TBP ---->ANAC58   ---------->DOF2------>ZmHOX2a(2)  <---------AHL20(2)<---------DOF5.7(2)<---------AHL20(2)   gcctctaatggagattccaaagtcgacatcgatctctttattgaagtgtgtataattttgcaaagaggtgaacgattcagtcggttatataaaggagaga  7040700                               --------->At4g35610      --------->DAG2                               <-------GAMYB          ---------->DOF2                              <-                              <---------MYB46(3)     <------ZmHOX2a(1)                             <-                             <xxxxxxxxxxxxxxxxsmallRNA(i)                                      <-----                 <---------GLK1(1)             <---------ANAC58                   --------->ALFIN1---      <-----------TBP      <-----------HVH21   <---------ANAC58     <---------MYB46(3)       ------->TEIL   ----------->GT1       --------->DEAR3(2)    <---------ANAC46   <---------MYB52(1)      <---------YAB1   gagaagggatatatagatgaaatctggaccgtcggatgaagagcaagttgagtgaggaaaggtaagccgttggatgaagagcaagtggaagtatgaatat  7040800                                                                                            -------->HAHB4      --------->At4g35610                                                                   ---------   <---------At4g35610               <---------ANAC46                                      <---------YAB1 <--------P                   <---------ANAC58      --------->LBD16                     <---------YAB1 -----MYB46(1)               --------->HSFC1(2)    <---------ANAC46       <-----------GT1--------->YAB1 -----MYB83                  <---------HSFC1(2)   <-------TEIL     ----------->GT1     --------->AHL20(2) ----ARR14(2)          ---------->DOF2      ---------->DOF2    ---------->DOF2------>ZmHOX2a(1) ------>MYB59--------->GLK1(2)<---------ANAC58    <-----------------------TaNAC69(2)   <---------AHL20(2)   ttggtagatgctgagaatcgagagcgaaagatgcttctgtcttgaagaaagatgcgcatatagcccaaagagttattctccttatggattttaataatag  7040900                                                               <---------ANAC46                                                               <---------ANAC58                                                         <---------TOE1(3)                                                         <---------TOE2(3)                                                         <---------ANAC46                                                         <---------YAB1                                                       --------->MYB52(1)                                                      <---------MYB52(1)                                                    <---------ANAC58                                                    --------->ANAC46                                                    <---------ANAC55(2)                                                    <---------ANAC58                                                <---------ANAC58                                                <---------ANAC58      <---------WRKY18(1)                                               <---------At4g35610   ----------->HVH21              -                                             <---------ZAT18   <---------ANAC58                    <-                                          <---------ANAC58  <---------MYB52(1)                   <---            --------->YAB1          <----------DOF2 --------->ANAC55(2)                        <-----            --------->TOE2(3) --------->ANAC46 --------->At4g35610 <---------AtLEC2         --------- >YAB1<-----------GT1 <----------DOF2     <---------ANAC58 <-------GAMYB       ----------->RAV1(1) --   aaaacatataacaaacttaatagactttcaatacgactctttgttcgtgtgcttacgttacggttgtgtgcatgaccgatacaacatttactaggtggag  7041000         --------------->AtSPL8         <---------------AtSPL3     --------->LBD16    --------->ANAC55(2)    <---------ANAC55(1)    <---------ANAC55(2)    <---------ANAC46    <---------ANAC58    <---------ANAC58                                                 --------->HSFB2a(2) ----------------------->TaNAC69(2)                           <---------AHL20(2) -------->KAN4(2)                       <-----------GT1      --------->AHL20(2) --------HSFB2a(1)  <---------------AGL15      --------->AHL20(2)--------->AHL20(2) ---ZmHOX2a(1)--------->REM1(1)       <---------YAB1         <---------AHL20(2) ----ANAC46  --------->SPL7       <---------DAG2           --------->YAB1     ----------->GT1 >ALFIN1 --------------->AtSPL3   <----------DOF2     <---------YAB1 <---------HSFB2a(2)    <-------- ------->HSFB2a(1)  --------------->AGL15      <---------AHL20(2)<---------AHL20(2)      --------->ALFIN1   gatgttccgtgttcgtacatcactaaatttagataactttattatcgatttaaattttgaatattaattttttagaagttgagttatataagtggtggaa  7041100                                     --------->AHL20(1)                               <------NtERF2                                     <---------AHL20(1)                              <---------DEAR3(2)                                   <---------ARR11(3)                               <---------DEAR3(1)                                   --------->ARR11(3)                              <---------ORA47(1)                                   --------->AHL20(1)                            <---------MYB46(3)                                   <---------AHL20(1)                            <------MYB83                         <---------MYB52(1)         <---------ZAT6               <------MYB46(1)                        <-------GAMYB--------->ARR11(3)                         --------->MYB111(2)                       <---------DEAR3(2)    --------->AHL20(2)                 --------->MYB111(1)                       <---------MYB46(3)    <---------AHL20(2)                 <---------AtMYB61                       --------->MYB55(2)  <---------------AGL15                --------->MYB55(2)                      <---------TOE2(2)    <----------DOF2                      <---------MYB46(3)                 <---------DOF5.7(2) <---------ARR11(3)                        <--------P           -                *TSS  <---------DEAR3(1)   --------------->AGL15             --------->ATHB12     <--      <---------YAB1------------>AtMYB77<---------AHL20(2)                   <---------MYB46(3)<----- -ANAC46     <---------ZAT6       --------->YAB1<---------YAB1           <---------AHL20(2)    <-----   aatcgcttattagtagtgtaaacgtcggttagacaaaaatattttcttttattagagatagattataaactagaattaatggttggtcggccaaattttt  7041200  Previous    Next  AGI:  At5g20790.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G43110.1) Range:  from: 7039913    to: 7040656    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g20800.1    Description:  transposable element gene. pseudogene, similar to putative reverse transcriptase, predicted non-LTR reverse ranscriptase sequence fragments; blastp match of 31% identity and 1.8e-59 P-value to GP|20279456|gb|AAM18736.1|AC092548_14|AC092548 putative reverse transcriptase {Oryza sativa (japonica cultivar-group)} Range:  from: 7041116    to: 7042678    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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