Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          --------->AtMYB61              ------>MYB83              ------>MYB46(1)              --------->MYB52(1)             --------->MYB55(1)            <---------MYB46(2)            <---------MYB59            <---------MYB111(1)           <---------ANAC55(2)                --------->YAB1           --------->ANAC55(2)       ----------->GT1  --------->ZAT6    ------->GAMYB   <-----------------------TaNAC69(2) --------->HVH21   --------->MYB46(3)--------->ANAC58                                 <---------ATHB12 ------->RAV1(2)   <---------MYB52(2)--------->ANAC58            <---------ICU4     --------->WOX13(1)   cctgacactcgatacctaacaacaaaccaaaacacaaaaacgaaataagcataaacattcaacatcatcgttacaaattccaaaatcaatcgattgtttt  6957900                                                                --------->AtMYB61                  <---------bZIP60(2)                           ------->GAMYB                  <---------ANAC46                             --------->MYB46(3)            <-------TEIL                                      --------->ANAC58          --------->YAB1           <------ZmHOX2a(2)                                  --------->ANAC58     <---------ATHB12           --------->CCA1(2)                           --------->ARR14(2)        --------->WOX13(1)          --------->ARR14(2)       --------->ZAT18     <---------ARR14(2)      <---------ATHB12          <---------ARR14(2)      ------>ZmHOX2a(2)    --------->ARR11(3)    --------->WOX13(1)          <---------ARR11(3)     <------ZmHOX2a(2)     <---------ARR11(3)  <------ZmHOX2a(2)        <          --------->ARR11(3)    --------->ARR14(2)    --------->GLK1(1)   <---------ARR11(3)        <          --------->AGP1        <---------ARR14(2)    <---------GLK1(1)   --------->ARR11(3)     <---      ---------->DOF2       <---------At4g35610 --------->MYB46(3)    ---------->DOF2   --------->AHL20(2)   aagacttacaaagatccatgatgtggtttctgcagatcgcacagttgtcaacaacgatatctgcaaccaaaacaaagatcaatcaatcaataaaactctt  6958000                                                                       <---------GLK1(1)                                                                      <---------GLK1(2)                                                                      <---------ARR11(3)                                                                      --------->ARR11(3)    --------->MYB46(3)                                                --------->ARR14(2)  ------>MYB83                                                        <---------ARR14(2)  ------>MYB46(1)                                                    <------ZmHOX2a(1)  --------->ANAC58  --------->MYB52(1)                --------->HSFC1(2)             <---------TOE2(3)    --------->ANAC58 ---------MYB46(2)     --------->ZAT6     ---------->DOF2    <---------ANAC46   --------->ARR14(2) ---------MYB59   ----------->GT1   <---------HSFC1(2)   <---------ARR11(3)     <---------ARR14(2) --------GT1 <-----------GT1   <---------------------WRI1--------->ARR11(3)  <---------TOE2(3)      -   aacctaaccaaaaattaacatcgtaacacaaacatcgaaacatcgaaagaccaattgaagatagtgtataaggattttcgaggttaccccaagcccagag  6958100                                                                                          <---------ICU4                                                                         <---------HSFB2a(1)                                                                  --------->At4g35610     --------->YAB1                                                                  <---------At4g35610    --------->ICU4                                                                  <---------ZAT2      <------ZmHOX2a(1)                                                               <---------At4g35610<---------MYB52(1)                                                           --------->ARR14(2)    --------->LBD16  ---                                                           <---------ARR14(2)    ------>NtERF2    ===          <---------ALFIN1                                <------NtERF2  --------->HSFC1(2)       <--      ------>NtERF2                                   <---------O2--------->ZAT2--------->ANAC46  <--   ------->GAMYB                       <---------ANAC58  <---------ATERF1(1)   <---------LBD16    ---  <---------DEAR3(1)                   <---------ANAC58------>NtERF2     <---------HSFC1(2)     <---- -------->MYB52(1)                  <----------DOF2   <---------bZIP60(2)--------->HSFB2a(1)<--------   agcaacggcgctccacttcttaatttcgaatcgcttagctttcttgttggaagacgacgcggctacgctgctggaggcttctccggcaggaatcatggta  6958200   <------NtERF2 <---------DEAR3(1) ------>O2                                                                               <---------At4g35610 ============================================bZIP_DOF                                 <-----------HVH21 -------TGA1a                                 <-----------GT1----------->GT1         <-----------RAV1(1) -------O2                          ----------->GT1          --------->LBD16       <---------At4g35610 ------>TGA1a                     ---------->DOF2          <---------LBD16         --------->ZAT2   < -----DOF5.7(2)            ----------->HVH21<---------AHL20(2)<------NtERF2        --------->At4g35610 -YAB1          <------NtERF2  ------>ZmHOX2a(2)       ---------->DOF2     <---------TOE2(3)     <---   acgtcggagtctagagtcgccattaatctctgatcggaaagaaaatttaaaccctagaaaagccggagaaaaatatcaacgtttgagctgtcgctgattt  6958300                                                <----------DOF2      --------->ZAT18                                              --------->ZAT2    --------->ZAT14                <-----                                              --------->At4g35610    <---------ZAT18          -------                                         --------->DAG2         <---------ZAT14              --------                                   --------->CCA1(2)       <---------ANAC58                  --------                                  <---------ARR11(3)       <---------AtLEC2              <---------GLK1(1)             *TSS                 --------->ARR11(3)       <---------ANAC58 <---------ANAC58 -------- ---------REM1(1)       >>>>>>>>>TBF1   ---------->DOF2    <---------ANAC46 <---------ANAC58<-------- --------RAV1(1)    <------ZmHOX2a(1)<-----------TBP   <----------DOF2   <----------DOF2<---------GLK1(2)   tgttgtagagagagattgtagaggaagaagaagagagatatataaagcagctttgggctttgcctgtatagtgggctttcgtcggaattagattcccgta  6958400                                                                            <----------DOF2                                                                           --------->TOE2(3)                                                                         <-----------GT1                                                                        <-----------GT1                                                                      <---------ICU4                                                                  <---------AHL20(2)   --------->TOE2(3)                                          --------->AHL20(1)                    - ----MYB52(1)                                 ------>ZmHOX2a(1)  --------->AHL20(2)                 < -->LBD16                       <-----------GT1<---------TOE1(2) <---------AHL20(2)             <---- ->ANAC46                <----------DOF2     --------->TOE2(2)--------->AHL20(2)         <---------ATHB12 ->LBD16         <---------TOE1(3)           --------->TOE1(2)<---------AHL20(1)  <-----------GT1  <- --->GT1         <---------TOE2(3) --------->YAB1            <---------AHL20(2) <---------YAB1 <----- -LBD16      <----------DOF2   <---------AHL20(2)       --------->TOE2(3)---------->ID1--------->MYB52(1)   aatttccataattcggtttaaggtttcctttttttaatcttactcatcctacgatttacataaatattttaatttttcctttattatcccaacgattttt  6958500                     <---------AHL20(1)                     --------->AHL20(1)                 <---------AHL20(2)                <---------AHL20(2)               <---------ARR11(3)                           <------            <---------AHL20(2)            --------->LBD16                                 <----------       <---------WOX13(1)                 ----------->GT1                              <---------AHL20(2)    --------->AHL20(2)      --------->ANAC58     --------->ARR11(3)                  <---------AHL20(2)    <---------AHL20(2)      --------->ANAC58    --------->CCA1(1)                 <---------AHL20(1)   --------->AHL20(2)--------->ARR11(3)  --------->ANAC55(2)     --------->YAB1   --------->AHL20(1) -------->AHL20(2)   <---------ARR11(3)  <---------ANAC46     --------->YAB1     <---------AHL20(2) ---------AHL20(2)  <---------AHL20(2)   <---------ANAC55(2) <---------AHL20(2)<---------AHL20(2) -----AHL20(2)  --------->AHL20(2)      <---------LBD16--------->AHL20(2)    --------->AHL20(2) --------AHL20(2)<---------AHL20(2)    --------->MYB52(1)   --------->AHL20(2) --------->AHL20(2) ----YAB1   --------->AHL20(2)   ---------->DOF2--------->RVE1(1)--------->AHL20(2)<---------AHL20(2)   atttatttaattgataaattaaatatttttaagcaaaaagattacggaaaatatctattttatataataaaaaaaacatatatatatatttttttctaac  6958600            <-----------GT1              <---------ICU4          --------->CCA1(2)              --------->YAB1         <---------ARR14(2)              <--------HAHB4                     --------->ATHB12         <---------ARR11(3)              --------->ATHB12                   <---------ICU4    --------->LBD16                     --------->ICU4                      --------->YAB1       <---   --------->HSFB2a(2)                  <---------YAB1                     --------->ICU4        <---   <---------HSFB2a(2)                  <---------ATHB12                   <---------ATHB12      <---  <---------LBD16 --------->YAB1  <-----------GT1                    ----------->GT1    ---------->DOF2 -----GT1--------->ARR11(3)      --------->AHL20(2)              --------->MYB52(1)   <---------YAB1- -GT1    --------->ARR14(2)      <---------AHL20(2)             --------->AHL20(2)  --------->YAB1  <   tattcccagaagatttacaataactatatgactaattaactaatcattacatacgcttagttcaaattaactggaaaatcattacatcataaaagcttag  6958700                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                -----                                                 --------->ANAC58                               <----                                                 --------->ANAC46                               -----                                                 --------->ANAC58                          --------->ANAC46                                             <---------HSFB2a(2)                           --------->ANAC58                                     <---------RVE1(1)                                     --------->ANAC58 ------ANAC46                        <---------CCA1(1)                           --------->ARR14(2)-- ------ANAC58  <---------ARR11(3)   <---------ARR11(3)                           ------->TEIL   <---- ------ANAC58  --------->ARR11(3)   --------->ARR11(3)                        <---------ANAC46  ----- -------->ARR14(2)                  <---------AHL20(1)         <---------ANAC46  <---------ARR14(2)-- ---------ARR14(2)           <---------ZAT6  --------->HSFB2a(2)         <---------At4g35610   ------   cgtattcaatgcatcaagatgttagaaaatagtgtcaagatatttttctacaagccataagagttgcatatagttagatgatgtatatgcttcatgccac  6958800  Previous    Next  AGI:  At5g20570.1    Description:  RBX1 (RING-BOX 1). Identical to RING-box protein 1a (RBX1A) [Arabidopsis Thaliana] (GB:Q940X7); similar to ring-box protein Roc1/Rbx1/Hrt1, putative [Arabidopsis thaliana] (TAIR:AT3G42830.1); similar to putative ring-box Roc1/Rbx1/Hrt1 protein [Olimarabidopsis pumila] (GB:ABA18098.1); similar to RING-box protein [Arachis hypogaea] (GB:ABC41134.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 6956662    to: 6958313    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g20580.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G06005.1); similar to unknown [Populus trichocarpa] (GB:ABK93352.1); contains InterPro domain Prefoldin (InterPro:IPR009053) Range:  from: 6958630    to: 6962806    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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