Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          <---------TOE2(3)                   <---------ANAC46                                                    ------->GAMYB >ANAC58           <---------ZAT6                                                     --------->MYB46(3) >ANAC46         <---------ANAC46                                                   <-----------GT1 < >MYB46(3)      <---------MYB52(1)                                               --------->TOE2(3)  - >bZIP60(2)    <-------GAMYB                    <----------DOF2                  --------->TOE1(3)  - >ANAC58      <-----------RAV1(1)   <-----------GT1  --------->ZAT6            --------->ICU4<-------   ctacaatttgttttctctgttgtgttaagaaataagtttcacagttttctctttaacaatagccacaattttgtttatgtcaacattaaccacattttat  7014300                --------->At4g35610         <---------ZAT18      <---------ANAC46      <---------ANAC58      <---------ANAC58                             <----------DOF2        <---------YAB1   <-----------RAV1(1)                          <-----------GT1         --------->YAB1 ---------ARR14(2)                          <---------AHL20(2)      --------->ICU4 -------->ARR14(2)                          --------->AHL20(2)     <---------AHL20(1)       --------- -------->GLK1(2)           --------->YAB1 --------->AHL20(2)  --------->ANAC46   ---------->DOF2 --AHL20(2)     <---------At4g35610     ----------->GT1<---------YAB1<---------ICU4     <---------YAB1   agtatctgtcgtgctcttagctaaggcgaagcatacttcaaaagattaaattactttctcattacacataatatttatgattttaaaagtattatcagca  7014400                                              <---------YAB1                                ---------                                            --------->ICU4   ------>MYB83            --------->YAB1                                       <---------ZAT6        ------>MYB46(1)        <-------TEIL   ------>ZmHOX2a(1)                   ----------->GT1     <---------MYB59       --------->ATHB12  <---------------AGL15    --------->AHL20(2)--------->AHL20(1)                 <---------YAB1      -  --------------->AGL15    <---------AHL20(2)<---------AHL20(1) --------->YAB1--------->YAB1--------- >YAB1                <----------DOF2----------->GT1<---------YAB1            <---------AtLEC2      <   ttctcctcatatagtactaaaattcttttttaatttggatagtgtaatatttttgtgattaccaaataatagatgttttagcatgattcataacaagaaa  7014500                                                                                     <---------ARR14(2)                                                                                     --------->ARR14(2)                                                                                <---------ARR14(2)                                                                <---------ETT(1)--------->ARR14(2)                                                                ----------->HVH21  ----------->HVH21                                                               --------->MYB46(3) ------>ZmHOX2a(2)                                                            ------->GAMYB <---------SPL7                                                           <---------MYB52(2)   <-----------ARR10                                                           --------->MYB46(3) --------->LBD16                                                         <---------DOF5.7(2) --------->LBD16                                                         --------->MYB52(1) <---------LBD16                                                      <------MYB46(1)----------->HVH21                                                      <------MYB83  --------->MYB46(3)                                                      --------->ANAC55(2)------->GAMYB                                                     --------->MYB46(2) --------->DEAR3(2)              <-----------GT1                        --------->MYB111(1)--------->SPL7 >ANAC58  --------->ATHB12            --------->ALFIN1<---------ANAC55(2)--------->DEAR3(1) -------->ARR11(3)                 --------->DAG2    --------->MYB59--------->DEAR3(2) >ANAC58 --------->ICU4           ---------->DOF2   <---------MYB55(1)  --------->MYB46(3)    <------ ---------ARR11(3)       --------->AHL20(2)       <-------GAMYB--------->DEAR3(2)<------ZmHOX2a(2)   aacatctcagaatgatttactaatctataaatttcagaaagtgtggcaagagggttaggtaacgacccgacccgaccgcccggatcggacccgtttaaga  7014600              <-----------HVH21             --------->LBD16               --------->YAB1           <---------LBD16                 --------->AHL20(2)         ------>MYB46(1)      <---------ZAT18         ------>MYB83        <<<<<<<ZML2  ----------->TBP         -------->P       <---------HSFB2a(2)       <---------MYB55(2) --------->HSFB2a(2)                               *TSS       --------->MYB46(3) --------->HSFC1(1)         <------ZmHOX2a(1)    <------------MYB.PH3(2) ---------->DOF2          >>>>>>>ZML2 ------------>CBF     --------->ANAC55(2)--------->ZAT6 ----ID1<---------ALFIN1  <---------HSFC1(1) ---------->DOF2              <---------MYB59      ------   caaaaaagacccacccggttagagcgttctagaacacttgggcaataaaaagagaggagtcatgtgttttagtctatctaactctctctctactgcaatt  7014700                ---------->DOF2                                                    <---------ALFIN1               --------->LBD16          <---------------AGL15                     ------>MYB83            ------>ZmHOX2a(1)           ------>ZmHOX2a(1)                         ------>MYB46(1)           --------->TOE1(2)           --------->ANAC46                          <---------ALFIN1        <-----------GT1                --------->TOE2(3)                        --------->MYB46(3)       <-----------GT1                 --------->TOE1(3)                      -------->P <---------TOE2(3)         <---------DAG2                                  --------->At4g35610 <---------TOE1(3)         --------->TOE2(3)                               <---------At4g35610 <----- --->ICU4  --------->TOE2(2)<----------DOF2         --------->YAB1     <----------DOF2         ------   tttagggttttatcctccgaaagtctcaacctttttcttatcctcaacaaggtatcatcactcactctcttctctttagctacccactccctctctcttc  7014800                