Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  <---------ANAC58          --------->ZAT2                                                             ------->MYC3                 <---------ZAT2                                                             <-------MYC2                 <---------At4g35610                                                             <-------PIF4              --------->At4g35610                                                             ------->PIF4              --------->LBD16                                                             ------->MYC2              <---------At4g35610                                                             ------->MYC4              <------NtERF2                                                             <-------PIF5             --------->ANAC46                                                             <-------MYC3            <---------LBD16                                                             ------->PIF5          --------->ARR14(2)  <-------MYC2                                             ------->TEIL        <------NtERF2  <-------MYC3                                          --------->ANAC58      ------>NtERF2  ------->MYC2                                          --------->ANAC46      --------->LBD16  ------->MYC3                                          --------->ANAC58     --------->LBD16        - ---->ANAC58                                       --------->AtMYB61         --------->ANAC46   ----- ---->ANAC58                                  <---------ALFIN1 ------->TEIL <---------LBD16     <---- --->DOF2                        ---------->DOF2<---------ALFIN1<---------ANAC58   <---------ARR14(2)   gccatgtgcttcgaactaaacttctccaaactatctaaagtcattctcgcacacctaaacgcatgtgcctgcataaaccccggcatgtccgcagctagta  6792900                                                                                              ------>NtERF2                                                                                             --------                                                                                             ------->GAMYB                                                                                             --------                                                                                             <-------                                                                                            ---------                                                                                            <------NtERF2                                                                                            ---------                                                                                            ---------                                                                                           ------>NtERF2                                                                                           --------->ABI4(1)                                                                                           <---------ATERF1(1)                                                                                          <---------ALFIN1                                                                                          --------->DEAR3(1)                                                                                         <------NtERF2                                                                                         --------->ATERF1(1)                                                                                         <---------ABI4(2)                                                                                        <-----------HVH21                                           <---------ARR11(1)                           ------>NtERF2                                           --------->ARR14(2)                           <---------ATERF1(1)                                           <---------ARR14(2)                          --------->bZIP60(2)                                      ------>NtERF2                                    --------->ANAC46                                      --------->ABI4(1)<-----------HVH21               --------->ANAC58                     --------->ATERF1(1)  <---------CCA1(2)                            --------->ANAC58                    <---------At4g35610  <---------SPL7------->PIF5                   ------>NtERF2                    --------->At4g35610--------->RAP2.3(1)                            --------->LBD16                    --------->ZAT2   --------->ANAC46 --------->TGA1a                <---------ATERF1(1)                    <---------ATERF1(1)<------NtERF2  --------->bZIP60(2)            <---------ALFIN1                    ------>NtERF2    --------->DEAR3(1)------->MYC2                  --------->DEAR3(1)                   --------->DEAR3(1)--------->RAP2.3(2)                            --------->ATERF1(1)                   --------->RAP2.3(2)<---------ATERF1(1)                          ------>NtERF2<----                   <---------DEAR3(1)--------->RAP2.3(3)                           <---------ATERF1(1)                  --------->RAP2.3(1)--------->RRTF1(3)<-------MYC2               --------->DEAR3(1)                 --------->LBD16     <---------DEAR3(1)------->MYC3               <---------ALFIN1                --------->ANAC46    --------->ERF1    --------->O2                --------->ANAC46           --------->ARR11(3)       --------->ATERF1(1)<-------MYC3             ------>ZmHOX2a(1)<---           <-----------ARR10       <---------ATERF1(1)--------->ANAC46          <---------ATERF1(1)           <---------ARR11(3)--------->ARR14(2)       <---------TGA1a          <---------ALFIN1 <----    --------->DEAR3(1) ------>NtERF2--------->DEAR4(2)<---------O2<---------GLK1(2)--------->LBD16 <---------ALFIN1<---------ATERF1(1)--------->RAP2.3(1)<-------PIF5         <---------ALFIN1--------- ----->ZmHOX2a(1)------>NtERF2    --------->ANAC46    ===============================================MYC_MYB ---->ARR14(2)  --------->DEAR3(1)<---------DEAR3(1)<---------ALFIN1   <-----------GT1<------NtERF2 -----ARR14(2) <---------LBD16   ------>ZmHOX2a(1) <---------REM1(2) <-----------GT1<---------DEAR3(1)   tcctcaccgtcaacatctccgccgctgcctctatcctcgccgccgtatccctctccacgtgagacaccgattttctcccctcctccgccgcgccaccgcc  6793000        --------->YAB1     <----------DOF2 <----------DOF2 ->DEAR3(1) ->DREB2C(2) --ALFIN1 >MYB46(3) >ATERF1(1)      <---------------AGL15 >ORA47(2) <---------ICU4 -----DAG2--------->ICU4                                                                         XXXX -------DOF2     --------------->AGL15              <-----------HVH21                      <------MYB46(1) ------DOF2--------->ATHB51                <---------ARR11(3)                              <------MYB83 >DEAR4(2)<---------YAB1                   --------->ARR11(3)          <----------DOF2 --------->ATHB12   tttctttctttcattatttctactacaagtagtctctaactcgaatatatccctcatcacatggttttgatgacttttattcgactggacgattggtttt  6793100                                         ------>ZmHOX2a(2)                                        <------ZmHOX2a(2)                                       <---------ARR11(3)                                       --------->ARR11(3)                                       <---------ARR14(2)                                       --------->ARR14(2)                           <---------ZAT14                           --------->ZAT18                           --------->ZAT14<----------DOF2                         <---------------AtSPL3                                                    --                <---------ARR11(3) <---------LBD16              <---------YAB1                -------                --------->ARR11(3) ------>ZmHOX2a(2)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   <-              ----------->ARR10--------->ICU4            <---------TOE2(3)              <---------WOX13(1) XXXXXXXXXXXXXXXX>MIR838 <---------------AtSPL8          <---------TOE1(3)            --------->ATHB12   tcttctacttcttgttgagatattgatggtgtactgatcgggatctttggtttggatttagggtttatgagtgagtgtttcgacgaagtgattgagaatt  6793200                                                                             <---------------AGL15                                                                           --------->YAB1                                                                           --------->AHL20(2)      <-------TEIL           <----------DOF2                         --------->ANAC55(2)    <-------- ------->HSFB2a(2)           <---------DAG2                          --------->YAB1   --------->ARR14(2) -->GLK1(2)    <----------DOF2                   --------->ATHB12   ---------->ID1<---------LBD16   < --------HSFB2a(2)   <<<<<<<<<TBF1               --------->YAB1  <---------AHL20(2)   <---------ARR14(2)   tgtagaagttcatgagacttttcttcttcgactttttgggtctctcttcattcattgtttttgttattttttcgtaataatatttgtggaaactctttag  6793300                                                          <---------YAB1                          <-----------HVH21               --------->ICU4                   --------->ANAC58                     <--------HAHB4                   --------->ANAC55(2)                  --------->YAB1                   --------->ANAC55(1)          *TSS   <---------YAB1                   --------->ARR11(3)                   --------->ANAC46            <---------At4g35610                      --------->AHL20(1)                   --------->ANAC58            <------NtERF2  <---------AHL20(2)       <-----------TBP               <---------AHL20(2)              --------->At4g35610                 --------->AHL20(2) --DOF2   <---------MYB52(1)                 <---------ZAT18  --------->AHL20(2) <------------CBF  -- ---------ANAC46  <---------LBD16            --------->ZAT18 <---------YAB1   ------------>CBF ------   tggctcatatgcgttatttatacggaagagtcagagacagaaatgagtccgctctctattattattaattctgtcgagtttgcaattgaatatatagcac  6793400                                <---------AHL20(2)                            --------->ATHB51                            --------->AHL20(2)                            <---------ICU4                            <---------AHL20(2)                      --------->YAB1                    <-----------GT1             ------------>CBF--------->AHL20(1)                                                    <-      --------->AHL20(2)   --------->ICU4                  <---------ANAC58                        <-      <---------AHL20(2)   <---------YAB1                 --------------->AtSPL3               <-----     <---------AHL20(2) <---------YAB1                    --------------->AtSPL8               <-----     --------->AHL20(2) --------->ICU4        <------------CBF--------->SPL7               <---------AHL20(2) --------->GT1    --------->AHL20(2)       <---------ATHB12<---------ANAC58               <---------AHL20(2) ------>CBF--------->YAB1<---------ICU4------------>CBF------>ZmHOX2a(1)           <---------YAB1  <-   aatgtaattttattcatcaatataacataattattttataatccaatggattgcatcctatgcgtaccatttctaacattttcttatgattttttatttg  6793500                                                                                --------->ATHB51                                                                            <-------TEIL                 -------->HAHB4                   <---------ARR11(3)      <-------MYC3                 <---------ICU4                   --------->AHL20(2)      <-------MYC2                 --------->ATHB51                 --------->AHL20(1)      ------->MYC3                 <--------ATHB1                   <---------AHL20(1)      ------->MYC2                <---------YAB1            ----------->GT1              ==============================           --------->YAB1                <---------------AtSPL8        --------->TGA1a          ----------->GT1                --------------->AtSPL8        <---------TGA1a     --------->HSFB2a(2)                >>>>>>>>>ARR2                  <---------O2     <---------HSFB2a(2)                >>>>>>>>>ARR1              <-----------HVH21 -----MYB46(1)  --------->ICU4          >>>>>>>>>ARR1              <-----------TGA1            <----- -----MYB83<------ZmHOX2a(1)            >>>>>>>>>ARR2           =================MYC_MYB      ------- ----MYB46(3)   <---------ATHB51       <------ZmHOX2a(1)        <---------At5g28300         --------- ------RAV1(1)--------->YAB1      <---------STY1(2)             -------->P------->MYC4   --------->ANAC58 --------MYB46(3)--------->ATHB12 --------->STY1(2)    <-----------GT1 --------->O2      --------->ANAC58   ttggtttgcagaaggataataattgaaatcggaactagctaggattgtacaaaatattaactaatctaccgtcacatgtgcataatttgcctagcaacat  6793600                                               <---------YAB1               <---------AHL20(1)      <--------ATHB1               --------->AHL20(1)      --------->YAB1      ----------->GT1                  --------->ATHB51                                      --------     --------->DAG2                    -------->ATHB1                                   ------>ZmHOX2a(1)   ---------->DOF2                     <---------ICU4                                  --------->TOE2(3) =============bZIP_DOF                --------->ICU4                                   --------->TOE1(3) ----ARR11(3)<---------AHL20(2)       <---------ATHB12                             --------->YAB1 -->REM1(1) --------->AHL20(2)        <---------YAB1                              <---------ATHB12  - -->RAV1(1)<---------YAB1             <---------ATHB51              --------->YAB1--------->ICU4 ----   ctaagaaaaggttattatatattagttttagttttggacaataattgttttgataaaacacaaacttcaaacataaaaacagcaataatccttaatcaga  6793700                                                                          --------->MYB52(1)                                                                     ------>NtERF2                                                                    --------->RRTF1(3)                                                                    --------->RAP2.3(2)                                                                    --------->DREB2C(2)                                                                    --------->DEAR3(1)                                                                    --------->RAP2.3(3)                                                                   --------->DEAR4(2)                                                                   --------->ATERF1(1)                                                                   <------NtERF2                                                                   --------->RAP2.3(1)                                                                   --------->ORA47(2)                         <---------------AtSPL3                    --------->DEAR3(2)                         --------------->AtSPL3                   ------>NtERF2               ------>MYB46(1)                                  --------->ATERF1(1)       --------------->AtSPL8                                   ------>NtERF2       <---------------AtSPL3                                  <---------ANAC58  <---------ATHB12       --------------->AtSPL8                <---------ATERF1(1) ->YAB1--------------->AtSPL3    ------>MYB46(1)               <---------ANAC58  --------->MYB52(1) - -------->WOX13(1)  <---------ATHB12               --------->DAG2 <---------ATERF1(1)               < ----->GLK1(2) ------>MYB83      ------>MYB83     ---------->DOF2<---------DEAR3(1)     ----------->GT1   atcaatgaggcagtacctcccaatgagacagtacctcccaattggagctagttaaagtggcaatgccgcgccgacttaagggctatcggctagaaaaaac  6793800  Previous    Next  AGI:  At5g20110.1    Description:  dynein light chain, putative. similar to dynein light chain type 1 family protein [Arabidopsis thaliana] (TAIR:AT1G23220.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63502.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65637.1); contains InterPro domain Dynein light chain, type 1 and 2; (InterPro:IPR001372) Range:  from: 6791489    to: 6793348    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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