Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <-------MYC3                              <---------ANAC46                             ------>MYB46(1)                             ------>MYB83                           --------->DEAR3(1)                          --------->MYB46(3)  <---------ALFIN1        <---------MYB52(2)              <---------ARR11(3) -------->CCA1(2)     <-----------HVH21                 ------->TEIL ------ZmHOX2a(2)    --------->ANAC58                <---------YAB1           <---------ANAC58 --------ARR11(3)    --------->bZIP60(2)           <---------ICU4             <---------ANAC58 ------->ARR11(3)    --------->ANAC58             --------->ICU4             <---------DEAR3(1) ------->ARR14(2)  <---------ANAC46         --------->TOE1(1)              <-----------HVH21 --------ARR14(2)  <---------ANAC58       <---------ALFIN1--------->ARR11(3) --------->SPL7 ------->AGP1      <---------ANAC58     ------>ZmHOX2a(1) <-----------ARR10<---------SPL7 ----GT1          <------NtERF2------->MYC3------>ZmHOX2a(1)    ------>ZmHOX2a(1)   agatccacttggtccatggtggcatgtcaccaacgtgtaatcctcctcgtccattatgaacatctcctcgtcttctccgtccgtgcttccaccatggctc  7006700                                   --------->ARR14(2)                            --------->MYB55(2)                            <---------MYB46(3)                            <------MYB83                           --------->MYB111(1)                           <---------------AtSPL3                           <---------AtMYB61                 --------->DEAR3(2)<---------ARR14(2)                 --------->RAP2.6(3)     <------ZmHOX2a(2)            <------ZmHOX2a(2)    <------MYB46(1)           <---------ARR14(2)    <------MYB83           <-----------ARR10<------MYB46(1)           --------->ARR14(2)   --------->MYB59           <-----------HVH21<---------DEAR3(2)                                         <------NtERF2         --------->LBD16  <--------P    --------->ARR14(2)                            <---------ATERF1(1)       <---------LBD16 <------NtERF2    <---------ARR14(2)                           <---------DEAR3(1)      ------->TEIL <---------SPL7<---------DEAR3(2)                           <---------HSFB2a(2) --------->At4g35610   --------->LBD16  --------->AGP1                        --------->HSFB2a(2)   atgaactgaaccggatcagaccggccgggttggttcggttccgatctacaaacgctcgtgattcgacgagtgtttgagttctcgagcgcggctacaatcc  7006800                                                                       <---------ARR14(2)                                                                       --------->ARR14(2)                                                           --------->ARR11(3)                   <---------GLK1(2)                       <---------ARR11(3)             ------>NtERF2                                <---------GLK1(1)           --------->MYB46(3)                             --------->GLK1(1)           <---------ZAT18       ------->GAMYB                       <---------At4g35610         --------->GLK1(2)            -     ------>MYB46(1)                       --------->At4g35610         --------->ARR11(3) <----------DOF2     ------>MYB83<---------YAB1  --------->GLK1(2)        --------->RVE1(1)          --------->ALFIN1    --------->MYB52(1)          <---------GLK1(2)        <---------ARR11(3)   <---------GLK1(1)     -    ----------->RAV1(1)       <---------TOE1(2)    <----------DOF2    <---------GLK1(2)--------------   --------->AtMYB61   <---------YAB1 <----------DOF2    --------->ARR11(3)   --------->GLK1(1)     -   ctagaccaacagagccaccaagattgtcatcgtagaatctctttgagctgtttctttgagatatctgagggagaatcttgaaatccagtgggcttttagg  7006900                                      <---------MYB46(3)                                     ------>ZmHOX2a(2)                                     ========================HOX2a_HOX2a                                   <---------ARR14(2)                                --------->ALFIN1                               --------->LBD16                              --------->DEAR3(1)                              <---------ANAC46                             --------->ATERF1(1)                             <------NtERF2                            <---------RAP2.6(3)                            ------>NtERF2                           --------->RAP2.3(2)                           --------->RAP2.3(3)                           --------->RRTF1(3)                           --------->RAP2.6(2)                           --------->DEAR3(1)                          --------->ORA47(2)                    <---------ARR11(3)                          --------->RRTF1(1)                   <---------GLK1(1)                          --------->DEAR3(2)                   --------->GLK1(1)                          <------NtERF2                        <---------CCA1(2)                          --------->MYB46(3)            --------->At4g35610                          --------->ERF1 ----------->HVH21    <---------MYB52(1)                          --------->DEAR4(2)            <---------ZAT2      --------->TOE1(2)                          --------->ATERF1(1)           --------->ZAT2<-----------------AGL1                          --------->RAP2.6(1)           <---------At4g35610--------->YAB1           <---------O2   --------->RAP2.3(1)           <---------GLK1(1)  --------->ATHB12           --------->O2   <---------ABI4(2)             --------->GLK1(1) <------ZmHOX2a(2)      <---------ICU4     <---------ATERF1(1)          <------ZmHOX2a(1)   <---------ATHB12         -- -------->ANAC58         --------->At4g35610        --------->ALFIN1  <-----------------AGL2      --- -------->bZIP60(2)     --------->ARR14(2)     --------->DEAR3(1)  <----------DOF2               ---- --------->TaNAC69(2)   <---------ARR14(2)    --------->DEAR3(2)--------->ARR11(3)       <----------DOF2 -------->ANAC58   ---------->DOF2 --------->ARR14(2) ===========================HOX2a_HOX2a     ----   gctcgtcatcaagacgtcgaagaaaggagccgccgtggatcggttgacaccgacgaggagctccgatatctttccgatcatgggatgggttcttttagta  7007000     ------>ZmHOX2a(2)   --------->ARR11(3)                                                                              <-   <---------ARR11(3)                                                                           <---- ------->YAB1             <---------YAB1----------->GT1                                       <------MYB46(1) ------>ICU4  <---------At4g35610     ------------------------>ANAC81  ---------->DOF2        <------MYB83 ----->ANAC58 --------->At4g35610   <---------AHL20(2)             --------->YAB1         --------->ATHB12 ----->ANAC58 <---------ZAT14      --------->AHL20(2)    ---------->DOF2      >>>>>>>>>TBF1  <-------   agcatgatcttgagagagcagagttttgatgatcagattaaatcgaaaaaacaaaaacaaaaagaagaaacataaaagaagaagaagagagaagattggt  7007100                                                                  <---------MYB46(3)                                                               <---------MYB46(3)                                                               <------MYB83                                                               <------MYB46(1)                                                              --------->MYB111(1)                                                              <---------MYB46(3)                                                              --------->MYB55(2)                                                              --------->MYB111(2)                 <--             <---------ALFIN1                                 <---------AtMYB61                   <-- --------ANAC46    *TSS                                       --------->ALFIN1                    === -----AtMYB61----------->RAV1(1)            ----------->GT1  <--------P                 <----------DOF2 --AtMYB61--------->AtMYB61  --------->CCA1(2)       <-----------RAV1(1)    <---------ANAC46---------   ggtgtttgtaaacctccacagagaagagaagagatgggagagagatgtgttatttatggtggagttggtgggagagttgagttgagaaccctttacacta  7007200                                       <---------YAB1                               ------->MYC3          <---------LBD16      <-------MYC3       <------------CBF       --------->ANAC55(2)      --------->ATHB12        <---------ANAC46      <---------ICU4          <---------TGA1a     <---------AHL20(2)       --------->TGA1a  <---------AHL20(2)          <---------O2 --------DOF2                 <---------ANAC55(2)                                                   - -------DAG2      <-----------GT1--------->ZAT18                                                    < =======================================bZIP_DOF                                                 <--- >ZAT6<---------AHL20(2)      --------->O2<---------YAB1              <---------CCA1(2)     ---------   ctttttatttattgcggtatttacaaaaaatcacgtgaactattcttatttcacgaataaaacccttactgtttatcttcaaaactaaactaaaccatag  7007300                      --------->ANAC58                 --------->ANAC46          --------->ANAC55(2)          --------->ANAC58          <---------ANAC58          ----------->GT1          --------->bZIP60(1)          <---------bZIP60(1)          --------->ANAC58          <---------ANAC58          --------->TGA2(1)          <---------TGA2(1)<---------ANAC58          <---------ANAC55(2)--------->ALFIN1                               ------->TEIL       ----------->TGA1    <---------ANAC46                        <---------YAB1--------->HSFB2a(2)  >>>>>>>>>RAP2.2--------->ANAC58                                  <---------AHL20(2) -------->ARR11(3)    --------->ANAC58                         <---------AHL20(2)<---------HSFB2a(2) ---------ARR11(3)    --------->ANAC46             --------->ARR11(3)    <---------YAB1 ------GLK1(2)   --------->ANAC58  <---------At4g35610<----------DOF2  --------->YAB1            <--- >TOE2(3)----------->STF1  <---------ANAC58        <---------ARR11(3) <---------YAB1             ====   aatatctaaatgacgtaacatgccacgaagcgtgtgaagctaattcaaatcgaaatcttttggattttttttattatgaacgtctagagagagagagtag  7007400                             --------->ANAC58                                              <---------WOX13(1)                      <---------YAB1                         <------MYB83                --------->ATHB12                <---------TOE1(2)                       <---------AHL20(2)               <---------AHL20(2)                --------->LBD16                       <---------AHL20(2)                --------->AHL20(2)                <---------TOE2(2)                     --------->AHL20(2)          <---------ARR11(3)             ------>ZmHOX2a(2)                     <---------AHL20(1)         <---------ANAC58       --------->At4g35610   --------->ANAC46      --------->AHL20(1)<---------ICU4     <---------AHL20(2)       <---------At4g35610   --------->ANAC58     --------->AHL20(2)<---------ATHB12------>ZmHOX2a(2) ---ZmHOX2a(1) <-----------RAV1(2)           ----------->GT1 <------MYB46(1)  <---------ANAC58    <-- ===================HOX2a_HOX2a            ----------->GT1  --------->MYB59   <---------ANAC46    <--   gagtagaatagctgatcccaggttattatccaaggaaaaacagaagagagaaatatataaatttggtctaatcagtagtgtcttgatctattaattgaat  7007500                                                                                                 <---                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                -----                                                                                            ---------                 <---------YAB1                                                            <---------YAB1                 <---------AHL20(2)                                                      --------->YAB1              --------->AHL20(1)                         <---------GLK1(2)              --------->ICU4      <---------TOE2(2)                                <---------YAB1                   <---------ARR14(2)      ------->TEIL--------->YAB1                    <---------YAB1                 --------->ANAC46   --------->ANAC55(2)                        <---------YAB1                       --------->ANAC58   <---------ANAC55(2)                      --------->YAB1                         --------->ANAC58 -------------AtSPL8     <-------TEIL      <---------ATHB51            ---------->DOF2  --------->ARR14(2) -------------AtSPL3<---------YAB1       --------->WOX13(1)----------->GT1     <---------WOX13(1)<---   gtagtacgtatgtaagtatattataagtacatgagtaagtcgtcaattatagttatgaagattgtcaaaatactaaagctaattgacgcaaatatgattt  7007600  Previous    Next  AGI:  At5g20700.1    Description:  senescence-associated protein-related. similar to senescence-associated protein-related [Arabidopsis thaliana] (TAIR:AT1G74940.1); similar to unknown [Populus trichocarpa] (GB:ABK92901.1); contains InterPro domain Protein of unknown function DUF581 (InterPro:IPR007650) Range:  from: 7005846    to: 7007119    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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