Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     <---------AHL20(2)                                               --------->AHL20(2)                                         <----------DOF2                                    --------->YAB1 --------->AHL20(2)                       <--------                                  --------->AHL20(2) <---------AHL20(2)                  <---------GLK1(1) ---YAB1                 ------->TEIL    <---------DAG2                        --------->YAB1   ttcttcatctattaatacaagagtatgcattttcaaaataatactttttttatatatatatgcaaaccagtgttttttttatcaaaataagaaatcactg  6876200                                                  --------->YAB1                                                  --------->AHL20(2)                                   --------->GLK1(1)                                  --------->DAG2                                   <---------GLK1(1)                    --------->CCA1(2)                                  --------->ARR11(3)                   --------->ARR11(3)          --      --------->ATHB12            <---------ARR11(3)        <----------DOF2          ---------->DOF2      -------->HAHB4          ---------->DOF2    <---------YAB1        <---------ARR11(3)         <--     --------->ICU4         <---------YAB1     --------->YAB1          --------->ARR14(2)         ---     <---------YAB1 <---------TOE2(3)       --------->TOE2(3)          <---------ARR14(2) <---------ARR11(3) ---GT1             <---------TOE1(3) --------->TOE2(3)<-----------GT1 --------->ARR11(1) --------->ARR11(3)   tcccaaaatgattcaatagttcaaggttttataaaagatttcttaacatttataatataactctttttgtcaagatatgaaaaatgaaaaagtatctctt  6876300                                                             --------->STY1(2)                                                             <---------STY1(2)                                                     --------->ANAC58    <---------ICU4                                                     --------->ANAC58  <---------AHL20(1)           <         <---------At4g35610                         --------->ANAC46  <---------AHL20(2)           - ------->ATHB12                                     --------->WOX13(1)--------->YAB1               -- -------YAB1                                <---------AHL20(2)   ----------->GT1                  --- ------>ICU4    <---------YAB1              --------->AHL20(2) <-----------RAV1(2)            -------   atgattaagacagatgttttgattcgttcatattccattgaactatatatatatcactcaactagccaggtataatatttcccattacatacaaaaaaaa  6876400           --------->WOX13(1)          --------->AHL20(2)          <---------AHL20(2)                                                   <---------ANAC46  --------->YAB1             <------MYB46(1)                                   <------MYB83  <---------ICU4             <---------MYB46(3)                                <------MYB46(1) <---------YAB1          <-----------RAV1(1)                              <-----------RAV1(1) ---------ARR11(3)      <---------TOE2(3)                                <---------TOE2(3) -------->ARR11(3)   <---------YAB1                                --------->AHL20(2) ------->YAB1     <---------AHL20(2)                               <---------AHL20(2) ------>ICU4      --------->AHL20(2)                          --------->AHL20(2)                  --- -->AHL20(2) <---------ATHB12<------MYB83         --------->ZAT6   --------->AHL20(1)            ----   atgatcatgaaattaatcaatttataaatgttggtttttttttttttggttaacactaaaaccaaaaaataaaataatgttgggttttgtttgacaaaaa  6876500                                                                                             --------                                                                                            <--------                                                                            --------->AHL20(2)                                                                            <---------AHL20(2)    <---------TOE2(3)                                                  ------------>CBF    *TSS <---- ------>DAG2              <------------CBF                      --------->GLK1(2)         --------->WOX13(1) ------>DOF2          --------->YAB1          ----------->HVH21<---------GLK1(2)        ------------>CBF   aaagttaatgaaatgaatgaacgataagaattgagagcaagtctgtctctgacccgtcttaatccgattcttagtcaattttttgagttcgtcaatcata  6876600                                                                      --------->ANAC58                                        <---------ZAT2                --------->ANAC58                            --------->LBD16                     <-----------ARR10    <<<<<<<<<TBF1          <---------HSFB2a(2)               <---------ALFIN1          --------->LBD16 <<<<<<<<<TBF1  <---------At4g35610    ------>MYB46(1)      --------->LBD16           <---------LBD16 ->YAB1<<<<<<<<<TBF1       --------->HSFB2a(2)             --------->ANAC46          <---------LBD16 -ATHB12  <<<<<<<<<TBF1   --------->LBD16    ------>ZmHOX2a(1) <---------CCA1(2)    <---------LBD16 - -----GLK1(2)   ------>ZmHOX2a(1)      ------>MYB83       --------->ANAC46       <---------YAB1   <--   ttcttcttcttcttcttcctctgattcccccagaaaaaacctagctccttccctcatttccccccaaatctcacgacttatttatgctcgggggagacta  