Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          ------->TEIL                                        <---------TCP20                                        --------->PCF2                                      ------->GAMYB ---------->DOF2                   <-----------GT1  <--------P                         --------->MYB46(3)                              --------->ATHB51 <-------GAMYB                       <---------MYB52(2)                              --------->YAB1 ------MYB46(1)                    --------->MYB52(1)                               --------->ICU4 ------MYB83               <------------CBF     ---------->DOF2         --------->HSFC1(2) ---------ANAC46      ----------------->AGL1 --------->AtLEC2           <---------HSFC1(2) --------MYB46(3)     <-----------------AGL1 --------->ANAC58           --------->HSFB2a(1) --GT1                <-----------------AG   --------->ANAC58           <---------HSFB2a(1)   ttgggttgatttttcttgaatacgacctgaattggtacaacggacccatgcaaagaaagacaatcgagcctagaaatttctgaacaattatcgacttatc  6826100                                 --------->ARR14(2)                      <---------ARR11(3)                      <-----------ARR10                      --------->ARR11(3)                     <---------CCA1(2)                 <---------MYB111(1)                --------->ANAC55(1)                --------->ANAC55(2)             <----------DOF2                <---------ANAC55(2)          --------->ZAT6                --------->ANAC46 <---------ARR14(2) --------->AHL20(2)------>MYB46(1)         <-----------GT1     --------->TOE2(3)         --------->TOE2(3) <---------AHL20(2)------>MYB83 <---------CCA1(2)             --------->ZAT6           ------>NtERF2   catataaatgctataaacacctaatatctcatccatatccacatttaacactttgttttttctaacattagtatgctactattcttcgatgccttaatat  6826200                --------->MYB46(2)                --------->MYB111(1)             <------MYB83             <------MYB46(1)                           ----------------->AG            --------->MYB46(2)                    --------->ATHB12            --------->MYB59                       --------->YAB1            --------->MYB111(1)                   <--------HAHB4       --------->ICU4                             <---------ICU4          <---------ANAC55(2)       <---------YAB1                            <---------ATHB12         --------->ANAC55(2)    <---------YAB1                               --------->ICU4         <-----------GT1  ------>ZmHOX2a(2)   <-------GAMYB----------->GT1                --------->YAB1      --------->ICU4      <---------ARR11(3)  <------MYB46(1)                             <---------YAB1  ----------->GT1      <---------ANAC58  <------MYB83  --------->MYB111(2)        <---------AHL20(2)--------->DAG2        <---------ANAC58  <---------MYB46(3)              --------->ZAT6 <---------YAB1 --------->AHL20(2) --------->ANAC55(2)  ----------->GT1    <---------YAB1       --------->AHL20(2)---------->DOF2      <-----------GT1<----   cggatggttattattaggtagttatatttagtctgaacactaaattttataatcattacccaaaaagtaattagtcacgttttttacttgatctaaattt  6826300                                                                                     --------------->AGL15                                                                                     <---------------AGL15                                      --------->ZAT18                               <----------------                               <---------YAB1                                       <----------------                          --------->YAB1                                            >>>>>>>>>RAP2.2                   --------->ANAC46   <---------ZAT18                             --------->ARR11(3)          <---------ARR11(3) <-----------GT1          <---------At4g35610         <---------ARR11(3) -------GT1  <----------DOF2 --------->YAB1           --------->At4g35610        --------->CCA1(1)   acaaatgtacaatgtctttacgcgctaaaaataacaattgtggacaaaaaaaacttagcagacaaaattgaccacaagtgataatatctaaatttggatt  6826400                                <---------ARR11(1)                                ------->TEIL                ----------->HVH21     <---------ANAC55(1)              <---------ANAC55(2)     <---------ANAC46              --------->ANAC58  <-----------ARR10              --------->ANAC46  --------->ARR14(2)              --------->ANAC58  <---------ARR14(2)              --------->ANAC55(2)     <---------ANAC58              --------->ANAC55(1) <---------ANAC58     ------->GAMYB             <---------CCA1(2)                           --------->AHL20(2)     ----------->RAV1(1)       <---------ARR14(1)                          ----------->TBP    --------->MYB46(3)        --------->LBD16                            ------>ZmHOX2a(1)    --------->ANAC46         --------->ANAC46                     <------------CBF <---------WRKY12--------->MYB52(1)   <---------ANAC58          <---------AHL20(2) -AGL2        --------->bZIP60(2) <---------ANAC58              --------->AHL20(2)                  < -AGL3   --------->ANAC46    --------->ANAC55(2)              <----------DOF2                 <------   tgttcaacgacacaacacgtaacgcgtcttcccgtatcttgcgtatgactccttgagagcctctctttaattgtcctataaatataagtctctcttgcaa  6826500                                                                                                   <-                                                                                          --------->DAG2                                                                                         --------->DAG2                                                                                        ---------->DOF2                                                                                        =============                                                                                   ==================              <---------MYB52(2)                          --------->ANAC58         ---------->DOF2 <-         --------->AtMYB61 --------->YAB1<-----------GT1  --------->ANAC58      --------->ANAC58   --        *TSS  --------->MYB46(3)   <-----------HVH21    --------->CCA1(2)       --------->ANAC58----- ----------DOF2------->GAMYB ---------->DOF2    <----------DOF2          <---------HSFB2a(2)  <------ ---AtLEC2  ----------->RAV1(1)--------->DAG2--------->ARR11(3)          --------->HSFB2a(2)  <------   gacttttgaaaccacaacaaacacaaaaatcaaaaggggtcatttactatcttttaagagacgacatatatagttctcgaccaagaaaagaaaagggggt  6826600                                                       --------------->AGL15                                                      <---------ANAC58                                                      <-----------------AGL2                                                      <---------ANAC58                                                      <---------ANAC46                                                 <---------ANAC58                                                 <---------ANAC55(1)     --------->ARR11(3)       --------->LBD16    --------->ANAC55(2)                   <---------HSFB2a(2)     <---------ARR11(3)       <------NtERF2      <---------ANAC55(2)                   --------->HSFB2a(2) --------At4g35610          <---------LBD16      <---------ANAC46           <---------MYB52(1) ========bZIP_DOF      --------->MYB52(1)        <---------ANAC58          <-------GAMYB ========bZIP_DOF      <---------ICU4         <---------MYB52(1)        ------>NtERF2  <---------LBD16 --------TGA1a --------->ANAC46<------NtERF2  <---------ARR14(2)     <---------At4g35610     <------ZmHOX2a(1) ------->At4g35610  --------->YAB1            --------->ARR14(2)     --------->At4g35610  <------NtERF2 ------>HVH21  <---------ANAC55(2)       ------------>MYB.PH3(1)<<<<<<<<<MYB2<---------MYB46(3) ---ANAC58     --------->ANAC55(1)       --------->MYB52(1)  <---------AtMYB61       <---------REM1(2) ---ANAC58     --------->ANAC55(2)  ----------------------->TaNAC69(2) --------->DEAR3(1)--------->LBD16   gacctgagttcttcaacacataacataatggccggagttttcaaaacggttacgtttcttgttttggttttcgctgccgttgttgtcttcgcggaggact  6826700                                                                                       <------NtERF2                                                                                      ------>NtERF2                                                                                     <----------ID1               --------->ANAC58                                                      ----------->HVH21               --------->ANAC46                                                     --------->ATERF1(1)               <---------ANAC55(2)                                             --------->ALFIN1               --------->ANAC55(1)                                            --------->LBD16               --------->ANAC55(2)                                           <---------ANAC58               --------->ANAC58                                              <---------ANAC55(1)              <---------LBD16                                                <---------ANAC58             --------->CCA1(2)                                               <---------ANAC46 <------            --------->ARR11(1)                                    --------->At5g28300<---------DEAR3(1)          <---------YAB1                                         --------->LBD16 <--------P<---------ZAT2     <------MYB46(1)                    --------->LBD16          ----------->GT1--------->REM1(2)     <------MYB83                   ------->TEIL              --------->MYB52(1)--------->ZAT14 <-----------RAV1(1)                --------->TCP16(1)        -------->P <----------DOF2   --------->ZAT2   acgatgttggtgatgatacggaatggacgagacctatggaccccgagttctatactacttgggctaccggtaaaactttccgtgtaggcgacgagctcgg  6826800                                                                                     --------->DDF1                                                                                   <-----------RAV1(1)                                                                                <------ZmHOX2a(2)                                                                               --------->ARR11(3)                                                     ------->GAMYB    <---------ANAC58<---------DREB2C(2)                                                  <-----------GT1     <---------ANAC58<---------DEAR3(1)                 <---------At4g35610       ---------->ID1           <---------ARR14(2)<---------At1g77200   <---------AHL20(2)                  <---------ANAC58   --------->ICU4  <---------AtLEC2   <---------YAB1--------->At4g35610   <---------ANAC58 --------->YAB1------>ZmHOX2a(2) ---DEAR3(1)<---------YAB1    <----------DOF2 <---------YAB1        --------->ARR14(2)<---------DEAR4(1)   tgagttttattgttcttatagctgaaatatgtctttgtttttcttgttcttataacagtcatagttatgggatcgtgcatggatcatgtcggtgttgttc  6826900                                                               ------>MYB46(1)                                                             <---------MYB55(2)                                               --------->ATHB12------>MYB83                                              --------->AHL20(2)                                              <---------AHL20(2)   <---------TOE2(3)                                       --------->DAG2        --------->MYB46(3)                                      ---------->DOF2        --------->DEAR3(1)          --------->GLK1(2)                                  <---------------AGL15      --------->DREB2C(2)        <---------GLK1(2)                                 ==============================================================MADS_MADS                                 <-----------------AGL3      ------->GAMYB         <-----------GT1                                --------->At4g35610         --------->DEAR3(2)    <---------YAB1     <----------DOF2            <---------At4g35610    <---------ARR14(2)      <---------YAB1      <- <----------DOF2      ------->TEIL--------------->AGL15--------->ARR14(2)      --------------->AGL15   tgtctttctttctatattcttatgaacatattttagctaaaaaagggattaattgagtttccaccgactgatgttgatattcttattacagaatttgatt  6827000  Previous    Next  AGI:  At5g20230.1    Description:  ATBCB (ARABIDOPSIS BLUE-COPPER-BINDING PROTEIN); copper ion binding. Identical to Blue copper protein precursor (BCB) [Arabidopsis Thaliana] (GB:Q07488;GB:O82664); similar to UCC3 (UCLACYANIN 3), copper ion binding [Arabidopsis thaliana] (TAIR:AT3G60280.1); similar to Chain A, Umecyanin From Horse Raddish- Crystal Structure Of The Oxidised Form (GB:1X9R); similar to umecyanin [Armoracia rusticana=horseradish, roots, Peptide, 115 aa] (GB:AAB34409.1); similar to Umecyanin (UMC) (GB:P42849); contains InterPro domain Blue (type 1) copper domain; (InterPro:IPR000923); contains InterPro domain Cupredoxin (InterPro:IPR008972); contains InterPro dom Range:  from: 6826508    to: 6827631    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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