Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                              -------                                                                                              -------                                                                                              <------                                                                                --------->ANAC55(2)--                                                                   <---------AHL20(2)         <------                      --------->MYB52(2)                          <---------AHL20(1)         --------                    <---------MYB52(1)                            --------->AHL20(1)      <---------AHL20(2)  ------->TEIL    <---------MYB46(3)                  <-----------GT1  <---------AHL20(2) --------->AHL20(2) ---TEIL       ------------>MYB.PH3(2)             ------->TEIL  <---------AHL20(2)------->TEIL <----   catgtatgtttaagttgagtttgttagttatacaaaaacatcgattatacatgaatttactagttatatatattttatatttatgtatcagtttaattat  6874400   ------->TEIL                            ----------->RAV1(1) --------------AtSPL8                 --------->HSFB2a(2) -->ATHB51                            <---------HSFB2a(2) -->AHL20(2)                 --------->ANAC55(2) ---ICU4                     <---------ANAC55(2)                                             -------- ------------->AtSPL8       <-------TEIL  <----------ID1                                   <-------TEIL ---AHL20(2)              --------->ARR14(2)                    <---------GLK1(1)  ----------->GT1 ->ICU4                   <---------ARR14(2)                <--------P<---------MYB52(1)  --------->GLK1(2) -----YAB1     ------>ZmHOX2a(1)      --------->HSFC1(1)   <-------GAMYB           --------->YAB1  --   ttatgtactcaaaattcctgtatttttggatacgtttcttctagacaacaaaattcaattgggttgatttcagtttgttatggaatagtaagattcagtt  6874500                   ----------->GT1          --------->AHL20(2)    --------->AHL20(1)    <---------AHL20(2)    --------->AHL20(2)                        ------>MYB46(1)    <---------AHL20(1)<-----------GT1         ------>MYB83            <---------TOE2(3) --->GT1----------->GT1   ----------->GT1<----------ID1               <---------TOE1(3)      -------- ---------->CBF  ---------->DOF2 ---------->DOF2  ----------->GT1     <---------YAB1        ---------   aaacaataaaatgtaaatagaaagtaactagttaaaaaagaaaacaccaaatttgtaaatagatcgagggctaagattacaccaagaaccaaaataaaag  6874600                                                       --------->ARR14(2)                                                      ----------->TBP                                                 ------->TEIL                         --------->YAB1                       --------->YAB1       --------->GLK1(1)                      --------->YAB1         <---------AHL20(2)                 --------->CCA1(2)               ----------->RAV1(1)  <-----------GT1 ------------>CBF         <---------ARR14(2)        <---------AHL20(1) -->DOF2 --------->AHL20(2)              ----------->ARR10           --------->ARR11(3)          <--- >AHL20(2)    --------->YAB1----------->GT1--------->ARR14(2)        --------->AHL20(1)    --------->ZAT6   aattttactattttattcataccaataagactgaaaatagactcagatatgcatctatatatgcaaacaaatattttgcaacaaaacataataacacaaa  6874700                                             <---------ARR11(3)                                             --------->ARR11(3)                                            <---------GLK1(1)                                            --------->GLK1(1)                                           --------->ARR11(3)                                           <---------ARR11(3)                                          <------ZmHOX2a(1)                                        <---------TOE1(2)                                        <---------TOE2(3)                                        <---------TOE2(2)                                     ------>ZmHOX2a(2)                                    =============HOX2a_HOX2a                                    <------ZmHOX2a(2)                            <---------------AtSPL3                                  <---------ICU4     <------MYB83           <---------------AtSPL8                               --------->YAB1     <------MYB46(1)        --------------->AtSPL3  ----------->TBP             <-------TEIL    --------->MYB59<<<<<<<<<TBF1   --------->ARR11(3)                      --------->DAG2 ------ATHB12   <<<<<<<<<TBF1      <---------ARR11(3)     --------->ANAC46---------->DOF2   tcaagtttggttctcttcttcttcttcatagaagtacgatcttaggatatctctatatacacacattttgcagaaaaaaagtttcatcatgctctatttg  6874800                                                                           <---------At4g35610    ---                                        <---------WOX13(1)             --------->ANAC58           ---                                      <---------MYB46(3)             ---------->DOF2              ---                              <----------DOF2                        <---------DOF5.7(2)        <----                         <---------ANAC58                --------->YAB1--------->ANAC46         -----                         <---------ANAC58             --------->YAB1<---------ARR14(2)         <-----                         <---------ANAC46         --------->REM1(1) --------->ARR14(2)         ------                   <<<<<<<<<TBF1     <---------YAB1----------->RAV1(1) --------->ANAC58     <--------   cctaagaaactcttcttgttcttcttctcgtgcattgtggtgattgtcaactacaacaatagtgacttcgtaaacgcagcaaatagcattggcttcgtaa  6874900  <---------At4g35610 ------>ANAC58 ------>ANAC46 ------>ANAC58                                ------>MYB83         <-----------GT1 -----DOF5.7(2)                               ------>MYB46(1)----------->GT1 ----->DOF2                      --------->HSFB2a(2)       ---------->DOF2 ----ARR14(2)   <---------ANAC58 ------>ZmHOX2a(1)     <-----------HVH21                          --- --->ARR14(2)   <---------ANAC58 <---------LBD16       --------->LBD16           <-------TEIL     <-- -ANAC46        <---------ANAC46 <---------HSFB2a(2)  --------->ANAC46  <----------DOF2 --------->ANAC46   acgcagcaaatagcattggcttgaactacggtctcctcggagataacctcccatctccgtcaaaagttataaccctttacaagtccatagacatcactaa  6875000     --------->HSFC1(2)     <---------HSFC1(2)     <---------HSFB2a(1)     --------->HSFB2a(1)    ------->TEIL                        <---------ANAC46    <---------ARR14(2)                  <---------ANAC58    --------->GLK1(2)                   <---------ANAC55(1)   ----------->HVH21    --------->ARR14(2)                  <---------ANAC58     <-----------HVH21    <-----------ARR10                   <---------ANAC55(2)<---------RAP2.6(2)    <---------ARR11(1)                  <---------O2       <---------ANAC58   <---------CCA1(2)                <----------DOF2  <---------ARR11(3)                            <-   <---------GLK1(2)                <---------DAG2   --------->ARR11(3)                           <--   <---------ARR14(1)          <-----------GT1   --------->YAB1        <------ZmHOX2a(1)      <------ ------>ARR14(2)           <-------TEIL <---------bZIP60(2)<---------ANAC46          <------ZmHOX2a(1) -------ARR14(2)       <---------TOE2(3)--------->ANAC55(2)<---------ANAC58 --------->MYB59 <--------   aatccgaatcttcgacccaaacactgaggttcttaacgctttacgtggccatcgtgatattgcggtcacagtaggagttagggaccaggacttggctgct  6875100   <---------ZAT2                       ------>MYB83                                   <------MYB83   --------->ZAT2                      ----------->RAV1(1)                             <------MYB46(1)   --------->At4g35610                --------->AtMYB61                            <-----------RAV1(1)   <---------At4g35610        <---------ANAC58       <---------ANAC58    <---------ANAC58 ----------HVH21              <---------ANAC58       --------->ANAC55(2) <---------ANAC46 --------DOF2               <------MYB83------>MYB46(1)    <---------ETT(1)        <---------ZAT6 ---At4g35610               <------MYB46(1)          <---------ANAC58    <---------ANAC58 -RAP2.3(3)   --------->GLK1(2)      --------->MYB46(3)    --------->ANAC46 <-------TEIL   ctttcagctagcgaagaagctgttaagggctggtttgcgaccaacatcgagccttacttatccgacatcaacatcgcgttcattactgttggtaacgaag  6875200                                                                 --------->ANAC58                                                                 --------->ANAC58                                                            <<<<<<<<<<WRKY18                                                            --------->ANAC58                                                   -------->P --------->WRKY18(1)                                                   ------>MYB46(1)                                <--                                                   ------>MYB83<<<<<<<<<WRKY18                   <---                                                  --------->MYB55(1)                            <----            <---------ATHB12                     <---------MYB55(2)   <---------HSFC1(2)        <----           --------->MYB52(1)                    --------->DEAR3(1)   --------->HSFC1(2)      <------           ------>MYB46(1)                       --------->AtMYB61    <---------HSFB2a(1)     -------           ------>MYB83                          <---------MYB111(2)  --------->HSFB2a(1)     -------     --------->LBD16             <---------ATHB12<---------MYB46(2)  --------->ARR14(2)      <-------     ----------->HVH21           --------->WRKY18(1)        --------->ANAC58<---------CCA1(2)<-------    --------->LBD16             <-----------HVH21--------->MYB46(3)  <---------KAN4(2)    <---------DEAR3(1)    --------->ANAC46      <---------ANAC58       <---------MYB111(1) --------->GLK1(2)--------->ANAC58   --------->LBD16        <---------ANAC58      --------->MYB46(3)  <---------GLK1(2) --------->ANAC58   <---------LBD16 ------>ZmHOX2a(1)--------->AtLEC2    <-----------HVH21   ------>ZmHOX2a(1)--------   tcatccccggaccaatcggtcctcaagtgcttccagtcatgcagtctctcaccaacctcgtcaagtcaaggaatcttcctatctcgataagcacggtggt  6875300  Previous    Next  AGI:  At5g20340.1    Description:  BG5 (BETA-1,3-GLUCANASE 5); hydrolase, hydrolyzing O-glycosyl compounds. similar to BETAG4 (BETA-1,3-GLUCANASE 4), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G20330.1); similar to Os01g0801500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044540.1); similar to Glycoside hydrolase, family 17 [Medicago truncatula] (GB:ABN05913.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63388.1); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 6874789    to: 6875853    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version