Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  <--------ATHB1                                <---------ICU4                                                -------                                -------->HAHB4                                                =======                               <---------ATHB51                          <---------ZAT18      <------                               <---------YAB1                            --------->ZAT18      -------                             --------->YAB1                            <---------At4g35610    -------                          ----------->GT1                              --------->At4g35610    <------                      --------->ZAT2                                 ================================                      --------->At4g35610                           <---------MYB52(1)      <--------                      <---------At4g35610             ===============================================                   <---------ATHB12      --------->ANAC55(2)     <---------LBD16 --------->ANAC58 -------->ANAC58  ------>MYB46(1)        <---------ANAC55(2)  ------->TEIL       --------->ANAC58 -------->ANAC58  ------>MYB83 --------->ICU4    <---------MYB52(1)--------->LBD16     --------->AHL20(2) ------->DOF2    --------->WOX13(1)--------->AHL20(2) <----------DOF2<--------P  --------->ANAC46 <--   gaaagcatctctaatggaccaatcagctctgtaataattcaatatgtattcgttgtctttcatgtactccggtagctcacaatacgacattaattcacgt  6842500                                                                                                  <--                                                                                          <---------ANAC58                                                                                          <---------ANAC58                                                                                     <------ZmHOX2a(2) -->TGA1a             <-----------GT1                                               --------->ARR14(2) ===================bZIP_DOF                                                        --------->ARR11(3) ---O2            <------------------------ANAC81                                   <---------ARR11(3) -->O2           <---------ANAC58                                                   --------->ARR14(3) -->ANAC46       <---------ANAC46                                                   <---------ARR14(3) ---TGA1a   <------------------------ANAC81       <---------ZAT14                   <---------ARR14(2) ===MYC_MYB <---------MYB46(3)                    --------->ZAT14       --------->At4g35610<--------- ---GT1  <----------DOF2                      --------->ZAT6 <---------ALFIN1     --------->ANAC58<-- ===bZIP_DOF<-----------RAV1(1)         --------------->AtSPL8      <---------ARR11(3)------>ZmHOX2a(2) -------DEAR3(2) <---------ANAC58 <---------------AGL15  --------->At4g35610      --------->ANAC58---   cgtttcattgtcttttgttgcgtttttctcttcttccttctcttggtaccactactctcatctccaccgtgatcatctccaggcacgatcttgcttttgc  6842600                ------->TEIL             --------->ANAC58          ------>NtERF2          --------->LBD16     <---------MYB52(1)     --------->ATERF1(1)    <---------At4g35610                <-----------GT1    <-------GAMYB                   <---------ICU4 -------At4g35610                  --------->ICU4 -DOF2  <---------LBD16            <---------MYB52(1)                                   --------->ARR14(2) -----GAMYB  --------->ANAC58   ---------->ID1                                         --------->YAB1 ------>At4g35610         <---------At4g35610  --------->MYB59           <---------GLK1(2)       ----   agttgccgttgccgcatgaaactgtttctgcttcgtcgttatgaccattttggtccataagagctctcgagtatcgattcttgagacaagaatactcaat  6842700                                          ----------->GT1                                         ----------->GT1                                      <------ZmHOX2a(1)                               ------>ZmHOX2a(2)                              --------->YAB1                               ==============HOX2a_HOX2a                     <---------YAB1                               ===================HOX2a_HOX2a              <---------ICU4                              <------ZmHOX2a(2)                            --------->YAB1                              ====================HOX2a_HOX2a             --------->ICU4                              ===============HOX2a_HOX2a                  <---------YAB1                              --------->CCA1(2)                         --------->YAB1                             <---------AGP1<------ZmHOX2a(1)            <---------ICU4                             --------->ARR14(3)                        <---------YAB1                             <---------ARR11(3)                      --------->YAB1                             --------->ARR11(3)                  <---------YAB1 <---------YAB1                             --------->GLK1(2)                  <---------GLK1(2)                             <---------ARR14(3)     <---------AHL20(2) --------->ICU4   ------>ZmHOX2a(2)         --------->ARR14(2)  <---------AHL20(1)  <---------ICU4 <---------ARR11(3)          <---------ARR14(2)  --------->AHL20(1) <---------YAB1                  - ----->YAB1                ----------->ARR10    --------->AHL20(2)  --------->ICU4                  <   cttgatctcaagagaagatggtgagagagaagatctgagaggagaggaaaatatataatgaagaaagattattattattattatagttgaagtaacaagt  6842800                                                                                                -----                                                                                          --------->ANAC58                                                                                     ---------->DOF2                                                                                    --------->AHL20(2)                                                                              ----------->RAV1(1)                                                            *TSS         <---------ZAT2   --------->ANAC58              <---------TOE2(3)                       ----------->GT1    --------->At4g35610    <----    ----------->GT1                            --------->ANAC58          <---------At4g35610    <XXXX -------->AHL20(2)                             --------->ANAC58          --------->ZAT2   --------->ANAC46 ---------AHL20(2)                             --------->ANAC46    <------ZmHOX2a(1)<---------AHL20(2)   attaaaatgtgaatttaagtttgaggggagagagagagagagaagaaacaaggaagatgtgaaatgtaaggagacagctgcaacatttaaagacgaaact  