Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           --------->LBD16       <---------LBD16                     --------->ATHB12    <---------GLK1(1)------>ZmHOX2a(2)    <---------YAB1       <----------DOF2             ---------- --------ID1    <---------WOX13(1)      <---------ZAT6    <-----------GT1          <---------ATHB12   acgacgaactccgcatagattgatctgtagagaatggagatagtgttattgggaacgttgaaacccttttgttattcagaagtcaataaatctgaaagtg  6797000                                                                       <-----------------AGL3                                                                       <-----------------AGL1                                                                       <-----------------AGL2                                                                     <-----------GT1                                                                    <---------ZAT14                                                                    --------->ZAT14                                                                   <----------DOF2                                                                 <------------------------ANAC81                                                                <-----------GT1                                                               ---------->ID1                                                         <----------DOF2                                                        ------>ZmHOX2a(2)                   ----------->GT1                    --------->ARR14(2)                --------->MYB52(2)                    <---------ARR14(2)                    <------MYB83            <------MYB83                              <---------ARR11(3)                    <------MYB46(1)            <---------MYB46(3)           <---------WOX13(1)   <-----------GT1               <--------            <------MYB46(1)            --------->ATHB12<------ZmHOX2a(2)--------------->AGL15 >DOF2  <-----------RAV1(1)         ------->TEIL      --------->ARR11(3)<---------------AGL15  <-----   aagggggaatttgttggtttgtggtatatagatagatgaactcattgatcaatagggatctttttttctctttactgtttttggtctctgagattggttc  6797100                                    <---------GLK1(2)                                  <---------AHL20(1)                            ----------->GT1                          ----------->GT1                          <---------ANAC46                         <-----------------------TaNAC69(2)        <---------ANAC58<---------ZAT14 <---------ANAC58    <---------ANAC46 <---------ANAC58  --------->ZAT18--------->AHL20(1) <---------ANAC46  --------->ZAT14<---------ARR11(3) -MYB46(3)         <---------ZAT14--------->ARR11(3) ------>ZmHOX2a(1) --TEIL <---------ANAC58--------->ZAT14 <---------YAB1                                  ----------->GT1   atgtcttgtttcgtttctgagttcagtgaagtgaaaaatattctcattcagtctccttcaaactctagttttcgacgaattcaatctgtagggtaaaaca  6797200                                                 --------->RAP2.6(2)                                              --------->ANAC58                                --------->REM1(1)----------->RAV1(1)                         --------->YAB1       --------->ANAC46                      --------->CCA1(2)       --------->ANAC58              ---------->DOF2                   --------->ANAC58  --------->ANAC58                   --------->GLK1(2)                   --------->ANAC58  --------->ANAC58                 <------ZmHOX2a(1)        ------              <-------TEIL --------->ZAT6   ---------->DOF2      --------->CCA1(2)   ---------->DOF2   tttgtagtagagaaggctcataagctataagactacaacaagcctacaaagccacaattttactaagagacaggaatctaaagaatgcaaagggtaagag  6797300                                                               <---------YAB1                                                     <---------TOE1(3)                                                     <---------TOE2(3)                                                    ---------->DOF2                                              <---------AHL20(2)             ------------------------                                              <---------AHL20(1)          <---------AHL20(2)    --------->GLK1(2)                  --------->TOE1(3)     <---------AHL20(2)            --------->ANAC58 <---------AHL20(2)                    --------->TOE2(3)    <---------AHL20(2)             --------->ANAC58 --------->AHL20(2)             <---------YAB1--------->AHL20(2)          --------->AHL20(2) ----->GT1   <------ZmHOX2a(2)  --------->AtLEC2   <---------AHL20(2)<---------YAB1      ---------->DOF2   taaaaaattctatggatcagaaaacaaattagtcatgctaaccttcattttatttaaagttttttatttttgtcattaaaatccaaaaaacaaaagcaaa  6797400                                                                                              -------                                                                                             --------                                                                                           --------->O2                                                                                           <---------TGA1a                                                --------->ATHB51                           --------->bZIP60(2)                                                <---------ICU4                             <---------O2                                                -------->ATHB1                             --------->ANAC58                                          *TSS <---------YAB1  --------->DAG2              --------->ANAC46                                     <------MYB46(1)  <---------MYB46(3)                   --------->ANAC55(1)                                     <------MYB83    <---------AtMYB61                     <---------ANAC55(2)                                  >>>>>>>>>SARD1--------->ATHB12                           --------->ANAC55(2)            ------->GAMYB         >>>>>>>>>CBP60g  <-----------RAV1(1) <------ZmHOX2a(1)   --------->TGA1a  ------------>CBF     <---------REM1(1) ---------->DOF2<---------ANAC46                   --------->ANAC58 >ANAC81 ----------->RAV1(1)<------ZmHOX2a(1)  --------->ICU4 --------->MYB52(1)      ----------->HVH21   tgctaccaatacaacagactacaaaatgtaggagaaatttggtgaaagcattattgtggtgggataagggagaggaagagagagcgatgggacacgtaac  6797500                                        <---------ALFIN1<---------ZAT18                                        --------->DEAR3(1)                                        --------->AtMYB61                                     <---------ALFIN1   --------->LBD16                            --                               --------->O2           <------NtERF2                               <--                             <---------ALFIN1        ------>NtERF2                                ---                          --------->ANAC58           --------->MYB52(1)                         -----      --------->YAB1      --------->ANAC46    <---------MYB46(3)                             -------- -->MYB52(1)              --------->ANAC58   <---------MYB52(1)                              -------- --->HVH21<-----------GT1------>ZmHOX2a(1)  <-------GAMYB       <---------WRKY18(1)        ------->TEIL   gaggctattgataaacccttcgtcttcctcgccacttctccacctccgttgttgccaccggactcttgaccctaactctgtcttctctcttcgaacctca  6797600                                        <------NtERF2                                       --------->RAP2.6(2)                                       ------>NtERF2                                       <---------ATERF1(1)                                       <---------RAP2.3(1)                                      <---------DEAR3(1)                                      <---------ATERF1(2)                                      --------->ATERF1(2)      --------->ANAC58               --------->ATERF1(1)      --------->ANAC58              ------>NtERF2    ---------->DOF2         <----------DOF2-------->P ------->YAB1             ---------->ID1--------->ATERF1(1)                                      ---- -------ATHB12    --------->GLK1(2) <---------ATERF1(1)                                          <--- ------>MYB46(3) <---------GLK1(2)  <---------RAP2.3(1)  --------->MYB52(2)                 <------ZmHOX2a(1) ---->WOX13(1)   --------->ARR14(2) --------->LBD16    <--------P                          <--------- ->TOE2(3)       <---------ARR14(2)<---------DEAR3(1)  <---------MYB52(1)       <---------GLK1(2)---- ->TOE1(3)     ----------->ARR10  <---------LBD16    ----------->GT1 <-----------GT1    ---------->DOF2   atcaccaaaagcaagggacgattctcttgtcttttctccggcggcaaccagagagaggttagttttcttacttacttcccttgattcttcgaaaggacaa  6797700                    --------->WOX13(1)                                                            <--           <---------At4g35610                                                            <---------ANAC58           ----------->RAV1(2)                                                            <---------ANAC58           --------->At4g35610 <-------TEIL                                             <---------YAB1       --------->ARR14(2)    --------->ZAT18                                          <---------ICU4       <---------ARR14(2)    <---------ZAT18                                          --------->YAB1       --------->GLK1(2)    <---------ANAC58                                          -------->HAHB4   --------->HSFB2a(2)<---------ATHB12                                               --------->ICU4-- ----->ARR11(3)  --------->ANAC58                                                 --------->AHL20(1) ------ARR14(2)  --------->ANAC58                                 <---------AtLEC2<---------AHL20(2) -ID1 <---------GLK1(2)--------->YAB1     <---------ANAC46  <----------DOF2       --------->AHL20(2) ----->ARR14(2) ------->TEIL<---------ANAC58          ----------->HVH21           <---------AHL20(1)   atcttgtagaatctgctgaacccaatcagagcgtacataacatggggtcgaattgtctgactctttttgaatggtcttactcaattaattatgcttgtta  6797800                                                                                                    -                                                                                     ================                                                                                     ------>ZmHOX2a(2)                                                                                    =================                                                                                    --------->ARR14(1)                                                                                    <------ZmHOX2a(2)                                                                                   --------->ARR11(3)                                                                                   <---------ARR14(2)                                                                                   --------->AGP1  --                                                                                   --------->ARR14(2)                                                                          <---------At4g35610    ----      --------->GLK1(2)                                               --------->ALFIN1 <---------At4g35610   --------->DAG2                                              <------ZmHOX2a(1) ----------->ARR10 <-   <---------TOE2(3)    <---------At4g35610                    =============================HOX2a_HOX2a   <---------TOE1(3)    --------->At4g35610                    ============================HOX2a_HOX2a -------ZAT6            --------->ZAT2              ------->TEIL      <---------REM1(1)--------->At4g35610 ------->YAB1        <---------At4g35610           <---------CCA1(2)<---------ANAC46--------->CCA1(2)   ctgataaggttctgaacaagtttagcagctcaactcttagctatatgtctactgtatctagtctaggactgggtgtagcagattagatccgctgtgagtt  6797900  Previous    Next  AGI:  At5g20120.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO65640.1) Range:  from: 6795368    to: 6797174    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g20130.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO21131.1) Range:  from: 6797442    to: 6798901    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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