6876700                               ------->TEIL                               --------->GLK1(2)                                          <---------MYB46(3)                               --------->ARR14(2)                                        <---------AtMYB61                               <---------ARR14(2)                           --------->At4g35610    <-                              <---------GLK1(2)               ----------->GT1            <---------DEAR3(1)   ----------->GT1            <---------ARR14(1)     <---------At4g35610<-----------HVH21--------->ALFIN1 --------->DOF2               <---------CCA1(2)  <---------ARR11(3)--------->AHL20(2) <---------TOE2(3) -------ATHB12 <---------MYB52(1)          ------>ZmHOX2a(2)---------->DOF2 <---------At4g35610    --   atcaaaggtcaaaatccattagggagggaatcgaatctcgatcgatctcaatttcttctgagaaaagaaaaaaatgtcatcggagattgaggtggtggaa  6876800                                                                                         <----------DOF2                                                                                       ------>NtERF2                                                                                       <---------At4g35610                                                                                      <--------------                                                                                     <---------------                                                                                     <---------------                                                                                    ------>NtERF2                                                                                    <---------At4g35610                                                                                 <---------At4g35610                                                                                 --------->At4g35610          <---------ARR14(2)                                                     --------->ZAT2          --------->ARR14(2)                                                    <-----------RAV1(1) --------GLK1(1)                                                            <---------ZAT14 ------->GLK1(1)  --------->YAB1       ---------->DOF2   --------->ARR11(3) --------->ZAT14   gaaatccaatcgaatcccaaggagaatggggaatcgagttctaaagggattgaagaagagagcttgaagaacgatgtctatactgctgccgcttatggtg  6876900                        <---------ANAC58                        <---------ANAC46                    <---------ANAC58                    <---------ANAC58                   <---------MYB46(3)                                                               -                   <------MYB83                                                         <---------ANAC58                   <------MYB46(1)<---------ARR14(2)                                    <---------ANAC58                 <---------WOX13(1)   ------>ZmHOX2a(1)                                 <---------ANAC46               --------->ATHB12   --------->ARR14(2)                             <---------ZAT14    - -AGL15   <-------TEIL  <---------ANAC58          ----------->RAV1(2)            --------->ZAT14  --- --AGL2--------->HSFC1(2)   --------->ALFIN1  <---------ANAC58              --------->ZAT14     ----- --AGL1<---------HSFC1(2) <---------ZAT6      <---------ANAC58              <---------ZAT14   -------   atttggagaagcttcatagattggttgagtgtgagggttcctctgtttccgagcctgatgctcttggctactatgctcttcagtggtctgccttgaacaa  6877000         --------->WRKY38(1)         --------->WRKY12        --------->ATERF1(1)        <---------MYB52(1)     <------NtERF2    ------>NtERF2   --------->DEAR3(1)   <---------DEAR3(1)  --------->ATERF1(1)  <------NtERF2                                            <---------WOX13(1) <---------ATERF1(1)            <---------ANAC46          <---------ANAC58 <-----------HVH21 --------->TOE1(3)                      <---------ANAC58 -------->ANAC46   --------->TOE2(3)                    <---------YAB1 -------->O2       <---------DAG2                     <-------GAMYB ---->GAMYB        <---------MYB59                   <---------MYB46(3) --->P <-------GAMYB      <---------TOE2(3)          --------->MYB52(2)                          <--- -->MYB46(3) --------------->AtSPL8       <-----------GT1--------->ATHB12                        ----   ccgcgtcgccgttgcccagtaccttatcgaggttttgtgtcattttacgaattgtttgttgattgctaaattagatttgaactagtggttttcaagtttc  6877100  Previous    Next  AGI:  At5g20350.1    Description:  TIP1 (TIP GROWTH DEFECTIVE 1). Identical to Palmitoyltransferase TIP1 (TIP1) [Arabidopsis Thaliana] (GB:Q52T38); similar to zinc ion binding [Arabidopsis thaliana] (TAIR:AT2G14255.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69269.1); similar to Os06g0644500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058187.1); similar to hypothetical protein OsI_005989 [Oryza sativa (indica cultivar-group)] (GB:EAY84756.1); contains InterPro domain Zinc finger, DHHC-type; (InterPro:IPR001594); contains InterPro domain Ankyrin (InterPro:IPR002110) Range:  from: 6876591    to: 6881272    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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