Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              ----------->GT1                                                                           <------ZmHOX2a(1)      ---                                                                        <------NtERF2     <------NtERF2                                                                      <---------DEAR3(1) ------>NtERF2                                <-----------ARR10                     <---------ANAC46 --------->RAP2.3(1)                                --------->GLK1(2)                    <---------LBD16  <---------ATERF1(1)                    --------->ARR14(2)                               <------NtERF2--------->ARR14(2)<                    <---------ARR14(2)                             <---------DEAR3(1)--------->ANAC46                   <------ZmHOX2a(1)     <-------GAMYB          <-----------RAV1(1) <---------LBD16 <                 <---------TOE2(3)    ------>ZmHOX2a(1)       <----------DOF2     <---------ARR14(2)< --->At4g35610 <xxxxxxxxxxxxxxxxsmallRNA(s)            --------->ANAC58 --------->ATERF1(1)   <------ ----At4g35610------>ZmHOX2a(1)<---------GLK1(2)       --------->ANAC58--------->LBD16--------->LBD16   tgaaaatgaagaagtccttgaggaaacaccatagaatctcctctgttgagagtcttcaagtaaactttgttggcggaggagataaatccggcgcaaatgg  6975600                                                                --------->LBD16                                                               --------->DREB2C(2)                                                               --------->DEAR3(1)                                                              <xxxxxxxxxxxxxxxxsmallRNA(s)                                                             --------->MYB52(1)                                                            --------->DEAR3(1)            --------->ANAC46                                                            --------->AtMYB61             --------->ANAC58                                        <---------ZAT14     <---------ALFIN1              --------->ANAC58                                       --------->ALFIN1    <---------MYB55(2)           --------->ARR14(1)              --------->ANAC46       <---------ANAC58    <---------ALFIN1               --------->CCA1(2)              --------->ANAC58       <---------ANAC58   --------->MYB46(3)             --------->ARR14(2)     <---------WOX13(1)  --------->ANAC58             <---------bZIP60(1)              --------->ARR11(1) --->NtERF2<---------REM1(2)----------->RAV1(1) <xxxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<-------TEIL ---------ANAC46         --------->ANAC58--------->ALFIN1--------->AtMYB61             <---------ARR14(2) ---------ANAC58       --------->At4g35610--------->REM1(2)--------->MYB46(3)        ----------->ARR10 ---------ANAC58<------ZmHOX2a(1)<------ZmHOX2a(1)    --------->bZIP60(1)      --------->ANAC58 -----RAV1(1) --------->ANAC58<-----------RAV1(2)  ----------->HVH21           --------->ANAC58   tgccttgaatgactacaaggacctcagaagcaccaggatgagtgtggagagggatgacaccaccaccggctaagtcaagacgagccagagatacgccaag  6975700                                                   --------->YAB1                    <---------MYB52(1)                                                  --------->ICU4                  <------------------                                                 <---------TOE2(3)               ------>NtERF2                    <------ZmHOX2a(1)           --------->YAB1               <---------bZIP60(2)                --------->At4g35610          <----------DOF2          --------->At4g35610           <---------ANAC58               ------>NtERF2               <---------At4g35610           <---------ANAC58              <---------RAP2.6(2)          ----------->RAV1(2)           <---------ANAC46             <---------LBD16               --------->ZAT2 --------->At5g28300       <---------ANAC58                <-----------RAV1(1)            <---------ZAT2----------->GT1       <---------ANAC58              <---------At5g28300      --------->ALFIN1------>NtERF2  --------   gccattgatgcctgcgtaagcaggagcaaaggctggagtcactgcggctttaatgatgttggaagtgtttccagctgtgccgaggccggtaaatgcaaag  6975800                       <---------ANAC58                           <---------At4g35610                       <---------ANAC58                           --------->At4g35610              <-----------HVH21                                   <---------ZAT2          <---------ANAC58                                      <---------WRKY12          <---------ANAC58                    <----------DOF2 <-----------HVH21       ----------->HVH21            ----------->RAV1(2)  <----------DOF2                            < ---WRI1  <---------ANAC46        <---------ARR14(2) <---------ARR14(2)   ---------->DOF2         --- -->DOF2  <---------bZIP60(2)     <-----------GT1   <------ZmHOX2a(1)   --------->ANAC46     --------   tcattttcggtgacttggtcagggttcttgcaagagtaacctgatgggctttgaggaccctttgggtcagctacacaaaagtcttgaacagaggcaaaag  6975900  <-------GAMYB ----------->GT1 <---------MYB46(3)     ----------->GT1                                        <----------DOF2 ---------AtMYB61 --------->ICU4                                            <---------ARR11(3) ------>CCA1(2) --------->At4g35610     --------->YAB1                      --------->ARR11(3) *TSS -->DOF2        <---------At4g35610    <---------YAB1 <----------DOF2   --------->CCA1(2)  --------->CCA1(2)   agatggttgaaatgagggagatgatgaagaaaatttggattatcatcttcatttttctttagaatgttttatagataagagcttttgttgaagttatgag  6976000                                                      <---------ANAC58                                                      <---------ANAC58                                                     <---------TOE1(3)                                                    <---------DOF5.7(2)                                                  --------->DOF5.7(2)     --------->WOX13(1)                                        <------------CBF                ------------>CBF                                      --------->ARR11(3)               --------->ANAC58                                      --------->ARR14(2)        --------->ARR11(3)                                      --------->ARR14(3)       <------MYB83                                      <---------ARR14(3)       <------MYB46(1)                                      <---------ARR11(3)      <---------AtMYB61              <-------                    <-----------TBP   <---------ARR14(2)    <------ZmHOX2a(1)         <---------At4g35610 ---------->DOF2----------->GT1     ----------->ARR10<---------TOE2(3) --------->ANAC58      --------   gcagaaagagaggcagtctggtttatatagagactgagaagatattgatatggttaacgtgaggatggtcttgaagcaatctagaggcatcttatttttt  6976100                                   ----------->GT1                                <---------ANAC58                                <---------TGA1a                                --------->TGA1a         --------->ATHB12                                =================================bZIP_DOF                                <---------ANAC46       ----------->HVH21                                =================================bZIP_DOF                                <---------ANAC58      <----------DOF2                               --------->SPL7    <-------MYC3                               <-------TEIL      ------->MYC3                               ------->TEIL     --------->O2                             <---------SPL7     <---------O2                             --------->TOE1(2)  --------->TGA1a                  <----------DOF2--------->TOE1(2)   <---------ANAC46                  ========================bZIP_DOF   <---------ANAC58                  ========================bZIP_DOF   <---------ANAC58          ------->TEIL <---------------AtSPL3   =================bZIP_DOF   <---------ARR11(3)      <     <---------ANAC58 <---------ANAC46          <---------TGA1a             <---------GLK1(2)       -     <---------AtLEC2 <---------ANAC58          =================bZIP_DOF   --------->ARR11(3)    ---     <---------ANAC58 <---------ANAC58          --------->PIF3(3)          <---------RVE1(1)      --- --AHL20(2) <-------MYC3   ------->TEIL       <---------ALFIN1       <-----------HVH21    <---------ANAC46 ->AHL20(2) ------->MYC3 <---------SPL7    --------->ANAC46     <----------DOF2          <---------LBD16   tagcattgcatgcatgtgaactttgggtgtacgtacgtgggaaaaaccccacatggcttgatggggcttcatgtcagagatttttgtcagtttcggagaa  6976200           <-------TEIL   <---------YAB1                                                              <-----------GT1 ---------YAB1                                                                <---------ATHB12 ---------->GT1                                                               --------->MYB46(3) ------>YAB1--------->MYB52(2)                                     ----------->GT1                <-- -------->GT1             ----------->GT1                          <---------ZAT6   <-----------RAV1(1)   tggtgataaatggttcgttttcaataagatgtaaaaaatgcttaagaaagttttattctactggcacaagtgtaaaactaatcaccctgttgcattcaaa  6976300                               <---------DAG2                               <----------DOF2                                 <------MYB46(1)                      <------ZmHOX2a(1)                                        <------MYB83 <--------                    --------->MYB59                                            ----------->GT1   <--- --------DOF2 ---------->DOF2 --------->TOE2(3)     <-------TEIL        ---------->DOF2    <---------YAB1   cttttagagttttatccaaagttaggaagtcacctttatcaagagagaatgaaattcatgtcaaaatcgtttagcaaaggaaggttattgaacatcatta  6976400             --------->ANAC46             --------->ANAC58             --------->ANAC58                                                        <---------AHL20(2)          <---------SPL7                           <---------WOX13(1)               --------->AHL20(2)         <----------DOF2                       ------->GAMYB                    <---------DAG2        <---------------AtSPL3              --------->MYB52(1)                  <----------DOF2  ---------->DOF2                        --------->ANAC58                    ---------->ID1 <---------ATHB12      <----------DOF2   --------->ANAC46                 --------------->AtSPL8 -ICU4  --------------->AtSPL8           --------->ANAC58          <---------GLK1(2)<---------AHL20(2) ------YAB1 --------->SPL7             ---------->DOF2<---------TOE2(3)<---------AHL20(2)   ---------   ccaatgaagcgctgtacgacaatgactttgtaaactcttgtgaaagcaacgggattgacgttatatatagaatttttttgtgctttttaaattgcaacaa  6976500  Previous    Next  AGI:  At5g20630.1    Description:  GLP3 (GERMIN-LIKE PROTEIN 3); manganese ion binding / metal ion binding / nutrient reservoir. Identical to Germin-like protein subfamily 3 member 3 precursor (GER3) [Arabidopsis Thaliana] (GB:P94072;GB:P94028); similar to GLP1 (GERMIN-LIKE PROTEIN 1), manganese ion binding / metal ion binding / nutrient reservoir [Arabidopsis thaliana] (TAIR:AT1G72610.1); similar to Germin-like protein 1 precursor (GB:P45854); contains InterPro domain RmlC-like jelly roll fold (InterPro:IPR014710); contains InterPro domain Cupin 1; (InterPro:IPR006045); contains InterPro domain Germin; (InterPro:IPR001929); contains InterPro domain Cupin, RmlC-type (InterPro Range:  from: 6975106    to: 6975995    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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