Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100    --------->AHL20(2) ------>AHL20(2) -------AHL20(2)        --------->HSFC1(1)                                                    ------- ------AHL20(1)         ------>ZmHOX2a(1) --------->ARR14(2)                                 -------- ----->AHL20(2)         <---------HSFC1(1)<---------ARR14(2)                          <-------------- ------AHL20(2)         --------->HSFB2a(2)                                      <------ZmHOX2a(1) ---AHL20(2)            <---------HSFB2a(2)         <----------DOF2             ----------->GT1------ ->AHL20(2)       <----------DOF2        --------->GLK1(1)                     <---------TOE2(3) -MYB52(1)--------->WOX13(1)             <---------GLK1(1)                     <---------TOE1(3)   ttttttatatatcaattagtcttttcctagaaatcaagtatgggaatccaccttctttataccgaaacaaaaaataagtttaaggaaaaacttgaaaaag  6908200                                                                                <---------YAB1  -----                                                                            <----------DOF2 <--------                                                                           <---------DAG2   ---------                                      --------->YAB1                     ------->TEIL      <---------AHL20(2)                                --------->TOE2(3)                   <---------ANAC58    <---------AHL20(2)                                --------------->AGL15               <---------ANAC58--------->YAB1                               ----------------->AGL3              <---------At4g35610 --------->AHL20(2) -->DAG2                    <----------DOF2                        --------->At4g35610<---------YAB1 -->DOF2 <----------DOF2   <---------ANAC58 --------->ANAC58       --------->ZAT2   <---------ICU4 ---------TaNAC69(2)       <---------ANAC58 --------->ANAC58       <---------ZAT2  <---------YAB1<--- ----->GT1               <---------ARR11(3) --------->ANAC46     <---------ZAT18<---------AHL20(2)   tgaaacattttcttttgtttagaacaatttctttccataaacataaacgccttatatgactattttgtgagcttgcaccttttttattattatatatatt  6908300   ---------->DOF2                                                      <-----------GT1  <---------AHL20(2)                                                  <---------ATHB12 ---->AHL20(2)     <---------ARR11(3)          ------->TEIL       ------------>CBF -AHL20(1)         <---------AHL20(1)      ------->TEIL     --------->YAB1                       ---- >AHL20(1) <---------ZAT6         <-----------HVH21        <---------YAB1                      <----- ------AHL20(2)    --------->AHL20(1) <---------ANAC46   --------->YAB1--------->AHL20(2)      ------   atatataaagtcagtgttcaaaatattctatgaattggtcatgtgtatgtatgtgggtattatgataaaccaataaactacatgaagaagtatttcgatc  6908400                                   <---------ICU4                                   --------->ATHB12                                  <---------YAB1                                  --------->ICU4                                --------->YAB1                                -------->HAHB4                            <------------CBF                                <---------ICU4                           <---------AHL20(2)                               <---------ATHB51                          --------->ATHB12                               <---------ATHB12                         --------->AHL20(2)                               --------->ICU4                          <-----------TBP                          <---------At4g35610             <---------AHL20(2)    --------->ANAC46   ---------->DOF2                   --------->AHL20(2) ----->WOX13(1)     --------->TOE1(2)                    <---------AHL20(2) -ZmHOX2a(2)        --------->TOE2(3)         <---------YAB1<------------CBF    <---------DOF5.7(2) ------>CBF         --------->TOE1(3)      <---------AHL20(2)        --------------->AGL15   aattacaccaaaaatttgaaaaccttagagctaataatgatttgttttatttttgaaatttaaattgtatactatttattggtaacgtcttcgcgttgga  6908500                                          <---------RVE1(1)                                         <---------ARR11(3)                          <-------TEIL                                   <--------P  <-----------GT1                   <---------TOE1(3)                              ----------->RAV1(2)                                <---------TOE2(3)                       ------------>CBF  <---------GLK1(2)                       --------->MYB59   <-             ----------->GT1------->GAMYB--------->ARR11(3)             <----------DOF2           <--   cttaagaaaaaatgttagtaaaaaatgcaatcgcctggtagaagatttttaaacatataatccagacgttgattctttgattttaggttgatcaagcttc  6908600                        ------>NtERF2                     --------->At4g35610                     <---------At4g35610          ----------->GT1                <---------ANAC58                  <------MYB46(1)          <---------ARR14(2)      --------->HSFB2a(2)                         <------MYB83             --------->ARR14(2)      <---------HSFB2a(2)   <---------ALFIN1      <---------MYB46(3)       <---------ARR11(3) --------MYB52(1)    ------>ZmHOX2a(1)           <---------AtMYB61         --------->ARR11(3) -----GAMYB     <---------ANAC58           <---------TGA1a                --------->GLK1(1)         <   ggttatttctgcaagttttcgtcctctgcctcactctctctccagacatgggtggttttttggttttaaacagcaggtatcttccaaagtttcaatacat  6908700                                                                                        ---------->DOF2                                                                                --------->ATHB12                                                                          <---------ANAC46                                                                          <---------ANAC58                                                --------->MYB59           <---------ANAC58       ---- ----------DOF2                            ------->TEIL     <-----------GT1 <---------MYB46(3)   <---   ttctttttcattctctctgtttttgtattagtaaactttgtaatgtattttaggtctcaagtttacagtttgtattgcttgttgatggggcaaagtccaa  6908800                                                                            --------->YAB1                                                                           <---------YAB1 --------->LBD16                                                          --------->ARR11(3) ------>ZmHOX2a(1)                        <---------ANAC46                <---------ARR11(3) <---------YAB1                      <-----------RAV1(1)            <---------WOX13(1) ----->ARR14(2)             ------>ZmHOX2a(1)  <-----------GT1   <---------YAB1              -------- ------ARR14(2)      <---------GLK1(2)  <---------ANAC46    --------->REM1(1)               ---------   atcctgataatccctaaaacttagcttctccttactcttgtgttgtgttttacattcaaactacaacatgatggatgatcatattttttgtcttacagta  6908900                                        ------>ZmHOX2a(1)                                    --------->ARR11(3)                                  --------->HSFC1(2)                        <---------ICU4                                  <---------HSFC1(2)                        --------->YAB1                               <------ZmHOX2a(1)                           --------->ICU4           <---------------------WRI1   --------->LBD16                --------->AHL20(2) --->GT1  <------ZmHOX2a(1)   ----------->GT1              --------->MYB52(2) <---------YAB1 >ZAT6<---------ANAC46---------->DOF2  --------->TOE2(3) <--------P----------->GT1   acaatgttgtgaggacagttccatcaaagaagaggaaacatcctgaatataagagcaaggttagtagtatggtttaaattatgactctgtgatcacattt  6909000                                                   <---------At4g35610                                                   <---------ZAT2                                             <-------TEIL                                            --------->ARR14(1)                       --------->AHL20(2)   --------->CCA1(2)                   <---------YAB1          --------->ARR14(2)         --------->ANAC58                  --------->ARR11(1)         ----------->GT1                   <---------GLK1(2)         --------->ANAC46                  <---------ARR14(2)         --------->ANAC58             ------>ZmHOX2a(2)         <---------ANAC55(2)         --------->GLK1(1)         --------->ANAC55(2)         <---------GLK1(1)        ------->TEIL   <---------AHL20(2)----------->ARR10                              --------->ZAT2    --------------->AtSPL8           <------ZmHOX2a(2)               <------ZmHOX2a(1)  --------->At4g35610    <---------------AtSPL8          --------->ARR11(3)     <---------LBD16             --------->GLK1(2)    <---------------AtSPL3          <---------ARR11(3)<---------CCA1(2) ----------->HVH21   ttaaaaattgtacgtaaaattctaataaaacttatagggatctcagattcgcgagcttatctcagggattaggagtgacaatctcagagaagctgtgaga  6909100  Previous    Next  AGI:  At5g20440.1    Description:  protein binding. similar to mob1/phocein family protein [Arabidopsis thaliana] (TAIR:AT5G45550.1); similar to hypothetical protein OsJ_011060 [Oryza sativa (japonica cultivar-group)] (GB:EAZ27577.1); similar to hypothetical protein OsI_026928 [Oryza sativa (indica cultivar-group)] (GB:EAZ05696.1); similar to Os03g0577200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050541.1); contains InterPro domain Mob1/phocein; (InterPro:IPR005301) Range:  from: 6908648    to: 6909998    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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