Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              --------->YAB1         --------->YAB1                                ------>ZmHOX2a(1)        --------->ICU4                                --------->TOE2(3)      <---------ICU4                             <---------HSFC1(2)                       --------->AHL20(2)      --------->YAB1                             --------->HSFC1(2)               <---------AHL20(2)     <---------YAB1                             <---------ALFIN1               <---------GLK1(2)     --------->ICU4                    --------->AHL20(1)              <---------------AtSPL8  ------   --------->YAB1                      <---------AHL20(1)            <---------ICU4  <---------YAB1 ---------->GT1   ---------->DOF2      --------->ARR11(3)        --------->YAB1<---------ARR11(3) ->DOF2 <---------YAB1                 <---------ARR11(3)       ----------------->AGL3    <---------AHL20(2)   gagagtaataataataaaaacaaaggagtgatgaaattcaaaatattgggacacttcctcagagtaatcaaaaatggcacagattttatgaataaaataa  6981500                                              ---------->DOF2                                        <---------AHL20(1)                                        --------->AHL20(1)                      >>>>>>>>>MYB2                                        <---------AHL20(2)                <---------HSFB2a(2)       -       <------ZmHOX2a(1)                --------->AHL20(2)                --------->HSFB2a(2)       -   ---------->DOF2                ----------->GT1                 <---------ANAC58  ------>MYB83    < --->YAB1        --------->AHL20(2)  --------->YAB1               <---------ANAC58  ------>MYB46(1)--   gaatgaaaaggactgtttttaaaatagtagtagtagtagtaataaaataaaagtattgagagagagagacttgcctcgagaaaaccaatctctctctcga  6981600               <------NtERF2              --------->ABI4(1)              ------>NtERF2              <---------ATERF1(1)             --------->DEAR3(1)             <---------ATERF1(2)             --------->RAP2.3(3)             --------->RAP2.6(2)                                                   --------->MYB52(1)             --------->RAP2.3(2)                                          --------->MYB55(2)             --------->ANAC46                                             <---------MYB46(3)            --------->ERF1   --------->HSFB2a(2)                         --------->ALFIN1            --------->DEAR4(2)             <---------ARR14(2)            <---------AtMYB61            --------->RAP2.3(1)      <---------ARR14(2)                 <------NtERF2            --------->ORA47(2)       --------->GLK1(2)                  <-------GAMYB            --------->ATERF1(1)      --------->ARR14(2)                <---------DEAR4(2)           <---------ATERF1(1) --------->LBD16                        --------->ALFIN1          --------->ANAC46   --------------->AtSPL3                   <---------DREB2C(2) ---------->RAV1(2)       <---------ARR14(2)        <---------ANAC46  <---------DEAR3(1) -------->At4g35610       --------->ARR14(2)     <-----------RAV1(1) <---------ABI4(1) ---------At4g35610    <---------ANAC58    --------->ARR14(2)    <---------bZIP60(2)           ------ ------->GLK1(2)       <---------ANAC58    <---------GLK1(2)   <------ZmHOX2a(1)  ----------->HVH21   gcatctgaactctcgccgcctctctgcgtttcccgtacaaatctggatactctggtggagacttaggacgaggcggtggtagagacgacggagcaagaga  6981700                                                ------>NtERF2                                                ----------->RAV1(1)                                               ------->GAMYB                                               --------->DEAR3(1)                       <---------GLK1(2)       --------->DREB2C(2)                   --------->ZAT2              --------->ANAC46                   ----------->RAV1(2)        --------->ATERF1(1)                   <---------At4g35610        <------NtERF2                   --------->At4g35610        --------->RAP2.3(1)                   <---------ZAT2             --------->MYB46(3)                --------->ZAT2               --------->ABI4(1)                --------->At4g35610          ------>NtERF2                <---------At4g35610          <---------ATERF1(1)                <---------ZAT2              <---------ALFIN1            ----------->RAV1(1)          --------->ANAC46        --------->ANAC58               ------>ZmHOX2a(1)  <---------At4g35610        --------->ANAC46            ------>ZmHOX2a(1)     --------->At4g35610            --------->ALFIN1        --------->ANAC58   <----------DOF2  --------->DEAR3(1)      <---------LBD16    <---------ANAC58   ------->TEIL--------->ANAC46  ------>ZmHOX2a(1)<-----------RAV1(2)                  <---------ANAC58 --->CCA1(2)===================RAV <---------ALFIN1     <------ZmHOX2a(1)         <---------ANAC46   cgatgaactcactccaccagcagctgattcttttcctcctccttcgccaccgccagaaggagcagacattttcggagagaaatggtttggagtgtctcaa  6981800                                                                <---------ANAC46                                                               <------NtERF2                                                             <---------DEAR3(1)               ----------->GT1                              --------->At4g35610               <---------ZAT6        --------->ZAT18        <---------At4g35610                ------            <---------AtMYB61    <-----------------------TaNAC69(2)                           -------            --------->ALFIN1    <---------ZAT14             --------->ATERF1(1)        ---------->DOF2       --------->AtLEC2     <------ZmHOX2a(1)            <------ZmHOX2a(1)          --------->AtLEC2-   gagagaaacatgcagtggtgttattacttaggagagaagtgaaccagaagaagagaagaggaagcggcgagtgagtgagaaaaacaatgcaaagaagaaa  6981900                                                              <------NtERF2                                                              --------->At4g35610                                                              <---------At4g35610                                                           <------NtERF2                                                       --------->ALFIN1                                                       <------MYB46(1)                           <---                                                       <---------ANAC58                          ----                                                       <---------ANAC58                          <---                                                       <------MYB83----------->GT1               <---                                                      --------->MYB111(2)                      <-----                                                      --------->MYB46(2)        --------->At4g35610                                                      <---------DEAR3(1)        <---------At4g35610 -                                                      --------->MYB111(1)<---------ICU4       <------                                                      <---------MYB46(3) -------->HAHB4     <--------                          <---------ZAT14             --------->MYB55(2)<---------YAB1     <---------YAB1      ---------->DOF2<---------ANAC58                <---------MYB55(1) --------->ICU4   --------->YAB1 ------------------>ANAC81--------->ZAT14            --------->ALFIN1--------->AHL20(2)--------->ANAC58 --->DOF2            <---------ANAC58   <------ZmHOX2a(1)--------->ALFIN1--------->YAB1--------->ANAC58 --------->DOF2  --------->CCA1(2)   *TSS          <---------O2  <------ZmHOX2a(1)----------->HVH21<-   gaaaaagagaaagagagagagatgagtgtgtagtagtagagaggaagagagagaggtgggtggcagaggaagtaattatagcatctgacaaggattatta  6982000       ----------->RAV1(2)       --------->At4g35610       <---------At4g35610    ------>MYB83    ------>MYB46(1)  <---------MYB59                                              <---------AHL20(2) ------ANAC58              --------->LBD16                 <---------AHL20(2)                       - ----->ANAC55(2)          <---------ANAC46              <---------AHL20(1)                       ---- ------ANAC55(2)          <---------ANAC58              --------->AHL20(1)                       <--- ------ANAC58       <---------TOE1(3)                   <---------AHL20(2)              ----------->RAV1(1) ------GT1          <---------TOE2(3)                  --------->AHL20(2)              <----------ID1 ------->P     <----------DOF2                         <---------AHL20(2)      <---------AHL20(2)<--- ---YAB1  ------>NtERF2   <---------ANAC58       --------->TOE1(3)  <----------DOF2--------->AHL20(2) -ICU4 ------>ZmHOX2a(1) <------NtERF2           --------->TOE2(3) <---------ICU4  <---------AHL20(2) ----------GT1<---------DAG2        <---------MYB52(1) --------->YAB1      <----------DOF2     ------   cttaccttcctctgccccttttaaggctccgtgtctctgttttttttaaaaccttaattatatttttaatctttaggctttttatttaaacaacaaaaaa  6982100                                                                                  --------->ARR11(3)                                                                                <---------YAB1                                                                               xxxxxxxxxxxxxxxxxxxxxx                                                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                      --------->GLK1(2)                                                                      --------->ARR14(2)                                                                      <---------ARR14(2)      <xxxxxx                                                                      <---------ARR11(3)   <------MYB46(1)        <---------AHL20(2)                                           <---------ARR14(1)    ----------       --------->AHL20(2)                                <---------AHL20(2)   --------->YAB1  <xxxxxx   <---------YAB1                                        <---------AHL20(1)   <---------ICU4--------- -------->ICU4                 <---------ICU4            --------->AHL20(2) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) ----->AHL20(2)               <---------ATHB51          --------->AHL20(2)<---------YAB1  <xxxxxxxxxx ------AHL20(2)       ---------->DOF2                 --------->TOE2(3)  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) ------ATHB51    <----------DOF2<---------TOE2(3)   <---------AHL20(2)--------->ARR11(3)<---------AtLEC2 --->YAB1        <---------DAG2--------->YAB1<-----------GT1  <-----------GT1--------->ICU4<------MYB83   taattcttatttaatgcaactttttaaagacaataatgtttttttttttactaattcattaaatttacacagtatcttgattatgattttggatggtaaa  6982200                                              <---------ICU4                                              --------->ATHB51                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                    xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    <---------ZAT18 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    --------->ZAT18<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  --------->YAB1--------->ARR11(3)            --------->ATHB12                               -------- x>smallRNA(le3)<---------ARR11(3)           --------->ICU4                      --------->YAB1 xxxxxxxxxxxxxxxxxsmallRNA(le3)       <---------GLK1(1)                       --------->WOX13(1) ->GT1    <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <---------YAB1                  --------->AHL20(2) xxxxxxxxxxxxxxxxsmallRNA(le3)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    --------->AHL20(2) >At5g28300---------->DOF2   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)     ----------->GT1   ----------->GT1 xxxxxxxxxxxxsmallRNA(si3)  <-------TEIL  <---------YAB1      ---------->DOF2<---------AHL20(2)   acaatgagcacttaaaagtatctcaatagatgcaaaatggagttctcattattggttctcttaaaaaagagttgaaaaataaatcaaaatggattaaaag  6982300                                                                    ----------->GT1                                                                --------->ATHB12                                                               <---------YAB1                                                           <---------DAG2                                                           <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                           <---------ANAC58                                                           <---------ANAC58                                                      <---------ANAC58                             --                                                      <---------ANAC58                     --------->ANAC58                                                     <---------AtMYB61                     ----------                                                     --------->ALFIN1               <---------------AGL15      <---------ZAT2                               <---------ANAC46 <---------MYB46(3)   ---------->DOF2      --------->ZAT2 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)------>NtERF2              --------------->AGL15      <---------At4g35610                          <---------bZIP60(2)  --------->MYB52(2) --------->ANAC58      --------->At4g35610            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)        <-----------GT1 --- -->DOF2      <----------DOF2       --------->CCA1(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)--------->DAG2   agagagagagctgtctcttttgagagagtttttgagagagatgagagacgatgatgtggtgccttatcattggttaattgtttttaacaaaaaaagcaaa  6982400  Previous    Next  AGI:  At5g20635.1    Description:  receptor. similar to unnamed protein product [Vitis vinifera] (GB:CAO65235.1); contains InterPro domain Keratin, high sulphur B2 protein; (InterPro:IPR002494) Range:  from: 6979215    to: 6981937    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version