Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             <---------ANAC58                                                                 --------->ARR11(3)                                                                 <---------ARR11(3)                                                                 --------->GLK1(2)                                                                 <---------ARR14(2)                                                                 --------->ARR14(2)                                                               --------->HSFC1(2)                                                               <---------HSFC1(2)                                                            <------ZmHOX2a(1)                                                        ------>ZmHOX2a(1)  <---------ANAC58                                                       --------->TOE2(3)<---------WOX13(1)                          --------->At4g35610         =============HOX2a_HOX2a--------->REM1(1)                   ----------->RAV1(1)                ------>ZmHOX2a(2)<---------ANAC58        <-----                --------->ANAC58                     <---------YAB1  <---------YAB1        <---------ICU4                --------->ANAC46                    <---------ARR11(3) <---------ANAC58<---------AHL20(2) >RAV1(2)       --------->ANAC58  --------->TOE1(2) --------->ARR11(3)--------->ATHB12 --------->AHL20(2)   ccaattgcatataacaagaagccacattagctcgaacatgagacacttctacatgatccttaggaagtatcttgattgcttcaccatatttaaacattgc  6884200     <---------GLK1(2)     <---------ICU4         ---------->ID1                                         --------->MYB46(3)  --------->YAB1--------->HSFB2a(2)                                      ---------->DOF2            - <---------YAB1 <---------HSFB2a(2)                                   <---------At4g35610         --- ----ZAT18    --------->At4g35610                      <----------DOF2--------->At4g35610        <---   accatcataatctctcttctgaaacaacttgttcccttcttccttcaaaccttgtgcctttgaaacacagtcatctaaagtttcaacctctgaaacacaa  6884300           <---------ALFIN1              <---------ALFIN1          ----------------->AGL1        <-----------------AGL2          <-----------------AGL2        <-----------------AGL1          <-----------------AGL1        ----------------->AGL1          ================================================MADS_MADS          <-----------------AG          <-----------------AG        <-----------GT1               <-----------GT1   ---------->DOF2               ---------->DOF2                    <-----------GT1 -------->At4g35610           --------->At4g35610           --------->At4g35610           --------->At4g35610 ------>YAB1               <---------ATHB12              <---------ATHB12                 <---------At4g35610 ------ATHB12 <---------DAG2--------->YAB1  <---------DAG2--------->YAB1  --------->TOE2(3)  --------   tcatctaaagtttccacctttggaacacaatcatctaaagtttccacctttggaacacaatcatctaaattttcaacctttgaaacacagtcatctaaag  6884400                                                                 <----------DOF2                                                              --------->LBD16                                                              ------>NtERF2                                                            <---------LBD16                                                          <---------ARR14(2)                                                          --------->ARR14(2)                       ---------->DOF2                    <-----------GT1                     -------     <----------DOF2--------->At4g35610           --------->At4g35610              ---------->DOF2 <-----------GT1  --------->YAB1                  <---------At4g35610           <---------At4g35610 -->DOF2         <---------ATHB12 --------->TOE2(3)  ---------->DOF2            --------->At4g35610   ttttcacctttgaaacacaatcatctaaagtttcaacctttgaaacacaatcagctaaagtttccgcctttgaaacacagtcatctaaagtttcaacctt  6884500                        --------->TOE2(3)                                         <---------ANAC46              <---------TOE2(3)                                                   <---------ANAC58              <---------TOE1(3)            ---------->DOF2                        <---------ANAC58          --------->At4g35610           --------->At4g35610                  <----------DOF2     ----          <---------At4g35610         --------->YAB1             --------->MYB46(3)        <---------At4g35610 -->TOE2(3)   <---------TOE1(2)      <---------ATHB12 --------->TOE2(3) <---------WOX13(1) --------->At4g35610   tgaaacacagtcatctaaggtttcaacctttgaaacacaatcatctaaagtttcaacctttgaatcatccactaattgactttggcttgtttcagcatca  6884600                    <---------ANAC58            ------>ZmHOX2a(1)              XXXXXXXXXXXXXXXXXXXX>MIR3933      --------->ARR11(3)                   --------->ANAC58      <---------ARR11(3)                 --------->At4g35610     --------->CCA1(1)                ------>ZmHOX2a(1)         --------->GLK1(2)     --------->GLK1(1)            --------->ARR14(2)          --------->HSFB2a(1)                   -     --------->RVE1(1)            <---------ARR14(2)          <---------HSFB2a(1)         --------->YAB1     <---------GLK1(1)           --------->GLK1(1)            --------->HSFC1(2)--------->ATHB12   <-    --------->ARR11(3)           <---------GLK1(1) --------->MYB52(1)    <-----------GT1  <---------ICU4    <---------ARR11(3)    <---------AtLEC2 --------->ANAC58   <---------HSFC1(2)<---------ICU4   ---- ----->At4g35610    <---------ANAC58 --------->TOE2(3)     <------ZmHOX2a(1)   <---------ATHB12 <----   tctgtagatatctcctcattttgcttctccatggcaaatcctcagaagcaaaacaacgagaggaagattccaaatttacaaatgatttctactcatgagg  6884700                                                             ---------->DOF2                                                         ---------->DOF2                                                     --------->ANAC46                                                     --------->ANAC58            <---------ZAT2                           --------->ANAC58            --------->ZAT2                          --------->ZAT18         --------->LBD16                          <---------ZAT14 -------->GLK1(2)                                 --------->ZAT18 --------GLK1(2)                     <---------MYB52(1)--------->ANAC46                   <---------TOE2(3) ------->ARR10               --------->YAB1       --------->ZAT14                        ---------->DOF2 --ZmHOX2a(1)               ----------->TBP       <---------ZAT18                  ------->TEIL   agattctatgcccgagcttcaagagaaactataaaaaccgctaattccacagtgcacacaaaagaaagaagaaagaatacaaatgtatttttaaagtata  6884800                                            ------->MYC3                                            <-------MYC3                                           <---------TGA1a                                           <---------ANAC58                                           --------->ANAC55(2)       ------>ZmHOX2a(2)                                           <---------O2             <------ZmHOX2a(2)                                           --------->O2            --------->AGP1                  <-                                           <---------ANAC55(2)     --------->ARR11(3)              --                                           <---------ANAC58        <---------ARR11(3)     -----------                                           =================================================bZIP_DOF-                                      --------->ANAC58             --------->ARR14(2)   --------->ANAC58                                      --------->ANAC58             <---------ARR14(2)   --------->ANAC58                                  --------->ANAC58                <---------GLK1(1)   --------->MYB52(1)    =================================================bZIP_DOF------->TEIL            --------->ARR11(1)    ---------->DOF2               --------->ANAC58        <---------YAB1         ---------->DOF2  <--   atatacaaaagccctagagagattacaagatagaacacgaacgaaacgtgtctacctcttatgaatcgagatccttgaatcggaaaagaaacggcaattt  6884900   <---------At4g35610   --------->At4g35610                                       ---------->DOF2   <---------ZAT2                                           <------ZmHOX2a(1)   --------->ZAT2                                         --------->LBD16  <---------ARR14(2)                          --------->GLK1(1)  --------->ARR14(2)                         <---------ARR11(3)     --------->ALFIN1 --------HSFB2a(2)                           --------->ARR11(3)   --------->CCA1(2) ------->HSFB2a(2)                <---------LBD16         <---------TOE1(2) ->CBF    <---------ANAC46        <---------ANAC46       <---------LBD16                          --- -------->LBD16                  <---------LBD16         <-----------RAV1(2)                     ---- -------LBD16       --------->AHL20(2) ---------->DOF2  <---------LBD16                  ---------->DOF2   tccggagctgtgtctgggaagattatatgggttatctcgggtaaagagatatcaatttcccaggaaagagatggggatggagagaagacgaagaagcgat  6885000                                                                          --------->ANAC58                                                                          --------->ANAC58                                                                     <---------ANAC46                                       <-------MYC3             <----------DOF2                         ---------->DOF2                       <---------ANAC58             --------->ANAC58          ------->MYC3            <---------ANAC58             --------->ANAC58         --------->O2         <---------ANAC58    ----------->HVH21          <------ZmHOX2a(1) --------->ATHB12       <---------ANAC55(2)   --------->DAG2   --------->WRKY38(1) ---------->DOF2  --------->ANAC58    <---------O2 --------->ANAC55(2)  ---------->DOF2 ------------- ------>At5g28300 --------->ANAC58    <-----------RAV1(1)  <---------ANAC58    --------->O2 ------->GT1 <----------ID1--------->ICU4       <---------MYB52(1)  ---------->ID1 ------>NtERF2   ggtaaaagaagaggaacgacaaggaagaaaagattggaccatgtggctctgttacgagatagcttgctttgtcgtaaagccacgacgactcgttgagcca  6885100  Previous    Next  AGI:  At5g20360.1    Description:  octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein. similar to octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein [Arabidopsis thaliana] (TAIR:AT4G32070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69266.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide TPR-1 (InterPro:IPR001440); contains InterPro domain Tetratricopeptide TPR2 (InterPro:IPR013105); contains InterPro domain Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); contains I Range:  from: 6882123    to: 6884632    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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