Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                                                                                                 <---                                                                                               ------                                                                                               <-----                                                                                              -------                                                                                              <------                        --------->MYB52(1)                                                  <--------                ----------->RAV1(1)                                                        <---------YAB1          --------->TOE1(1)                                                                --------->ICU4          --------->TOE2(1) ---------->DOF2                                              <---------ICU4         ------>ZmHOX2a(1)--------->MYB46(3)                                            --------->ICU4  --------->ZAT14     <---------MYB59                    --------->YAB1                 <---------YAB1  --------->ZAT18  ------->GAMYB                   ------->TEIL                       --------->YAB1  <---------ZAT18 --------->MYB46(3)     --------->YAB1 <------ZmHOX2a(2)             <---------ICU4<   cttgtggactcctcgtagcaacagcctaaccaaagaaataaactcataacatgaatcgatcacaaatcacaaaacactctgtttttgatcatgattatta  6849800                             <------ZmHOX2a(2)                            <---------ARR11(3)                    ------>ZmHOX2a(2)                   <------ZmHOX2a(2)                  --------->ARR14(2)                  <---------AGP1                  --------->ARR11(3)                  --------->GLK1(2)                                       <---------ANAC46       --------->TOE1(3)    --------->ARR11(3)                           --------->ZAT2  <-----------GT1 <---------ARR11(3)                                   --------->MYB46(3) ----->ICU4       <---------ARR14(2)                       ------>ZmHOX2a(1) ------YAB1      ===================HOX2a_HOX2a            ========================================== --->YAB1        <------ZmHOX2a(1)                         <---------------AGL15 ----ICU4      --------->LBD16                   --------->YAB1       --------->RAP2.6(3) -->ICU4       <---------TOE1(2)                <---------ZAT6       --------->MYB52(1) ---YAB1     --------->TOE1(2)                ----------->GT1   ---------->DOF2                  ---- -ICU4 --------->TOE2(3)--------->YAB1 --------->YAB1     --------->TOE2(3)--------------------->WRI1 ---------YAB1<---------LBD16=====================================HOX2a_HOX2a        --------->DEAR3(2)   ttattaacaccttaacccaggatctatgaagatcagtctcatcgtaaccagtgataacttcctcaacaaagtaacggctgggagtgaatcgacctctctc  6849900                                                       <---------ARR14(2)                                                       --------->GLK1(2)                                                   <---------HSFB2a(2)                                                   --------->HSFB2a(2)                                               <---------O2                                               --------->O2                                      <---                                               <---------TGA1a                                 ------                                               --------->TGA1a                             ------>NtERF2                                            ----------->HVH21                             --------->LBD16                                           --------->DEAR3(2)                             --------->ANAC46                                           --------->MYB46(3)       <-----------GT1      --------->LBD16         --------->ALFIN1                <---------WRKY18(1)        --------->MYB52(1)  <---------LBD16         ----------->HVH21              ----------->HVH21        --------->ANAC46 <---------ATHB12  - ============MADS_MADS              --------->ARR11(3) --------->ARR14(2)    --------->ANAC46  <----- ----------->AGL15                  <---------ARR11(3)<---------GLK1(2)    <-----------GT1------>NtERF2   cctaagaagaagtgatggagaagagcgagcatcgtcaagaccctgaccgacgtcgagaatcgcctctaagtaactgtttacccaatcgttcccggccatc  6850000                                                                               <---------SPL7                                                                              --------->TOE2(1)                                                                              --------->TOE1(1)                                                                             --------------->AtSPL3                                                                             --------------->AtSPL8               <------ZmHOX2a(2)                                          ------->TEIL          ---------->DOF2                                                <---------GLK1(2)        <------ZmHOX2a(2) <----------DOF2                             <---------WOX13(1)  <---------SPL7     --------->GLK1(2)                              --------->ATHB12 --------RAV1(1)    <---------GLK1(2)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ----->RAV1(2)<---------ARR11(3)      --------->ZAT18              --------->ICU4    <---------DAG2 -------->ALFIN1 --------->HSFB2a(2)  --------->ETT(2)             <---------YAB1--------->SPL7    <- ----At4g35610--------->ARR11(3)   <---------ANAC46              <---------At4g35610 <----------DOF2   tggtgggacgatcaaagatcgagaatcgctttgtgttttgtggacagaagtggaattttgggattggagatgattgaatctcgtaccctttttctggttt  6850100                              <---------MYB46(3)                              --------->MYB55(2)                             <---------DEAR3(1)                             --------->ALFIN1                           <---------ANAC46                          <---------AtMYB61                          --------->ALFIN1                         --------->ZAT18                         <---------ZAT14                                            --------->HSFB2a(2)                         --------->ZAT14                                         <----------DOF2                        --------->ALFIN1                                         ------>ZmHOX2a(1)                      <---------ANAC46                                       ------->TEIL                 ----------->RAV1(2)                                      --------->ANAC46                 --------->At4g35610 <--------P                           --------->ANAC55(2)                 <---------ZAT2 --------->ALFIN1                          --------->ANAC55(1)               <-----------RAV1(2)<------NtERF2                           --------->ANAC58           <------ZmHOX2a(1) <---------AtMYB61                            <---------ANAC55(2)       ---------->DOF2<---------ANAC58   ----------->TGA1            --------->ANAC46   --------->ANAC46   <---------ANAC58 --------->MYB52(2)            --------->ANAC58   --------->SPL7   <----------ID1<---------At4g35610<-------GAMYB          <----------DOF2--------->ANAC58 --------WOX13(1)--------->ZAT2 <---------ANAC46        *TSS         --------->ANAC58 <---------SPL7   gatagacgacaaaggactcagctggagtgtggtggtggggttagtgacgaatcacacagttctttggacacaagacacgcatccttttcgaacggctcaa  6850200                                                                                     ----------->GT1                                                                                  <-----------RAV1(1)                                                       <----------DOF2      --------->KAN4(2)                                                    --------->ARR11(3)      <---------ARR14(2)                                                    <---------AHL20(1)      --------->ARR14(2)                                                    <---------ARR11(3)     <---------KAN4(1)                                                    --------->AHL20(1)     <---------HSFB2a(1)                                       <-----------HVH21                   --------->HSFB2a(1)  -----                                   --------->DAG2  --------->CCA1(1)       <----------TaMYB80   <----                                  ---------->DOF2  --------->RVE1(1)      <---------KAN4(2) <--------   <---------ANAC58        ----------->GT1   ----------->GT1         ---------->DOF2 <---------ANAC46   <---------ANAC58      ---------->DOF2------------>CBF  --------->TOE2(3)--------->KAN4(1)---------   atatttcttcccattttttatattttagaaagaaaaaaaagtgtcaatggaaaatatctttcttaacaaatgaaagaatattctctgtggtgaatttttt  6850300           <----------DOF2           ------>ZmHOX2a(1)         ------>ZmHOX2a(2)         ----------------->AGL3        <------ZmHOX2a(2)       --------->AGP1       --------->ARR14(2)                                 <----------DOF2       <---------ARR14(2)                             --------->YAB1       <---------ARR11(3)                            <---------ATHB12  ------->GAMYB       <---------YAB1       --------->ARR11(3)                          --------->YAB1    -------->P           --------->ARR11(3)     ----------->ARR10                         --------->AtMYB61    --------->WOX13(1)    <---------ARR11(3) ---->AHL20(2)                           <-----------GT1 ------>ZmHOX2a(2)               --------->RVE1(1) -----AHL20(2)          <---------AHL20(2)    --------->MYB46(3)   --------->MYB46(3)    --------->CCA1(1) -AHL20(2)--------------->AGL15      <---------AHL20(2)<---------ARR11(3)          ------->GAMYB >AHL20(2)<---------------AGL15      --------->AHL20(2)--------->ARR11(3)       ----------->RAV1(1)   aaatgtttagatccttttttagtgattttttttaagagtttaattaccaccactaatgatcttttgtcatcaaccaagtttacaacagaaaatatcattt  6850400                                                 <---------ANAC55(2)                                                 --------->ANAC55(2)                                                 <------MYB46(1)                                                 <------MYB83                                         <---------ICU4                          --------->ATHB12      --------->MYB59  <---------ZAT14       ------->GAMYB                          --------->ATHB51 --------->ICU4        --------->ZAT14      --------->MYB46(3)                         <---------YAB1 --------->ICU4 <-----------HVH21             -------->P                       --------->YAB1   <---------YAB1--------->bZIP60(1)           ------->GAMYB                       --------->ANAC55(2) <---------YAB1       <---------ZAT6     --------->MYB46(3)                      <-------TEIL----------->RAV1(1) <---------bZIP60(1)        <-----------GT1   tcaaaattgagacactgagacacatacataattgaacaacacattattattaggtgatgtcaagtactgttctgccaactatttaacaaccagctattga  6850500                    ------>MYB46(1)                    ------>MYB83                --------->ANAC58                --------->ANAC58      <---------GLK1(2)                               --------->AHL20(2)      --------->ARR11(3)                              <---------AHL20(2)      <---------ARR14(2)                 <---------ZAT2 <---------YAB1      --------->ARR14(2)                 --------->At4g35610    ------>ZmHOX2a(2)      <---------ARR11(3)         <---------AHL20(2)  <---------AHL20(1) --------->ANAC46 <---------MYB59--------->AHL20(2)  --------->AHL20(2)                   --------->LBD16 --------->ANAC58 ------->GAMYB --------->AHL20(2)   <---------AHL20(2)       <-----------GT1   <---- --------->ANAC58--------->MYB46(3)      <---------At4g35610  --------->ARR11(3)      <-----------GT1   tacaagcagattttgtgcaaccaaatttgataaaaaaaatttcagctcatcacaaattatttttgatctctctccctattttactatttttccgagtagg  6850600                                                <----------DOF2                                            <---------MYB52(1)                                    <--                                          ----------->GT1                                         <--                                     --------->ANAC58                                         -------                                     --------->ANAC55(2)                                     --------                                     --------->ANAC58                                        --------                                     --------->ANAC46                                        --------         ----------->GT1<-----------RAV1(1)--------->TOE2(3)                                 <-------        <---------TOE1(3)            --------->ANAC55(1)                           <----------DOF2<--        <---------TOE2(3)    <---------ANAC46 --------->MYB52(2)         --------->AHL20(2) <-------- <---------ZAT6 <-----------GT1      <---------ANAC55(2)              --------->TOE1(3)     <-------- --ZmHOX2a(1)--------->MYB52(2) ----------->ARR10                     --------->TOE2(3)  ------------   atagtgtttgaaggttatttacaagtttgtggctcagagacgcaacgttactttctagtttcaactttcaacccttaaaatgtctctttttcccatcatt  6850700  Previous    Next  AGI:  At5g20280.1    Description:  ATSPS1F (SUCROSE PHOSPHATE SYNTHASE 1F); sucrose-phosphate synthase/ transferase, transferring glycosyl groups. similar to ATSPS3F (sucrose phosphate synthase 3F), sucrose-phosphate synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT1G04920.1); similar to ATSPS2F/SPS1 (SUCROSE PHOSPHATE SYNTHASE 1), sucrose-phosphate synthase [Arabidopsis thaliana] (TAIR:AT5G11110.1); similar to ATSPS4F [Arabidopsis thaliana] (TAIR:AT4G10120.2); similar to Sucrose-phosphate synthase 1 (UDP-glucose-fructose-phosphate glucosyltransferase 1) (GB:O22060); similar to unnamed protein product [Vitis vinifera] (GB:CAO69295.1); similar Range:  from: 6844716    to: 6850156    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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