Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         ------>MYB83       ------>MYB46(1)     --------->TOE1(2)                                                                    <-------TEIL ------->ANAC58                                                                        <---------At4g35610 ------->ANAC58                                               --------->GLK1(1)        --------->ZAT2 ->AHL20(1)                                     ---------->DOF2                        <---------ZAT2 --AHL20(1)            --------->ALFIN1        <---------ATHB12                        --------->At4g35610 --ARR11(3) --------->YAB1              <------ZmHOX2a(1)----------->GT1             <------ZmHOX2a(1)   caagaaacctacaattacaaaaacagtggcgaaactagatgaggagccaataaagaatatagtgaaatctacaaatacaagaatgtaggagctgcattat  6962400                                                                                           --------->MYB52(1)                                                                                          --------->TOE1(2)                                                                                         --------->MYB46(3)                                                                                --------->ZAT2                                                                                --------->At4g35610                                                XXXXXXXXXXXXXXXXXXXX>MIR3932A/B <---------At4g35610                <---------YAB1            --------->MYB46(3)       ----------->GT1       <---------MYB52(2)  --------->TOE2(3)                ---------->DOF2       <----------ID1         <---------ZAT2  --------->TOE1(3)   <---------TOE2(3)<----------ID1  --------->YAB1        --------->LBD16    <----   tcaaccttgaaacaagtgatttttgagattagggaccaaaaggaacaaactttgaaataagaacaaaactcgaaaaatccagagctcagaaacaaacgat  6962500                                                            ----------->HVH21                                                      <---------LBD16                                                    ----------->HVH21                                                    --------->WRKY12                                                    --------->ETT(2)                                                    <---------ETT(2)                   <---------ATHB12                 --------->DEAR3(1)              --------->WRKY12                 --------->WOX13(1)                 <---------DEAR3(1)              --------->WRKY38(1)           <----------DOF2<---------At4g35610       <---------WRKY12              <-------GAMYB         <---------HSFC1(2)                       <-----------HVH21              --------->MYB52(2)         --------->HSFC1(2)                       --------->LBD16                <---------MYB46(3)        ------->TEIL      --------->At4g35610    <---------ANAC46   ---------->DOF2<---------MYB52(1)     --------->ANAC46--------->WOX13(1)   <---------ANAC58 <---------WOX13(1)    ------>ZmHOX2a(2)  < --ZmHOX2a(2)----------->GT1              <---------ANAC58--------->ARR14(2)<------NtERF2           <   cgaaatcacgaagctttgtaaatcaatgagcttacatagcattgtcttgctccgtcgacggattgacagaagaagcgcgtcgatcgttggccattttggt  6962600               <---------TOE1(2)               <---------TOE2(2)   <-----------ARR10                                                                        <--------   --------->ARR11(3)                                                                      <-------TEIL   <---------ARR11(3)                                                          <-------GAMYB---------   --------->ARR14(2)             ------->TEIL                               <---------TOE1(3)   <---------ARR14(2)   ----------->TGA1            <------MYB46(1)          <---------TOE2(3)<------  <---------CCA1(2)     ----------->HVH21           <------MYB83   <---------ANAC46      <---------ARR14(2)  <---------GLK1(1)   <---------ANAC58           <---------ANAC58  <---------AtLEC2      --------->ARR14(2) ---------ANAC58      <---------ANAC58           <---------ANAC46  <---------ANAC58      <---------GLK1(2) ---------ANAC58<-----------RAV1(1)              <---------ANAC58  <---------ANAC58   --------->YAB1   ttgggtatcttctctcgtatgttggagtgacgactgtatgtaatctcagaggcttggtaaggggtttttgcttgaaattagggttgaatcagattcgttg  6962700                                                                            <------ZmHOX2a(1)                                                                        ---------->DOF2                                                                       --------->YAB1    <------MYB46(1)                                                                      <---------ATHB12   <------MYB83  <---------ARR14(2)                                          <---------ATHB12       --------->ATHB12  --------->ARR14(2)                           <---------ARR11(3)   --------->WOX13(1)  --------->MYB59 -MYB46(3) --------->CCA1(2)                  <---------GLK1(1) --------->WOX13(1)  --------->ICU4 >MYB52(2)<---------ARR14(2)          --------->ICU4    --------->At5g28300 --------->ATHB12  <------ ---MYB52(1)                     --------->YAB1--------->ARR11(3) <---------ATHB12  <---------HSFB2a(1)   ctccaatctggagatttgagagatgtgaagagcaagcgtaagaattagaaatcttcactgtgaaatcaatcaatcaaaggattggaatgtttggttctga  6962800                                                  <------MYB46(1)                                                  <------MYB83                                                <---------WOX13(1)                                               <------------CBF                                              --------->ATHB12                                             <---------YAB1                                            <---------ANAC46                                     <---------At5g28300                                   ----------->HVH21                       <---------ATHB12  <---------MYB52(1)                                       <--      *TSS             ------------>CBF <-------GAMYB                 --------->AHL20(2)        <----  --------->ZAT14 -------->P---------->DOF2<---------At4g35610        --------->YAB1     ------->TEIL ---YAB1        --------->MYB46(3)<-----------HVH21              ------------>CBF --------->AHL20(2)   tttgtgaagtctctctgaacaaccagtcaataacgctgtcaccgttgctgattggtctaaatttttaaacaattaaaaccaaaaaaaaatgaatttttct  6962900                             --------->YAB1                             <---------ICU4                            <---------KAN4(1)                            --------->KAN4(1)                   <---------YAB1               <---------DAG2--------->KAN4(2)               --------->TOE2(3)                                   <---------YAB1     <----------DOF2<---------AHL20(2)     <---------GLK1(1)     --------->YAB1                ------ ----------CBF --------->TOE1(3)   <----------DOF2              <---------YAB1 <-----------GT1<------ -----YAB1   ------->TEIL  <---------KAN4(2)     ---------->DOF2<---------ATHB12 --------->ANAC46   tattggtctttggtgaaccttattaatcgaataatcgctatttggaactcttaaagacacatacttatcattcttcaatataaacgacattgctaagaat  6963000                                        --------->ATHB12                                        <---------ICU4                                        --------->ATHB51                                       <---------YAB1                                       --------->ICU4                                      --------------->AGL15                                     <-----------------AGL3                                    <---------AHL20(2)                                <---------ICU4                                --------->ATHB51                               --------->ICU4                     ----------->GT1                               <---------YAB1                   <---------ANAC58                             <---------ICU4                     <---------ANAC58                             <--------HAHB4               <----------DOF2          ==================         --------->ETT(1)    --------->YAB1       --------->TOE2(3)      --------->AHL20(2) --->GLK1(2)                --------->ICU4   <------MYB46(1)    <---------ANAC46   <----------DOF2 ---GLK1(2)                 <---------ATHB12 <------MYB83 ------>ZmHOX2a(1)     <---------YAB1   ctacaaacttgtcggaacacatagttttccatcattatttcattatttggtttcttaatccttttttcgtgtaaattatatcatgctttctacatagatg  6963100             <-----------GT1         <---------AHL20(2)         --------->AHL20(2)         --------->AHL20(1)                    --------->TOE2(3)         <---------AHL20(1)      <---------ARR11(3)         <---------ARR11(3)      --------->ARR11(3)         --------->ARR11(3)--------->CCA1(2)  >>>>>>>>>MYB98            <-----------GT1   ----------->GT1  --------->TGA1a         ------>ZmHOX2a(1)     ------>ZmHOX2a(2)   --------->YAB1   ===========================bZIP_DOF  <---------AHL20(2)  --------->DAG2    <---------TGA1a         =============================HOX2a_HOX2a =============================bZIP_DOF     <---------MYB59        <---------MYB46(3) ---------->DOF2  <---------ALFIN1  <----------DOF2  --------->YAB1<-------GAMYB     <----------DOF2 =============================bZIP_DOF  <-----------GT1  --------->AHL20(2)         --------->YAB1   agcaaaagtaatatatttccacacttgtgatatgagaacttttatcctaacttaaacataaaaatggatcgttgtaacttaatctatctttattcttttg  6963200                                          ------>ZmHOX2a(2)                                         <------ZmHOX2a(2)                                        --------->AGP1                                        <---------ARR11(3)                                        --------->ARR14(2)                                        <---------ARR14(2)                                        <---------AGP1                                        <-----------ARR10                                 ---------->DOF2                               <---------------AGL15                               ======================================================================                           <---------MYB52(1) <---------ALFIN1                         <---------ICU4 --------->ARR11(3)                      --------->YAB1   <---------CCA1(2)                                <-------TEIL  --------->YAB1 <-------TEIL <---------YAB1  --------->ZAT6                        <---------YAB1   acaaggataatcaatttgattcattcatcgttactataagcagatctaacactcccatactaaacatttgtacatagagtttagttttgatacatttcat  6963300  Previous    Next  AGI:  At5g20580.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G06005.1); similar to unknown [Populus trichocarpa] (GB:ABK93352.1); contains InterPro domain Prefoldin (InterPro:IPR009053) Range:  from: 6958630    to: 6962806    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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