Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         <---------ICU4                                       --------->ATHB51                                       --------->AHL20(2)                                       <---------AHL20(2)                                      --------->ICU4                                    <---------ICU4                                   --------->ICU4                               --------->ARR11(3)     --------->YAB1                               <---------ARR11(3)  <---------HSFB2a(2)            ---------->DOF2   <                             <---------TOE2(3)     --------->HSFB2a(2) <-----------GT1             --   actggaaacctattcgatttgtccgaattttaagatactaattatttcagtttctataacagtgatgagacatttacctgttgaaaaagaaatagataga  7002100                                        <---------GLK1(2)                                      --------->AHL20(2)                                  --------->YAB1                                 <---------YAB1                              ------>ZmHOX2a(1)                             --------->TOE2(3)                           <------ZmHOX2a(2)                          <---------ARR14(3)                          --------->ARR11(3)                          <---------ARR11(3)                          --------->ARR14(2)                          <---------ARR14(2)                           <------ZmHOX2a(1)           <---------TOE2(3)------>ZmHOX2a(2)                 --------->ANAC58       <---------YAB1 -------TEIL              <---------GLK1(2)                   --------->ANAC58     --------->YAB1  <- ------->AtLEC2           --------->ARR14(3)  ---------->DOF2 --------->ANAC46  --------->YAB1-------   gatgcaaatgtataagattaaacttcaagatccttatcaaaaaattctcaaagctctcagaaacaagcaaataggattacaaaaattataacaaaaacac  7002200      <---------ANAC46                      ---------->DOF2      <---------ANAC58                     --------->YAB1                              ------------>CBF      <---------ANAC58                    <---------ATHB12                 --------->TOE2(3) --------YAB1                           --------->WOX13(1)    <----------DOF2     --------->MYB52(1) -->ZAT6      ---------->DOF2         ------------>CBF    ------>NtERF2    --------->TOE1(3)   tatttttggcttaaaaaaaagtctaaactttgacaactaattcaatcaaagaaaaaatgccaccctttccttctcaaccttcacaaacagacaatgtcca  7002300                                                                      --------->YAB1                                                                     <---------YAB1                                                                  <---------YAB1                                                                  --------->ICU4                                                                <---------ICU4                                                                --------->YAB1                 ------                    --------->TOE2(3)                           <--------HAHB4                 ------                    >>>>>>>>>RAP2.2         ------->GAMYB      --------->ICU4                  ------               ------------>CBF            --------->MYB46(3)  <---------YAB1                  ------              --------->YAB1               <---------MYB52(2)<---------ICU4                    <-----           ------->GAMYB            <---------DAG2           --------->YAB1                    ------          <---------MYB52(2)     <---------ALFIN1           <---------YAB1          ------>ZmHOX2a(1)          --------->MYB46(3)   --------->AtMYB61          --------->YAB1     <------------CBF  ------   aagtttggaacaacaaacacaatctaaacaaaaccacacctttcaacaaactatagagcatcatcatcattatcaaaaacattgtccttgttttaagacg  7002400                                                                      <---------ARR14(2)                                                                      --------->ARR14(2)                                                              <----------DOF2                                                            <---------At4g35610 --->ANAC46                                              --------->ZAT2 --->ANAC55(2)                    <---------GLK1(1)      <---------ZAT2  <---------LBD16 --->ANAC58               ---------->DOF2                --------->At4g35610 --->ANAC58           <----------ID1        ------------>CBF--------->At4g35610         ------>ZmHOX2a(1) ----ANAC55(2)      ---------->DOF2    ------>ZmHOX2a(1) <---------At4g35610     <----------DOF2    < --->ANAC55(1)  --------->ANAC58  --------->GLK1(1)     <-----------RAV1(1)--------->LBD16       ---- ----->GT1      --------->ANAC58 <-----------ARR10     <---------RAP2.6(2)--------->LBD16     ------>ZmHOX2a(1)   taacatcccaacaagaacaagaaaaagaaaaagagcatctcctctcttcaatccatggctgctgctgttctgaatcccggtttctttctcctcatcctcc  7002500                                                         <---------MYB46(3)                                                         ----------->GT1                                                        <---------DEAR3(1)                                                       <---------ZAT18                                                   <----------DOF2                                               --------->MYB46(3)                                              --------->SPL7                                <--------                                             <---------ARR14(2)                     --------->MYB52(1)    <----------DOF2                          --------->ARR14(2)                    ---------->DOF2 ---------CCA1(2)                       <---------ARR14(2)                   --------->ARR11(3) -->ZmHOX2a(1)        <----------DOF2   --------->ARR14(2)                   <---------ARR11(3)   <--   tcttatctttctcaatctccccttctttgcagtatgtgagcgagtccgaaccgcttgtgcggttcaaaaactcggtgaagataaccaaaggggacctaaa  7002600                                                                                        --------->TGA1a                                                                                        --------->ANAC58                                                                                        =============                                                                                        <---------TGA1a                                                                                        <---------O2                                                                                        --------->ANAC46                                                                                        --------->O2                                                                                        --------->ANAC58                                                                                      <---------ALFIN1                                                                                   ----------->HVH21                                                                                  <-----------TGA1                                                                                  <-----------HVH21                                                                                 <---------O2                                                                                 --------->bZIP60(2)                                                                                 --------->bZIP60(1)                                                                                 <---------TGA1a                                                                                 --------->O2                           --------->ALFIN1                                      --------->TGA1a                       <---------ZAT14                                           --------->ANAC58                       --------->ZAT14                                           --------->ANAC46                    <---------ANAC58                                ----------------------->TaNAC69(2)                    <---------ANAC58                              ================================MYC_MYB                   ------>ZmHOX2a(2)                    --------->DAG2           <---------ANAC55(2)                  <------ZmHOX2a(2)                   =====================================bZIP_DOF                 --------->ARR11(3)                   ============================================bZIP_DOF                 --------->ARR14(2)                   ---------->DOF2            <---------bZIP60(1)                 --------->AGP1                    ----------------->AG<-----------RAV1(2)                 <---------ARR11(3)                ----------------->AGL1        --------->ANAC55(2)                 <---------GLK1(2)           ------>ZmHOX2a(2)    =========================MYC_MYB                 <---------ARR14(2)         <------ZmHOX2a(2)     ------->GAMYB  --------->ANAC58 -MYB59        ----------->ARR10           <---------ARR11(3)    --------->ZAT6 <-----------STF1 -----TEIL ----------->HVH21               --------->ARR11(3)  --------->MYB52(1)--------->ANAC55(1)   ttcatggagagaagggacagatccttgcagtgggaaatggtttgggatctattgccaaaagggtctaacagtctcaggcattcacgtcacacgtctaggt  7002700                                 ------>ZmHOX2a(2)                                <------ZmHOX2a(2)                                --------->GLK1(1)                                <---------GLK1(1)                               --------->ARR14(2)                               --------->ARR14(3)                                        --------->LBD16                               <---------ARR11(3)                    --------->AtMYB61  --------->ANAC58               --------->LBD16 <---------ARR14(2)                  -------->P           --------->ANAC58            <---------At5g28300--------->ARR11(3)                 ------->GAMYB    <---------At4g35610           <---------ALFIN1   =============================HOX2a_HOX2a  <---------ALFIN1--------->LBD16       --------->MYB46(3)     <------ZmHOX2a(1)                  --------->MYB46(3)--------->At4g35610    ===================================HOX2a_HOX2a               <---------MYB111(2)   <---------LBD16    ====================================HOX2a_HOX2a      <---------ANAC58     --------->LBD16   <----    <------ZmHOX2a(1)     ---------->DOF2           <------ZmHOX2a(2)------->GAMYB ------>ZmHOX2a(1)  <---------TOE1(2)      <---------AHL20(2) ---------->DOF2----------->HVH21<---------LBD16 <-------- <---------LBD16     --------->ATHB12  <---------CCA1(2) <---------ANAC58------>ZmHOX2a(1)  --------- ====================================bZIP_DOF       ============================HOX2a_HOX2a<---------   ctctcaggaaccatcaccgtggatgatttaaaggatctcccaaatctaaagacgatcaggcttgacaacaacctcctctccggtcctctcccgcatttct  7002800                                                          ----------->TGA1                                                          ----------->HVH21                                                        <---------ANAC55(2)                                                        <---------ANAC58                                                        --------->ANAC55(2)                                                        <---------ANAC55(1)                                                        <---------ANAC58                                                       ==========================HOX2a_HOX2a                                                       <-------TEIL                                                       ------>ZmHOX2a(2)                                                      <------ZmHOX2a(2)                                                      ===========================HOX2a_HOX2a                                                      --------->CCA1(2)                                                     --------->ARR14(2)                                                     --------->AGP1                                                     <---------ARR11(3)                 --------->RVE1(1)                   --------->ARR11(3)     <---------ANAC58                                <---------ARR14(2)     <---------ANAC46                               --------->GLK1(1)                     --------->ANAC46     <---------ANAC58                              ----------->ARR10                      --------->ANAC58 ------DOF2     <---------ARR11(3)             --------->LBD16                            --------->ANAC58 -CCA1(2)       --------->ARR11(3)           <---------LBD16                      ---------->DOF2 >GLK1(1) <---------ANAC46              <---------GLK1(2)--------->LBD16       <-----------HVH21 -DOF2--------->LBD16             --------->MYB46(3)<---------GLK1(1)     <------ZmHOX2a(1)   ttaaactccgtggcctaaaatctctcatgctctctaacaacagcttctccggagagatccgtgacgattttttcaaggacatgtcaaagctcaagcgact  7002900                                                     --------->ANAC46                                                  <---------ZAT18                                                <---------At4g35610                                                --------->At4g35610            ----------->GT1                                                <---------ZAT2               ---------->DOF2                                            --------->ANAC46              --------->ANAC58                                            --------->ANAC55(2)           --------->AtLEC2                                     ------>ZmHOX2a(1)                    --------->ANAC58       --------->YAB1       <---------ARR14(2)  --------->ZAT2           ------->MYC3         -------       <---------ICU4       --------->ARR14(2) ------->TEIL              <-------MYC3       <--------      <---------YAB1        <-----------GT1 <---------ANAC55(2)   --------->At4g35610       XXXXXXXXX <---------ANAC58         --------->HSFC1(2)--------->ANAC58     <-----------ARR10         --------->MYB52(1) <---------ANAC58         <---------HSFC1(2)--------->ANAC58    <------ZmHOX2a(1)    <-----------GT1   atttcttgatcataacaagttcgagggaagtatcccttcctccattacgcagctccctcaactcgaggagcttcacatgcaaagtaataacctcaccgga  7003000  Previous    Next  AGI:  At5g20690.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G42880.1); similar to lrr transmembrane protein kinase [Olimarabidopsis pumila] (GB:ABA18095.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Tyr Range:  from: 7002455    to: 7004553    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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