Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        --------->ARR11(3)        --------->WOX13(1) -------->ANAC58         <---------AHL20(2) -------->ANAC58        --------->AHL20(2)                           --------->ZAT14 -------->ANAC46        <---------AHL20(2)                       --------->ANAC46  <---------TOE2(3) ------->SPL7       --------->AHL20(2)         --------->At4g35610   <---------ZAT14     --------->YAB1 ------->HVH21    ------>ZmHOX2a(1)          --------->YAB1     ------->GAMYB    --------->AHL20(2) ------SPL7      --------->TOE2(3)   --------->At4g35610       <---------ALFIN1  <---------AHL20(2) ---->ETT(1)     --------->TOE1(3)<---------ATHB12      <---------YAB1          --------->AHL20(2)   ggacggaacatattgctatccttaaattaaatgtcaatgagttgccatcagaagcgttatgaacaacacactacagtacccatttaatgaataatgctaa  6947400                                              <---------ICU4                                              --------->ATHB51                                              --------->AHL20(2)                                              <---------AHL20(2)                                             <---------AHL20(1)                                             <---------AHL20(2)                                             --------->AHL20(2)                                          <---------AHL20(2)                                          --------->AHL20(2)           --------->ATHB51               --------->AHL20(1)          <---------YAB1            --------->YAB1 <---------ANAC58       --------->AHL20(2)           --------->ANAC46     <---------TOE1(3)       <---------YAB1             <---------ALFIN1 <---------ANAC58       <---------AHL20(2)      --------->MYB46(3)<-----------GT1    <---------DAG2--------->ARR11(3)--------->ANAC55(1)  <---------TOE2(3)    <----------DOF2 ------>ZmHOX2a(2)     <---------AHL20(1)       ---------->DOF2        <-------TEIL   gaacaactttttattattgtgatctagcttagaaccacacataataaattatttcgttttaggtttctcaaaagtcagagtcaaattttgcatacatatc  6947500                      --------->TGA1a                      =======================================bZIP_DOF                      <---------TGA1a                      <---------O2                      --------->O2                   <---------ZAT14                   <---------ZAT18                   --------->ZAT14                  <---------ALFIN1                                                     --------->ARR11(3)                 --------->At4g35610         --------->MYB46(3)                       --------->YAB1                 <---------At4g35610<---------ZAT6                             --------->ANAC58         --------->ARR11(3)       <---------ANAC58             ---------->DOF2 --------->ANAC46         <---------ARR14(2)       <---------ANAC46           ----------->HVH21 --------->ANAC58        <---------CCA1(2)         <---------ANAC58<----------DOF2       --------->ARR14(2)    -------   gattaacttcaaatcttgcagcacacttggctacttgagtgtgaagaacgacctttgatacctctgaaagtctaaatccacaggccaaaaatcatgtata  6947600                                                         <---------DAG2                                                    --------->TOE2(3)                                                    <---------MYB59                                                    --------->TOE1(3)                                                    <---------DAG2                         <---------                                                 <<<<<<<<<GT-1                          <-----------GT1                               --------->ZAT14   <-----------GT1                  <----------DOF2                     <---------At4g35610     --------->ATHB12                     <---------DAG2          --------->ZAT14  <---------ICU4   --------->ICU4           --------->AtMYB61<-----------GT1 >TEIL    <---------ZAT14 <---------ATHB12--------->YAB1 --------->TOE2(3)     <-----------GT1   tagtctaacctctgtacaagtttagctaatcagtaaacaaacaaaaatgatttaccttaccttatgcaagaccaaaactttttacttttttcactttcga  6947700                                               <------------CBF                                              --------->ATHB12                                           <---------------AGL15                                           --------->TOE2(3)                                           --------------->AGL15                <---------ANAC46          <-----------------AGL3                <---------ANAC58          ----------------->AGL3                --------->ANAC55(2)       ----------------->AGL2                <---------ANAC55(2)       ----------------->AGL1                ----------->GT1         --------->ARR14(2)                <---------ANAC58        <---------ARR14(2)            --------->ARR14(2)        --------->LBD16            <---------ARR14(2)       --------->ANAC58                                               -          --------->LBD16            --------->ANAC46                                        <-------        <---------LBD16             <---------LBD16                     <---------TOE2(3)    --------       --------->MYB52(1)     <---------ZAT6<----------DOF2             <---------TOE1(3)  --------->AHL20(2)     --------->MYB46(3)   <---------ZAT14 <-----------------AGL1  --------->LBD16          --------->YAB1     <---------MYB55(2)<---------At5g28300<-----------------AG   --------->LBD16          --------->ICU4   <-----------GT1    <-----------GT1--------->ANAC58           <---------LBD16    --------->At4g35610 -DOF2------->GAMYB   <<<<<<<<<GT-2<---------ANAC46       <---------MYB52(1)       <---------At4g35610   aattttaaccaccggattgcgtaattaccgtagtgagacgcggaacctttattggaaaccggtaatcccggtttaaagtttcttaagcagaaattataaa  6947800                                 --------->ANAC58                                               -----                                 --------->ANAC58                                          --------->DAG2                                ------->TEIL                                              ---------->DOF2                               ------>MYB83                                            <-------------                               ------>MYB46(1)                                         --------------                             --------->DEAR3(1)                                       ---------------                             <---------MYB52(2)                                       ---------------                             <---------MYB46(2)                                       ---------------                            --------->ANAC58                                          ---------------                            --------->ANAC58                                        --------->ARR14(2)                         --------->ZAT18                                            <---------ARR11(1) --------->DOF2          <---------ABI4(2)   *TSS            --------->AtMYB61      <---------ARR14(2) --YAB1             ---------->DOF2      ---------->DOF2  --------->bZIP60(1)      <---------CCA1(2) --->TBP   --------->AHL20(2)--------->MYB46(3)        ----------->HVH21          --------->LBD16 ---   aaaaaagagagaataaaacataaaaagagcaccgaacccaaaccaaagtagaagaaactgacaccatctctgtctctctctctccgtatccaaaaagaga  6947900                                                <---------ANAC58                                                <---------ANAC46                                                <---------bZIP60(2)                                                <---------TGA1a                                                <---------ANAC55(1)                                    --------->LBD16       <---------ARR11(3)         <---------LBD16                                            --------       --------->ARR11(3)         --------->At4g35610                                       <--------      --------->CCA1(1)          --------->MYB52(1)                                      --------->LBD16    --------->AHL20(2)   ------>MYB46(1)        --------->TGA1a                        <---------LBD16 ----->DOF2              --------->ANAC58       --------->O2                      ------->TEIL------- --AGL15                 --------->ANAC58     <---------TGA2(2)                   --------->ARR14(2) ->AGL15                 ------>MYB83        ----------->HVH21                    <---------ARR14(2) -->AGL1         =========================================bZIP_DOF      <-----------RAV1(2) <-------- -->AG--------->RVE1(1)  --------->ANAC46    ----------->TGA1          --------->ZAT2 ------>ZmHOX2a(1) -->AGL2         ---------->DOF2<---------WRKY38(1)--------->REM1(2)   <---------At4g35610 --------->WRKY18(1) -->AGL3 --------->TOE2(3)    <-----------HVH21 <---------ANAC58       --------->At4g35610<---------- -------->GT1  <---------ATHB12----------->HVH21<---------O2           <---------ZAT2 ===============   aagaaaaaaaatctcaaatcaaagaccaagccagtcaccggaaaatgctgacgtgtatagctcgttcgaagcgagcaggcgatgaatcctccggtcaacc  6948000                  <----------ID1                  --------->ANAC58         --------->GLK1(2)   <------ZmHOX2a(2)  --------->ARR14(2)  <---------ARR14(2) ->WOX13(1)       --------->ANAC58 -WRKY38(1)       --------->ANAC46     ----------->GT1 ->P    <---------GLK1(2)             <---------TOE2(2)                            --------->YAB1  -- -WRKY12--------->ARR14(2)            <---------TOE1(2)                            --------->ANAC55(2) -HVH21 <---------ARR14(2)           <-----------RAV1(2)                   <-----------------AGL1 <-- =========HOX2a_HOX2a  <---------CCA1(2)      ----------->GT1       ------>ZmHOX2a(1)           <----   agacgatccagattctaaaaacgccaaatctctaacatctcaggtaaattgaaataaactcactcttctcctccgtctccaattttcgtaattctctctt  6948100                                                                                           <------NtERF2                                                                                          <---------DEAR3(2)                                                                                          <---------ATERF1(1)                                                                                          <---------ORA47(2)                                                                                          --------->RAP2.6(2)                                                                                          <---------RAP2.3(1)                                                                                          -----------                                                                                         <---------RAP2.3(2)                                                                                         <---------RAP2.3(3)                                                                                         --------->ATERF1(2)                                                                                         <---------DEAR3(1)                                                                                         <---------ATERF1(2)                                                                                       <---------RAP2.3(1)                                                                                       <---------ATERF1(1)                                                                                   --------->ZAT14                                                                          <---------SPL7<---------LBD16                                                                    --------->LBD16<---------SPL7                                      --------->ARR11(1)          <---------LBD16  --------->REM1(2)                                      --------->ARR14(2)          --------->RAP2.6(3)--------->SPL7                                      --------->ARR11(3)     <---------At4g35610<------------------SPL14                                      <---------ARR11(3)     --------->At4g35610<---------ANAC46                                      <---------ARR14(2)    <-----------ARR10--------->ANAC58    <---------TOE2(3)         --------->ZAT2               <------ZmHOX2a(1) --------->ANAC58    <---------ANAC46          --------->At4g35610  --------->ANAC58--------->ATERF1(2)<---------DEAR3(1) <---------WOX13(1)           <---------At4g35610  --------->ANAC58<---------ATERF1(2)--------->ANAC46 ------->ATHB12           <---------ARR11(3)   ----------->HVH21 --------->MYB52(1)<---------ZAT14 -------YAB1         --------->AHL20(2)--------->CCA1(2)<-----------RAV1(2)  --------->ANAC46     <-- -----At4g35610--------->TOE2(3)  ---------->DOF2---------->DOF2 -------->P --------->SPL7------>NtERF2   ctgattgagggtattttcgtcaattcaatatcagctcaaagatatggctctgaaagcatcaggagcttaccggcattgtacgccgtgtacggcggcacaa  6948200                                                                                                   <-                                                                                                  ---                                                                                                  <--                                                                                            <--------                                                                                            ---------                                             <------NtERF2               --------->MYB52(1) <--------                      <---------ATHB12     <---------DEAR3(1)           <---------WRKY38(1) ---------                      <------ZmHOX2a(2)   <------NtERF2                 <---------WRKY12    ---------          <------ZmHOX2a(1)            <------NtERF2       --------->GLK1(1)                ---------          ===================HOX2a_HOX2a<---------DEAR3(1)<---------ARR14(2)                ---------        --------->ANAC58       --------->GLK1(2)   --------->DAG2      <------ZmHOX2a(2)  --------->MYB52(1)        --------->ANAC58     <---------KAN4(1)    ---------->DOF2--------->ARR14(2)     <----------DOF2 >RAV1(1)<----------ID1      --------->KAN4(1) <---------DEAR3(2)<---------ARR14(2)     <---------DAG2 ---------HVH21 <-----------HVH21    <---------DEAR3(1)   --------->ARR14(2)----------->GT1<---------LBD16   ggtcagggacaaggacaaggtccgatcaagaacaatccgtcgtcgtcgtcggtaaagtcggatttcgaatcggatcaacggtttaaaatgctttacggaa  6948300  Previous    Next  AGI:  At5g20540.1    Description:  ATBRXL4/BRX-LIKE4 (BREVIS RADIX-LIKE 4). similar to ATBRXL2/BRX-LIKE2 [Arabidopsis thaliana] (TAIR:AT3G14000.1); similar to ATBRXL2/BRX-LIKE2 [Arabidopsis thaliana] (TAIR:AT3G14000.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN62547.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45645.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65283.1); contains InterPro domain Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591) Range:  from: 6947845    to: 6952040    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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