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                              <------                                                                                             --------                                                                    --------->DAG2          ---------                       ------>ZmHOX2a(1)                           ---------->DOF2          <--------                       <----------DOF2                          <------NtERF2               ---------                      --------->TOE2(3)                       <---------ANAC46           --------->YAB1                  <---------GLK1(1)                          <---------LBD16    <---------ZAT18 <---- ----ZAT14        --------->GLK1(1)                     <----------DOF2         --------->ZAT18 <---- --->ZAT14 <---------YAB1                     <---------TOE2(3)<---------MYB46(3) --------->At4g35610   actgtctattcgtattatagaaatcctttacaacgagaattgaatacaaaggtttgaactttgggcggataaagtaatctagttcgctcaatagtggttg  7014900  <-----------GT1 ---MYB83 ------ANAC46                 <---------ARR11(3) ---MYB46(1)                  --------->ARR11(3) --P                         --------->GLK1(1) --------------->TaNAC69(2)  <---------GLK1(1) >MYB55(2)           --------->TOE1(2)                                                              < -MYB46(3)         --------->ARR14(2)                                                             --- >ATHB12           <---------ARR14(2)                                                      <---------ANAC46 --MYB46(1)        ------->TEIL          <-----------GT1                     <---------YAB1<---------ANAC58 --MYB83           --------->GLK1(2)  <---------ICU4  <-----------GT1  <-------TEIL        <---------ANAC58   ggttttactcttattttggtgaatctgggagaaatcttcatttttgcccatttgtttatctgtctctctcagtttcatactaattgagagtttgtgtgtt  7015000                     ------>NtERF2                     <---------ATERF1(1)                    <---------DEAR3(1)                    --------->DEAR3(1)                   --------->ORA47(2)                   --------->ATERF1(1)                   --------->RAP2.3(1)                   <------NtERF2                  <---------ERF1                  <---------ATERF1(1)                  <---------RRTF1(1)                  <---------DEAR4(2)                  ------>NtERF2                  <---------ORA47(2)                  <---------RAP2.3(1)                 <---------ANAC46                 <---------DREB2C(2)                 <---------RAP2.3(3)                 <---------RRTF1(3)                 --------->ATERF1(2)                 <---------RRTF1(2)                 <---------RAP2.3(2)        <------ZmHOX2a(1)    <---------ARR14(2)    --------->ARR14(2)         <---------At5g28300            --------->At4g35610 <---------ANAC46<---------RAP2.6(2)               <-----------HVH21           <------MYB46(1) ---------LBD16  <---------ATERF1(2)<-----------TGA1   <---------At4g35610     <------MYB83 -------->HVH21  <---------DEAR3(1) <-----------HVH21  <---------ZAT2         <---------AtMYB61 <----   ttgacggataggagaaatggcggcgactcaacttacagcgtcaccagtgactatgtcagcaaggagcttagcctcgctggatggtctcagagcttcgagt  7015100                                                      <---------ANAC58                                                      <-------GAMYB                                                      <---------ANAC58                                                     <---------MYB46(3)                                                     <------MYB46(1)                                                     <------MYB83                                                    <---------AtMYB61                                                  <---------MYB52(1)                                               <---------MYB52(1)                                              --------->LBD16             <-----------RAV1(1)                                             <XXXXXXXXXXXXXXXXXXXXXXXMIR829.1              <---------                                             <---------ANAC46             <---------MYB46(3)   <-----                                             <---------ANAC58           <-------GAMYB    <-------TEIL                                             <---------ANAC58          <-----------RAV1(1) <---------DAG2                      ----------->HVH21   --------->ARR14(2)   <---------At4g35610   <---------TOE2(3)                   <---------LBD16        <---------ARR14(2)   <---------ZAT2        <---------TOE1(3) -----ZAT6         --------->TOE1(2)     <---------ZAT2     ---------->DOF2        --------->STY1(1)   gtcaagttttcatctttgaaaccagggacccttagacagagccagttccgtcgtttggttgtcaaagctgcttctgttgttgcccctaaggtacttttct  7015200  Previous    Next  AGI:  At5g20710.1    Description:  BGAL7 (beta-galactosidase 7); beta-galactosidase. Identical to Beta-galactosidase 7 precursor (BGAL7) [Arabidopsis Thaliana] (GB:Q9SCV5;GB:Q94AU4); similar to BGAL8 (BETA-GALACTOSIDASE 8), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT2G28470.1); similar to BGAL1 (BETA GALACTOSIDASE 1), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT3G13750.1); similar to BGAL15 (beta-galactosidase 15), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT1G31740.1); similar to Beta-galactosidase precursor (Lactase) (GB:P49676); similar to unnamed protein product [Vitis vinifera] (GB:CAO65207.1); similar to beta-galactosidase [Mangifera indica] (GB:CAJ09 Range:  from: 7010524    to: 7014251    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g20720.1    Description:  CPN20 (CHAPERONIN 20); calmodulin binding. Identical to 20 kDa chaperonin, chloroplast precursor (CPN21) [Arabidopsis Thaliana] (GB:O65282;GB:Q9TNN2); similar to CPN10 (CHAPERONIN 10) [Arabidopsis thaliana] (TAIR:AT1G14980.1); similar to cp10-like protein [Gossypium hirsutum] (GB:AAM77651.1); contains InterPro domain Chaperonin Cpn10; (InterPro:IPR001476); contains InterPro domain GroES-like (InterPro:IPR011032); contains InterPro domain Chaperonin 21, chloroplast (InterPro:IPR017416) Range:  from: 7014676    to: 7016483    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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