Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               --------->HSFB2a(2)      ----------------->AGL3     <-----------HVH21   <-------MYC3   ------->MYC3   ------->PIF5   ------->MYC2                                            <---------ALFIN1   <-------MYC2                                           <---------ZAT18   <-------MYC4                                         --------->ORA47(1)   ------->MYC4                                         <---------RAP2.6(3)   <-------PIF5                                         <---------SPL7  --------->O2                                          ------>NtERF2  <---------TGA1a              ------->TEIL            --------->DEAR3(1)  --------->ANAC55(2)      --------->LBD16             --------->ATERF1(2)  --------->TGA1a         <---------ANAC46             <---------ANAC46            <---------ZAT18  <---------O2          --------->At4g35610            <---------ANAC58         <---------ANAC46   <-  >>>>>>>>>>HY5      <------ZmHOX2a(2)                 <---------ANAC58  ----------->HVH21       <<<< <---------TOE1(2)  --------->ARR11(3)               --------->ZAT14--------->ARR14(2)           ---- ---------ALFIN1    <---------ARR11(3)        ----------->HVH21     --------->GLK1(2)           <---- ----->PCF2  <---------HSFB2a(2)            <---------At4g35610     <---------ARR14(2)         <-----   tcccacgtgtcatttgtagaaagatcagccgtgaacctatattttctggtgacactgccgtccacttgcaattctgcgaccttcgtgaacttaatattcc  6813700                          <---------YAB1                       <---------RVE1(1)                      <---------ARR11(3)                                --------->CCA1(2)                      --------->ARR11(3)                              --------->YAB1                  --------->ANAC58                                   <---------ATHB12         <----------DOF2 --------->AHL20(2)                   --------->DEAR3(1)      <-----------GT1 <---------GLK1(2)                     <---------At4g35610   ----------->GT1--------->ANAC58                          --------->LBD16                  -------- ---------DOF2    --------->ANAC46                      --------->GLK1(2)          ---------->DOF2 <<<<<<AtSR1   --------->ZAT18                          --------->ARR14(2)      --------->ANAC46 ----->LBD16   <---------ZAT14                          <---------ARR14(2)      --------->ANAC58 -----ANAC46   <---------ZAT18                --------->ZAT2--------->At4g35610 --------->ANAC58    < ----LBD16     --------->ZAT14              ------->GAMYB <---------LBD16   --------->ANAC46 <-------   gcgttttgtaacttttgtgcacgagatttttatagcttagtagcaacgagcagagaagaatccgcagaccaatgatatacacaagcaaagtcaaattaaa  6813800                                              <---------ARR11(3)                                              --------->GLK1(2)                                              --------->ARR11(3)                                             --------->CCA1(1)                              <--------                                    ------>MYB46(1)                                      --------->AHL20(2)                                    ------>MYB83                                         <---------AHL20(2)          --------->ANAC58        ------->GAMYB                                         --------->AHL20(2)          --------->REM1(1)       <---------MYB59                                       <---------AHL20(2)          --------->ANAC58        --------->AtMYB61                                   --------->TOE2(3)     <---------------AtSPL8      --------->MYB46(3)                                 <---------AHL20(1)     --------------->AtSPL8     -------->P --------->AHL20(2)                       --------->AHL20(1)     --------->MYB59            ------>MYB46(1)                                     --------->ARR11(3) ->AHL20(2)                     ------>MYB83 --------->RVE1(1)                      --------->ICU4 ---------ICU4                --------->AtMYB61        ---------->DOF2              <---------ARR11(3) --AHL20(2)  <---------ALFIN1--------->MYB46(3)  <---------LBD16             --------->TOE1(2) <-----   aatcattttggtacaccacttggaaaatcaaaccaaccaaacaaaaaaaatctcggagaaagaaccaaaaactaattaacctagaaaatattaatttatg  6813900                   --------->AHL20(2)              ------->MYC3              <-------PIF5              <-------MYC2              ------->MYC2              ------->PIF5              <-------MYC3             <---------ANAC55(2)             <---------O2             --------->ANAC46                 <----------DOF2             --------->bZIP60(2)              <---------DAG2             ============================================bZIP_DOF             --------->ANAC55(2)             <---------ANAC58             --------->TGA1a                 <---------ANAC58             <---------TGA1a             <------------CBF     ------>ZmHOX2a(1)             --------->O2          --------->At4g35610     ------>MYB46(1)     --------->DEAR3(1)   <             ============================================bZIP_DOF          <---------ABI4(2)        <        --------->ANAC46           <---------ZAT2          ------>MYB83  --------->DAG2             -       --------->MYB46(3)          <---------At4g35610   <---------MYB59---------->DOF2             - -AHL20(2) <------------OsbHLH66  ------>NtERF2     <----------DOF2   <---------AHL20(2)          <-- ----YAB1  <---------ALFIN1      <---------DEAR3(1)--------->TOE2(3) --------->AHL20(2)          ----   cttaaaacatccaccacgtgattaaaaactaatcgacggctgagattgcttttcctttaccttcctctctattaaaaagcaccgtcttcacttctcatcc  6814000                                                                              <------ZmHOX2a(2)                                                                             --------->ARR11(3)                                                                             <---------ARR14(2)                                                                             --------->ARR14(2)            --------->TOE1(2)                                  --------->GLK1(2)<---------HSFB2a(2)       <---------MYB52(2)                                      --------->ARR14(2)            -------- ---------ZAT2                                           --------->TOE2(2)   --------->AGP1  <------- ---------At4g35610                                      --------->TOE1(2)  <---------At4g35610 -------->ZAT2                                     --------->YAB1    ------>ZmHOX2a(1)    --------->CCA1(2) -------->At4g35610       <-----------ARR10  ------>ZmHOX2a(1)<---------GLK1(2) --------->HSFB2a(2) -------ALFIN1      <----------ID1     <<<<<<<<<TBF1     --------->TOE2(3)  --------->At4g35610 ----->LBD16<---------LBD16       <----------DOF2 <---------ATHB12   ================HOX2a_HOX2a    -   ccagctcaaacaaacctggaaaacaacaaatctaagctttcttcttcctctaatcaaaacctaagaatctcctaattcagatccagaacgagagatgctt  6814100              ------->GAMYB             --------->ANAC46                                    --------->YAB1                  ----        <----------DOF2     --------->ATHB12                    <---------ATHB12                ----- ->HSFC1(2)  --------->ANAC58                           --------->GLK1(2)             <---------At4g35610 --HSFC1(2)  --------->ANAC58      <-------TEIL        --------->ARR14(2)    ------->TEIL       ----- -------->ANAC46<---------ALFIN1<---------MYB46(3)     <---------GLK1(2) <---------MYB52(1) <-------TEIL   ctacgaagcgcttcaacgccacttctaaactcattggttcatgtctcgagtccaagagattctccaatcgaaaccgttgaatctgttcatcagattcaac  6814200      <-------TEIL     ==================================HOX2a_HOX2a     <------ZmHOX2a(2)                                                  <---------GLK1(2)           <    --------->AGP1                                           --------->ANAC46                       -    <---------ARR14(2)                                    <---------ZAT18                          <-    --------->ARR14(2)                                    <---------ZAT14                     ------- --->GAMYB                                                --------->ZAT14                 ---------->DOF2 ---->MYB46(3)                         <-------GAMYB  --------------->AtSPL3         ================ ---->ANAC46--------->ZAT6      ------>ZmHOX2a(1)     --------------->AtSPL8         <------ZmHOX2a(1)   gacacagatccataacactctctgcgtcttcttcctcttgctgttatagcccgatgtctgtacactctagcgacgattcttcaaggaggatgaaaagaac  6814300                                           <---------MYB52(1)                                          <---------DEAR3(2)                                         --------->DEAR3(1)                                         <---------DEAR3(1)                                       --------->MYB52(1)                                      ------->GAMYB                                      --------->DEAR3(1)                                     --------->DEAR3(2)                --------->ANAC46     --------->MYB46(3)              <----------DOF2  <-----------RAV1(2)                <------------AtMYB77       --------->ABI4(2) <------NtERF2  --------->ANAC58   <---------ARR14(2)           <---------MYB46(3) -----------HVH21                  --------->ARR14(2)          --------->ALFIN1 ----->NtERF2   --------->ANAC58--------->ANAC58               <---------AtMYB61 --------bZIP60(1)     ----------->HVH21 --------->ATERF1(2)   <---------DEAR3(1)  --------->ALFIN1-- -->MYB52(1)<------ZmHOX2a(2)   --------->ANAC58            <---------DEAR3(1)  <---------ARR14(2) <- ==================HOX2a_HOX2a  --------->ANAC46           <---------At4g35610 <------ZmHOX2a(1)   <-   ggcgtcagatagcgatctacgacatttgacatcgacgaaaccgccggtgagtaagtttttgagcggtggtgctttgatggaggatgtggatgaaggaatc  6814400                                                                                 --------->MYB55(2)                                                                                 <---------MYB46(3)                                                                                <---------AtMYB61                                                                             <---------DEAR3(1)                                                                             --------->ALFIN1                                                                             <---------AtMYB61                                                                           <---------MYB46(3)                                                                           --------->MYB55(2)                                                                          <---------AtMYB61                                                                        <---------MYB46(3)                                                                       <---------DEAR3(1)                                                                       <---------DREB2C(2)                                                                       <---------ANAC46                                                                      <---------ABI4(1)                                                                     ------>NtERF2                                                                    <---------ATERF1(2)                                                                    --------->ATERF1(2)                                                                   <---------ANAC46                                                                   <---------ANAC58                                                                   <---------ANAC58                                                                  --------->At4g35610                                                                  <---------At4g35610                                                                  <---------ZAT2<---------DEAR3(1)                                                                  --------->ZAT2--------->ALFIN1               ------->TEIL                                      --------->MYB111(2)            --------->ANAC58                           <---------ARR14(2) <---------DEAR3(1)            --------->ANAC58                           --------->ARR11(3)<------NtERF2            --------->ANAC46                           <---------ARR11(3)<---------ABI4(1)  --------->MYB59                                      --------->ARR14(2)<-------GAMYB        <------ ------->ARR14(2)                                    ----------->ARR10<------NtERF2<---------ANAC46<- --------GLK1(2)           --------->YAB1       <---------AtLEC2<--------P--------->ALFIN1    <------ --------ARR14(2)         <---------YAB1    <----------DOF2  <---------TOE2(3)<---------MYB46(3)  ---   ggattcggtcttatacgcacttcgtcttatgatggtataagttgggctttggatgaagatactgaggttgctggcggtggtggtggtgggatgtttcacg  6814500                            ----------->HVH21                           ------>ZmHOX2a(2)                          <------ZmHOX2a(2)                          --------->CCA1(2)                         <---------ARR11(3)                         <---------ARR14(2)                         --------->AGP1                         --------->ARR11(3)                         <---------AGP1                         --------->ARR14(2)                   <---------AtMYB61                --------->ALFIN1             =====================HOX2a_HOX2a      --------->DAG2   ----------->ARR10                                                      <------     ---------->DOF2  <--------P              ----------->HVH21                               ------>ZmHOX2a(1)   ===============================HOX2a_HOX2a ----------->TGA1                 --------->ATHB12   <------ZmHOX2a(1)<---------MYB46(3)     xxxxxxxxxxxxxxxxxx>smallRNA(si3)   <---------YAB1  -------   ==============================HOX2a_HOX2a--------->At4g35610        --------->YAB1         ------- ---LBD16    <------ZmHOX2a(1) <---------AtMYB61 <---------YAB1       <---------YAB1  <---------At4g35610 --------MYB46(3)<---------MYB46(3)<---------MYB46(3)              <---------YAB1<---------WOX13(1) ---At5g28300====================HOX2a_HOX2a<---------At4g35610 <-------TEIL<---------At4g35610 ------>ALFIN1  <---------AtMYB61 --------->ALFIN1     --------->ZAT6 <---------TOE2(3)      <-------   gtggaggaaaaggaaggagtggtggtagatctgatggtggtgatggaggtgacgataacactgatgttcattatcgtaagatgattgaagctaatcctgg  6814600  Previous    Next  AGI:  At5g20190.1    Description:  binding. similar to binding [Arabidopsis thaliana] (TAIR:AT1G80130.1); similar to unknown [Populus trichocarpa] (GB:ABK95066.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide region (InterPro:IPR013026) Range:  from: 6814095    to: 6815381    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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