Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       ------>ZmHOX2a(2)                                                                                    <------ZmHOX2a(2)                                                                                   --------->ARR11(3)                                                                                   <---------ARR11(3)                                                                                   --------->ARR14(2)                                                                                   <---------ARR14(2)                                                                                   <---------ARR14(3)                                         ----------->GT1<---------ARR11(3)         --------->ARR14(3)                               --------->At4g35610      --------->ARR11(3)         --------->AGP1                         --------->ARR11(3)        --------->AHL20(2)              <---------AGP1 --- ------->MYB52(1)        <-----------ARR10     <---------AHL20(2)             ----------->RAV1(1) --- --------DOF5.7(2)       <---------ARR11(3)    --------->AHL20(2)       --------->MYB52(2)        --- ----->DOF5.7(2)       <XXXXXXXXXXXXXXXXXXXXMIR869.2<---------AHL20(2)  <---------MYB46(3)      <---- >ANAC46      --------->REM1(1)<---------At4g35610 <---------AHL20(2) <---------MYB52(1)       <-----   ttaacgacaatttgcttcaacttcaagtatctcagcatcggtatggtatataatttaaaatcttcatcaagcgttagttccaacagatcttgttttcaac  6857200                                                                                                 <---                                                                                                 <---                                                                                            <-------- ------>ANAC58                                                          <------------MYB.PH3(1)  <--- ------>ANAC46                                                        --------->YAB1       <<<<<<<<<<FUS3 ------>ANAC58            <-----------RAV1(1)                    ------------>CBF          >>>>>>>>>>ABI3 -----ALFIN1         <----------DOF2      --------->ARR11(3) <---------YAB1                >>>>>>>>>>FUS3 ----REM1(2)    <----------DOF2   <---------ANAC46  <---------AtMYB61 --------->MYB52(1)<---------AtLEC2   acggccagagaaacttgacttttctttcatgttgttgtttgaaacatattggtagtggtttttatgtttcaataacagttttttttttgtgcatgcatgg  6857300                                          <---------ARR14(2)                                          --------->ARR14(2)                                      <-------TEIL                       --------------->AGL15                       <---------------AGL15                      <-----------------AGL2                      ----------------->AGL3       <---------At4g35610           --------->ARR14(1)       --------->At4g35610          <---------GLK1(2)       <---------ZAT2 <-----------------AGL3      --------->MYB52(2)            --------->ARR11(1) ------ANAC58         ----------------->AGL2    ------>ZmHOX2a(1)                        --------->ANAC46 ------ANAC58  --------->MYB52(1)   --------->ARR14(2)            <----------DOF2        <---------ALFIN1 -AtLEC2  ------------>CBF          <---------ARR14(2)  --------->ALFIN1                 --------->REM1(1) ------ANAC46  --------->YAB1     ----------->ARR10 ---------->DOF2         <-----------GT1    <-----   cctggagttagctgcaataacagttctatttttagctagattcggttctcctctcaaagtggaaggggctttgatttttttctatttctctacacctctt  6857400                                                                   <---------ARR11(3)                                                               --------->bZIP60(1)                                                               <---------bZIP60(1)                                                               <---------TGA2(1)                                                               --------->ETT(2)                                                               --------->TGA2(1)                                                               <---------ETT(2)                                                             --------->YAB1                                                            ----------->TGA1                                                            <---------ATHB12                    <----                   <---------ICU4                       ------------>CBF            ----------->GT1                   <------------CBF                     --------->MYB46(3)  <----------DOF2  <-------     <----------DOF2                                   ------->TEIL--------->ARR11(3) <---------ZAT6 -----DOF2 <---------CCA1(2)               <-----------RAV1(1)----------->STF1      --------->YAB1  -   tttaagtcttttcaaatctcatattggctaattagatgttccattttgttgtccatgaaccaatgacgacatcttcgtctttagaatagtgatatatact  6857500                   <---------ANAC46                   <---------ANAC58                   <---------ANAC58               --------------->AGL15               <---------ANAC58               <---------ANAC58               <---------------AGL15              <-----------------AGL1       <-----------GT1 ------DOF2   ----------------->AGL1    <---------YAB1 ----GT1      ----------------->AG   <---------ARR14(2) ----------->CBF  --------->ATHB12   --------->ARR14(2)             --------->MYB52(1)         ------   ttgccaatgtaacatttccttgagtggaaaatgatgtcgaatatgagagataatatggagagaaatgaagtaagggaagggcctatagctattgcaattg  6857600                                                                                                -----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                              -------                                                                                              <------                                                                                              -------                        --------->ARR11(3)     --------->AHL20(2)                             <------                      --------->ANAC58        <---------YAB1        --------->At5g28300       <------                      --------->ANAC58      <--------HAHB4         ----------->GT1            -------                  ------>NtERF2             <---------ICU4     <------NtERF2                  <------               --------->At4g35610          --------->YAB1    --------->LBD16                 -------               <---------At4g35610         <------ZmHOX2a(2) --------->ALFIN1               ---------               --------->ZAT2           <---------ETT(2)     <---------ANAC58             ---------->DOF2         <----------ID1 <---------ARR11(3) <---------ATHB12  <---------ANAC46          --------->AtLEC2 ----->HVH21   <---------ZAT2      --------->At4g35610       <---------ANAC58      <-----------HVH21<   acagagataaaacaacaagctgccaagctcttaaatgggctgtcgatcattatatacctcgaggcgggactgtaaaactcgttcatgtcatccaaagatc  6857700 ->ZmHOX2a(2) -ZmHOX2a(2) --->CCA1(2) --->ARR14(1)                                             --------->YAB1 -->ARR11(3)                                             --------->ICU4 ---ARR11(3)                                             <---------ATHB12--------->At4g35610 -->ARR14(3)                <---------At4g35610          <---------YAB1  <---------At4g35610 ---ARR14(2)         ----------->HVH21        <----------ID1        <---------ETT(2) ---AGP1            ------>ZmHOX2a(2)       ---------->DOF2         --------->ETT(2) -->AGP1           <---------GLK1(1)    <---------At4g35610        --------->SPL7                 <-- ---ARR14(3)      --------->ARR11(3)    --------->At4g35610   --------->MYB52(1)            <-------- -->ARR14(2)      <---------ARR11(3)  --------->YAB1--------->ANAC58--------->MYB46(3)      --------- -->ARR10         <---------AGP1    ------->TEIL    --------->ANAC58----------->HVH21     <---------ZAT14 ----------DOF2   ------->TEIL   <---------YAB1   ---------->DOF2--------->TOE1(2)        --------->ZAT14   tgctttgaatatttctaatggatctcacacagatgatgaatcatctgaaagacaaagcaatgataaacggacgaccgctcagtttcttccattgcgctgt  6857800                                                                                                  <--                                                                                                  ---                                                                                                 <---                                                                                                 <---                                               <----------DOF2            ---------->DOF2      <-----                                           <----------DOF2              --------->HSFB2a(2)    ------ --------DOF2                             <---------ANAC58     <---------bZIP60(2)            <------ -At4g35610                               <---------ANAC58  ----------->HVH21          <---------YAB1 >At4g35610                           <----------DOF2 <----------DOF2   <---------HSFB2a(2)   -------   ctttgtatgcgaagaaatgtaagtttttttagtctgttttctttgctttctttcttctttttctgacctgtcttctaaaagcatctctgatcaatgtcta  6857900        ---------->DOF2      <-------TEIL     --------->CCA1(2)  --------->MYB59 ------HAHB4                           <---------REM1(1)                 <---------GLK1(2) ------>YAB1                          --------->ARR11(3)      <---------AHL20(2) ------AHL20(2)                       <---------ARR11(3)      --------->AHL20(2) ------YAB1                      <------ZmHOX2a(2)            --------->AHL20(1) ----------AGL15                <---------ARR11(3)            <---------AHL20(1) --------->AGL15                --------->ARR11(3)            --------->ARR11(3) -----------AGL3          <---------HSFB2a(2)            ------>ZmHOX2a(2)               <-------TEIL ---------->AGL3          --------->HSFB2a(2) ---------->DOF2 <---------ARR11(3) <-----------GT1   taattagatacaaagcgaaatagttttgctggaagatcaagatgtagcgaaagccttgatcgaatatattagccagaattgtatttccacattcattcta  6858000                                                                                     <---------ICU4                                                                                   --------->ARR11(3)                                                                                   --------->GLK1(2)                                                            --------->At4g35610   --------->YAB1                                                   <----------DOF2             ------>MYB83                                                --------->ARR11(3)             ------>MYB46(1)                            <-------TEIL        <---------ARR11(3)           <---------MYB111(1)                        <---------TOE1(2)      <---------CCA1(2)             <---------MYB59     <---   ggtgcctcgttgaagaagagcattaccaggttcacaaaatagtatttctatatctttctctctgatgaaaccagtagtacctaataatcttgtctgaaaa  6858100  Previous    Next  AGI:  At5g20310.1    Description:  similar to kinase [Arabidopsis thaliana] (TAIR:AT2G24370.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69465.1); contains domain SSF52402 (SSF52402) Range:  from: 6857555    to: 6859147    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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