6842900                                                            --------->AHL20(1)                                                            <---------AHL20(2)                                                            --------->AHL20(2)                                                            <---------AHL20(1)                                                           <---------ATHB12                                                       <---------YAB1                                                       ------------>CBF                                                  <------MYB83                                                  <------MYB46(1)                  <---------YAB1                                                 --------->MYB59                 --------->YAB1                      <---------ANAC58         <---------MYB52(1)                <---------ICU4                      <---------ANAC58       --------->MYB111(1)                <---------YAB1                      <---------bZIP60(2)    --------->MYB46(2)                 --------->ICU4                      <---------ANAC46       --------->MYB52(2)               <---------ICU4                     <------NtERF2         <---------MYB52(1)                --------->ICU4 ---->TOE2(3)    <------MYB83             ------------>MYB.PH3(2)         <---------YAB1<---------AHL20(2) ------DOF2      <------MYB46(1)         <---------MYB46(3)--------->AHL20(2)<---------YAB1      <--- XXXXXXXXXXXXXXXXMIR2111A/B       <----------DOF2--------->MYB46(2)  <----------DOF2   <-----------GT1   ttagtatgcaggtagaagttggtgtcgtgttttcatcttttagttgttagttaggttatcaataaattcttcttttttgattattattatttcatttccc  6843000               <---------AHL20(2)          --------->MYB52(2)                                                   --------->ARR11(3)        <---------MYB52(1)               ----------->GT1                  ----------->GT1      <---------ANAC58                  --------->DAG2                 --------->CCA1(2)      <---------ANAC46                 ---------->DOF2                --------->ARR11(1)      <---------ANAC58              --------->ANAC58          <---------DAG2   --------->GLK1(2)     <---------TOE2(2)              --------->ANAC58          <----------DOF2  <---------ARR11(3)     <---------TOE1(2)   <---------AHL20(2)             --------->ZAT6--------->ARR11(3)          --- -------DOF2   <---------YAB1   <-----------GT1       <-----------GT1 <---------ARR14(2)    <--------   tttctcttacgtttgtttttattgtatttttttttaacaagaaaagtgattcagttttacactactttttgagatatggaaaatcttttgaatacgagaa  6843100                                                                                         <------ZmHOX2a(2)                                                                                        <---------ARR14(2)                                                                                        --------->ARR14(2)                                                                                    <---------LBD16                                                                                   ------>MYB83                                                                                   ------>MYB46(1)                                                                                   --------->MYB52(1)                                                                                   -------->P                                                                                  --------->ANAC46                            ------>MYB46(1)                                       <---------ALFIN1                            ------>MYB83                                          --------->MYB55(1)                          --------->DREB2C(2)       ------->TEIL          <---------ANAC46                          ------->GAMYB         --------------->AtSPL8    <---------ANAC58                         --------->DEAR3(2)    <---------ANAC58    <---------WOX13(1) --------->LBD16                        ------>MYB83  <-----------GT1    <----------DOF2  <---------ANAC58------>ZmHOX2a(2)                        ------>MYB46(1)        <---------ANAC46  --------->ATHB12--------->MYB46(3) -------->GT1         --------->MYB46(3)       <---------ANAC58 <---------YAB1 ------->TEIL         < -HSFB2a(2)          --------->DEAR3(2)   --------->MYB52(1)  --------->ANAC55(2)<---------MYB55(2) -   gagtaaatttaggcgattttaagaccgaccgactcaaaattcactaccggcttgtacctcttttacatgattgatgccttgtacccaccggatcgtttgt  6843200                         --------->AtLEC2                    --------->ANAC55(2)                    <---------ANAC55(2)                 --------->ARR11(3)           --------->CCA1(2)          <---------ARR11(3)                                       <------ZmHOX2a(1)             ----          --------->ARR11(3)   --------->YAB1            --------->AHL20(2)                   -------      ---------->DOF2<---------------------WRI1       --------->YAB1                    <---------YAB1 ---------AHL20(2)--------->CCA1(2)             ----------->GT1 <---------ICU4     <-----------GT1 -------->YAB1   <---------ARR11(3)     <---------ZAT18 --------->AHL20(2)      <----------DOF2 <----   atttataagaaagatataagatatgtgatgcaaacaaaatagtactcttgatgtaaaaataaaaaataaggactcatttagacttttactatgcttcaat  6843300          <---------ANAC46       --------->GLK1(2)    --------->AHL20(2)    <---------AHL20(2)          <---------ANAC46   --------->AHL20(2)      <------MYB46(1)    --------------->AGL15 --------->TOE2(3)         <------MYB83      <---------ANAC58 ----->YAB1            --------->ATHB12      <---------ANAC58           --------->ARR14(2) -->WOX13(1)          <---------YAB1     <----------DOF2                <---------ARR14(2) -----ATHB12          <---------TOE2(3)  <---------DAG2   ----------->GT1                    <-------   caacattaaattctgtgtgaaattaagattggtgaggggtttactttacttgaaatagacgagtaattttagaaaatttgcatttttgagttcttatgtg  6843400  Previous    Next  AGI:  At5g20270.1    Description:  HHP1 (HEPTAHELICAL TRANSMEMBRANE PROTEIN1). similar to HHP3 (heptahelical protein 3), receptor [Arabidopsis thaliana] (TAIR:AT2G24150.1); similar to HHP2 (HEPTAHELICAL TRANSMEMBRANE PROTEIN2) [Arabidopsis thaliana] (TAIR:AT4G30850.1); similar to HHP2 (HEPTAHELICAL TRANSMEMBRANE PROTEIN2) [Arabidopsis thaliana] (TAIR:AT4G30850.2); similar to Hly-III related proteins [Medicago truncatula] (GB:ABP03876.1); contains InterPro domain Hly-III related proteins; (InterPro:IPR004254) Range:  from: 6840835    to: 6842860    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version